| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 431138 = | 63 (0.890) | 5 (0.080) | 5/250 | 9.3 | 7.6% | intergenic (+16/+65) | nfrA/tcyP | possible FMN reductase/possible DAACS family dicarboxylate/amino acid:sodium (Na+) or proton (H+) symporter |
| ? | CP000730 | 431188 = | 63 (0.960) | intergenic (+66/+15) | nfrA/tcyP | possible FMN reductase/possible DAACS family dicarboxylate/amino acid:sodium (Na+) or proton (H+) symporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGGTACAGGTACCGCCAAGTTAACTAAACATTGGGATAAAGATACTTTCGATTCAAATGATAATGCTGCATTAACTTCACACTAATTCATTGCAAGAAATACCCGCCCCCTCTAGCTATACTTATCATTTTAAGCTAGAGGGGGGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/431287‑431138‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggggcgggtATTTCTTGCAATGAATTAGTGTGAAGTTAATGCAGCATTATCATTTGAATCGAAAGTATCTTTATCCCAATGTTTAGTTAACTTGGCGGTACCTGTACCAGCTAGCATTGAATCGTTCACGTTTAATGCTGTTCTACC > CP000730/431188‑431325 TGGTAAAGGTACCGCCAAGTTAACTAAACATTGGGATAAAGATACTTTCGATTCAAATGATAATGCTGCATTAACTTCACACTAATTCATTGCAAGAAATACCCGCCCCCTCTAGCTATACTTATCATTTTAAGCTAGAGG < 2:435213/141‑1 CAGGTACCGCCAAGTTAACTAAACATTGGGATAAAGATACTTTCGATTCAAATGATAATGCTGCATTAACTTCACACTAATTCATTGCAAGAAATACCCGCCCCCTCTAGCTATACTTATCATTTTAAGCTAGAGGGGGGC > 2:420734/1‑141 GGTACCGCCAAGTTAACTAAACATTGGGATAAAGATACTTTCGATTCAAATGATAATGCTGCATTAACTTCACACTAATTCATTGCAAGAAATACCCGCCCCCTCTAGCTATACTTATCATTTTAAGCTAGAGGGGGGCGG < 2:820439/141‑1 GGTACCGCCAAGTTAACTAAACATTGGGATAAAGATACTTTCGATTCAAATGATAATGCTGCATTAACTTCACACTAATTCATTGCAAGAAATACCCGCCCCCTCTAGCTATACTTATCATTTTAAGCTAGAGGGGGGCGG < 1:525190/141‑1 GTACCGCCAAGTTAACTAAACATTGGGATAAAGATACTTTCGATTCAAATGATAATGCTGCATTAACTTCACACTAATTCATTGCAAGAAATACCCGCCCCCTCTAGCTATACTTATCATTTTAAGCTAGAGGGGGGCGGG < 2:11889/141‑1 GTACCGCCAAGTTAACTAAACATTGGGATAAAGATACTTTAGATTCAAATGATAATGCTGCATTAACTTCACACTAATTCATTGCAAGAAATACCCGCCCCCTCTAGCTATACTTATCATTTTAAGCTAGAGGGGGGCGGG < 2:26831/141‑1 TACCGCCAAGTTAACTAAACATTGGGATAAAGATACTTTCGATTCAAATGATAATGCTGCATTAACTTCACACTAATTCATTGCAAGAAATACCCGCCCCCTCTAGCTATACTTATCATTTTAAGCTAGAGGGGGGCGGGT < 2:107844/141‑1 CCCGCCCCCTCTAGCTATACTTATCATTTTAAGCTAGAGGGGGGCGGGTATTTCTTGCAATGAATTAGTGTGAAGTTAATGCAGCATTATCATTTGAATCGAAAGTATCTTTATCCCAATGTTTAGTTAACTTGGCGGTAC > 2:648434/1‑141 GCCCCCTCTAGCTATACTTATCATTTTAAGCTAGAGGGGGGCGGGTATTTCTTGCAATGAATTAGTGTGAAGTTAATGCAGCATTATCATTTGAATCGAAAGTATCTT < 2:36070/108‑1 GCCCCCTCTAGCTATACTTATCATTTTAAGCTAGAGGGGGGCGGGTATTTCTTGCAATGAATTAGTGTGAAGTTAATGCAGCATTATCATTTGAATCGAAAGTATCTT > 1:36070/1‑108 CTAGCTATACTTATCATTTTAAGCTAGAGGGGGGCGGGTATTTCTTGCAATGAATTAGTGTGAAGTTAATGCAGCATTATCATTTGAATCGAAAGTATCTTTATCCCAATGTTTAGTTAACTTGGCGGTACCTGTACCAGC > 2:186789/1‑141 CTATACTTATCATTTTAAGCTAGAGGGGGGCGGGTATTTCTTGCAATGAATTAGTGTGAAGCTAAGGCAGCATTATCATGTGAATCGAAAGTATCTTTATCCCAATGTTTAGTTAACTTGGCGGTACCTGTACCAGCTAGC > 1:800217/1‑141 GGGGCGGGTATTTCTTGCAATGAATTAGTGTGAAGTTAATGCAGCATTATCATTTGAATCGAAAGTATCTTTATCCCAATGTTTAGTTAACTTGGCGGTACCTGTACCAGCTAGCATTGAATCGTTCACGTTTAATGCTGT < 1:113106/141‑1 GGGGCGGGTATTTCTTGCAATGAATTAGTGTGAAGTTAATGCAGCATTATCATTTGAATCGAAAGTATCTTTATCCCAATGTTTAGTTAACTTGGCGGTACCTGTACCAGCTAGCATTGAATCGTTCACGTTTAATGCTGT < 1:90582/141‑1 GGCGGGTATTTCTTGCAATGAATTAGTGTGAAGGTAATGCAGCATTATCATTTGAATCGAAAGTATCTTTATCCCAATGTTTAGTTAACTTGTCGGTACCTTTACCAGCTAGCAGTGAAATGTTCACGTTGAATGCTGTTC > 1:208519/1‑141 GCGGGTATTTCTTGCAATGAATTAGTGTGAAGTTAATGCAGCATTATCATTTGAATCGAAAGTATCTTTATCCCAATGTTTAGTTAACTTGGCGGTACCTGTACCAGCTAGCATTGAATCGTTCACGTTTAATGCTGTTCT > 1:218015/1‑141 GGGTATTTCTTGCAATGAATTAGTGTGAAGTTAATGCAGCATTATCATTTGAATCGAAAGTATCTTTATCCCAATGTTTAGTTAACTTGGCGGTACCTGTACCAGCTAGCATTGAATCGTTCACGTTTAATGCTGTTCTAC > 2:127044/1‑141 GGTATTTCTTGCAATGAATTAGTGTGAAGTTAATGCAGCATTATCATTTGAATCGAAAGTATCTTTATCCCAATGTTTAGATAACTTGGCGGTACCTGTACCAGCTAGCATTGAATCGTTCACGTTTAATGCTGTTCTACC < 2:650189/141‑1 TGGTACAGGTACCGCCAAGTTAACTAAACATTGGGATAAAGATACTTTCGATTCAAATGATAATGCTGCATTAACTTCACACTAATTCATTGCAAGAAATACCCGCCCCCTCTAGCTATACTTATCATTTTAAGCTAGAGGGGGGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/431287‑431138‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggggcgggtATTTCTTGCAATGAATTAGTGTGAAGTTAATGCAGCATTATCATTTGAATCGAAAGTATCTTTATCCCAATGTTTAGTTAACTTGGCGGTACCTGTACCAGCTAGCATTGAATCGTTCACGTTTAATGCTGTTCTACC > CP000730/431188‑431325 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |