Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 1,913,866 T→C 6.7% Y213C (TAT→TGT)  ytbE ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007301,913,8660TC 6.7% 181.8 / 3.3 60Y213C (TAT→TGT) ytbEhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (30/26);  new base C (2/2);  total (32/28)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01

TATTTTGATTATAATTTGAAATCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTAAATCTTTAAATTGACCGCCACTAATACC  >  CP000730/1913726‑1914002
                                                                                                                                            |                                                                                                                                        
tATTTTGATTATAATTTGAAATCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGaat                                                                                                                                          <  2:241091/141‑1 (MQ=255)
  ttttGATTATAATTTGAAATCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGaataa                                                                                                                                        <  2:106617/141‑1 (MQ=255)
  ttttGATTATAATTTGAAATCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGaataa                                                                                                                                        >  1:418867/1‑141 (MQ=255)
  ttttCATTATAATTTGAAACCGTTACATCGCCTTCATTTTTAAGACTAAAGAATAACATTGCAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTGTTCAGCCAATTGTTTAATCGCCTCACTTTCATCTGaataa                                                                                                                                        >  2:491441/1‑141 (MQ=255)
    ttGATTATAATTTGAAATCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAAtt                                                                                                                                      <  1:424973/141‑1 (MQ=255)
      gATTATAATTTGAAATCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTa                                                                                                                                    >  1:629953/1‑141 (MQ=255)
      gATTATAATTTGAAATCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTa                                                                                                                                    >  1:272802/1‑141 (MQ=255)
      gATTATAATTTGAAATCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAACAATTTa                                                                                                                                    >  1:26496/1‑141 (MQ=255)
      gATTATAATTTGAAATCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAACAATTTa                                                                                                                                    >  1:26493/1‑141 (MQ=255)
       aTTATAATTTCAAATCACTACATAGACTTCATTTTTAAGATTAAAGTATAATATTGAAGTTGGTGTATCTTTGGCGCTTAATTCTTTTTCTAAGTTTTCAGCCAATTTTTTAATCGCCTCAATTTGATCTGCATAATTTAc                                                                                                                                   <  2:377905/141‑1 (MQ=255)
         tataATTTGAAATCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACaa                                                                                                                                 <  1:214881/141‑1 (MQ=255)
            aaTTTGAAATCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATg                                                                                                                              <  2:696356/141‑1 (MQ=255)
             aTTTGAAATCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGa                                                                                                                             >  1:643207/1‑141 (MQ=255)
                 gAAATCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAAt                                                                                                                         <  2:562744/141‑1 (MQ=255)
                  aaaTCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATg                                                                                                                        <  2:622173/141‑1 (MQ=255)
                   aaTCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGa                                                                                                                       >  2:115554/1‑141 (MQ=255)
                    aTCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGaa                                                                                                                      >  2:429007/1‑141 (MQ=255)
                     tCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAAc                                                                                                                     >  1:113410/1‑141 (MQ=255)
                       gTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGt                                                                                                                   >  2:61758/1‑141 (MQ=255)
                         tACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCCATTTGATCTGAATAATTTACAAATGATAATGAACGttt                                                                                                                 <  2:351024/141‑1 (MQ=255)
                           cATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGt                                                                                                               >  1:290220/1‑141 (MQ=255)
                           cATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGt                                                                                                               >  2:161130/1‑141 (MQ=255)
                                ccTTCATTTTTAAGATTACACTATACCATCAACATGGGTGTATATCTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGtcatca                                                                                                          <  1:670839/141‑1 (MQ=255)
                                ccTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGtcatca                                                                                                          <  1:114465/141‑1 (MQ=255)
                                 cTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTcatcat                                                                                                         >  1:546223/1‑141 (MQ=255)
                                 cTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTcatcat                                                                                                         >  2:468978/1‑141 (MQ=255)
                                    cATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCAtttt                                                                                                      >  1:185831/1‑141 (MQ=255)
                                    cATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCAtttt                                                                                                      >  1:127261/1‑141 (MQ=255)
                                    cATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCAtttt                                                                                                      <  1:94127/141‑1 (MQ=255)
                                     aTTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTg                                                                                                     >  2:466725/1‑141 (MQ=255)
                                     aTTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTg                                                                                                     >  2:433846/1‑141 (MQ=255)
                                      tttttAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTACTCGCCTCACTTTGATCTGATTATTTTCACCATGAGAATGAACGTTTGTCATCATTTTgg                                                                                                    >  1:490868/1‑140 (MQ=255)
                                      tttttAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGaata                                                                                                                                         <  2:251913/104‑1 (MQ=255)
                                      tttttAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGaata                                                                                                                                         >  1:251913/1‑104 (MQ=255)
                                                        aaaaTTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGc                                                                                  <  1:17123/141‑1 (MQ=255)
                                                        aaaaTTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGc                                                                                  <  1:97793/141‑1 (MQ=255)
                                                         aaaTTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCg                                                                                 >  1:263747/1‑141 (MQ=255)
                                                           aTTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGt                                                                               <  1:171120/141‑1 (MQ=255)
                                                            ttGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTc                                                                              <  1:450927/141‑1 (MQ=255)
                                                                 gTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGAt                                                                         >  2:97810/1‑141 (MQ=255)
                                                                   tGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGAttt                                                                       >  2:700033/1‑141 (MQ=255)
                                                                     gtgtATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTAt                                                                     <  1:39698/141‑1 (MQ=255)
                                                                                gCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAAt                                                          >  1:142239/1‑141 (MQ=255)
                                                                                   ccTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTa                                                       <  1:50109/141‑1 (MQ=255)
                                                                                          cTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAACAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATa                                                <  2:26496/141‑1 (MQ=255)
                                                                                          cTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAACAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATa                                                <  2:26493/141‑1 (MQ=255)
                                                                                           tttttGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATAc                                               >  2:288112/1‑141 (MQ=255)
                                                                                           tttttGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATAc                                               >  1:450836/1‑141 (MQ=255)
                                                                                             tttGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACtt                                             >  1:612983/1‑141 (MQ=255)
                                                                                               tGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGt                                           <  1:487594/141‑1 (MQ=255)
                                                                                               tGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGt                                           <  1:419190/141‑1 (MQ=255)
                                                                                                      ttttaGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAGCGTTTTTCATCATTTTTATCCATCACAATAGTTTGAGGTCTAGATATATCTAAATCCAATGTATCAAATACTTGTTCCATtg                                    >  2:279711/5‑141 (MQ=255)
                                                                                                            ccAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTa                              <  2:629953/141‑1 (MQ=255)
                                                                                                            ccAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTa                              >  1:145661/1‑141 (MQ=255)
                                                                                                             cAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTaa                             <  2:113410/141‑1 (MQ=255)
                                                                                                             cAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTaa                             >  1:248297/1‑141 (MQ=255)
                                                                                                                  gTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTAAATCtt                        <  2:341718/141‑1 (MQ=255)
                                                                                                                  gTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTAAATCtt                        <  1:498864/141‑1 (MQ=255)
                                                                                                                     tAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTAAATCTTTaa                     >  2:123554/1‑141 (MQ=255)
                                                                                                                           ccTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTAAATCTTTAAATTGAc               <  2:106648/141‑1 (MQ=255)
                                                                                                                             tCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTAAATCTTTAAATTGACCg             <  1:492828/141‑1 (MQ=255)
                                                                                                                               aaTTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTAAATCTTTAAATTGACCGcc           >  2:305159/1‑141 (MQ=255)
                                                                                                                                aTTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTCTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTAAATCTTTAAATTGACCGCCa          >  1:458098/1‑141 (MQ=255)
                                                                                                                                  ttGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTAAATCTTTAAATTGACCGCCACt        <  2:234214/141‑1 (MQ=255)
                                                                                                                                  ttGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTAAATCTTTAAATTGACCGCCACt        >  1:144419/1‑141 (MQ=255)
                                                                                                                                        tGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTAAATCTTTAAATTGACCGCCACTAATAcc  <  2:546223/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                        
TATTTTGATTATAATTTGAAATCGTTACATCGCCTTCATTTTTAAGATTAAAGTATAAAATTGAAGTTGGTGTATATTTGGCACCTAATTCTTTTTGTAAGTCTTCAGCCAATTGTTTAATCGCCTCAATTTGATCTGAATAATTTACAAATGATAATGAACGTTTGTCATCATTTTGATCCATCACAATAGTTTGCGGTCTAGATTTATCTAAATCCAATGTATCAAATACTTGTTCCATTGGTGGTAAATCTTTAAATTGACCGCCACTAATACC  >  CP000730/1913726‑1914002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: