| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 613921 = | 30 (0.980) | 3 (0.110) | 3/248 | 4.4 | 9.7% | coding (2233/2844 nt) | sdrC | Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrC |
| ? | CP000730 | = 618390 | 28 (1.000) | coding (3492/4146 nt) | sdrD | Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrD | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/614070‑613921‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtctgaatcTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAATCGCTATCCGAGTCTGAATCACTATCTGAGTCTGAGTCTCTGTCTGAATCTGAGTCGCTGTCCGAATCTGAGTCGCTATCTGATGTTTCTTCTT < CP000730/618390‑618257 tgagTCTGAGTCGCTATCAGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCT > 1:67602/5‑141 TGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGA > 1:43532/1‑141 GCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGA > 2:58509/1‑141 CTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCCCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAATCGCTATCCGAGTCTGAATCACTATCTGAGTCTGAGTCTC > 2:234292/1‑141 aTCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGACTCTGAGTCGCTATCCGAGTCTGAATCACTATCTGAGTCTGAGTCTCTGTCTGAATCTGAGTCGCTGTCCGAATCTGAGTCGCTATC < 2:107427/140‑1 GTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAATCGCTATCCGAGTCTGAATCACTATCTGAGTCTGAGTCTCTGTCTGAATCTGAGTCGCTGTCCGAATCTGAGTCGCTATCTGATGTTTCTTC > 2:67854/1‑141 CTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAATCGCTATCCGAGTCTGAATCACTATCTGAGTCTGAGTCTCTGTCTGAATCTGAGTCGCTGTCCGAATCTGAGTCGCTATCTGATGTTTCTTCTT > 2:73979/1‑141 TGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/614070‑613921‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtctgaatcTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAATCGCTATCCGAGTCTGAATCACTATCTGAGTCTGAGTCTCTGTCTGAATCTGAGTCGCTGTCCGAATCTGAGTCGCTATCTGATGTTTCTTCTT < CP000730/618390‑618257 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |