| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 1878614 | 74 (0.840) | 4 (0.050) | 4/222 | NT | 5.4% | intergenic (+73/+44) | ytfP/fmtB1 | possible flavoprotein/cell surface anchored protein |
| ? | CP000730 | = 1878633 | 77 (1.010) | intergenic (+92/+25) | ytfP/fmtB1 | possible flavoprotein/cell surface anchored protein | |||||
TGGTTATAATATTACAAGTGCACTCGTAACAGGACATGTCGCTGGATTATATGCCGGACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/1878457‑1878614‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaatgaccttaatataacGACACTTTTTAGTGACTCAGTTATATTAAGGTCATTTTTATTTGAATGAAAAAGTTGATCTACTAAAGAGAATCGAACCAAATTTTATACTATTATTCCATTGATGCATGTGAGTAATGTCCGGCATATAATCCAGCG < CP000730/1878633‑1878496 TGGTTATAATATTACAAGTGCACTCGTAACAGGACATGTCGCTGGATTATATGCCGGACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAA > 1:614859/1‑141 ATAATATTACAAGTGCACTCGTAACATGACATGTCGGAAGATTATATGCCGTACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCAATAAAAAAAAAATGA < 2:223655/141‑1 ATAATATTACAAGTGCACTCGTAACAGGACATGTCGCTGGATTATATGCCGGACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGCTCAACTTTTTCATTCAAATAAAAATGA > 2:468372/1‑141 TAATATTACAAGTGCACTCGTAACAGGACATGTCGCTGGATTATATGCCGGACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGAC > 1:938954/1‑141 ATATTACAAGTGCACTCGTAACAGGACATGTCGCTGGATTATATGCCGGACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCGCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCT > 2:600749/1‑141 AGTGCACTCGTAACAGGACATGTCGCTGGATTATATGCCGGACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAA > 2:911632/1‑141 ATTATATGCCGGACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACGACACTTTTTAGTGACTCAGTTATATTA < 1:761270/141‑1 TATGCCGGACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACGACACTTTTTAGTGACTCAGTTATATTAAGGT < 1:691541/141‑1 ATGCCGGACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACGACACTTTTTAGTGACTCAGTTATATTAAGGTC < 1:984333/141‑1 TGCCGGACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACGACACTTTTTAGTGACTCAGTTATATTAAGGTCA < 2:569294/141‑1 AATGACCTTAATATAACGACACTTTTTAGTGACTCAGTTATATTAAGGTCATTTTTATTTGAATGAAAAAGTTGATCTACTAAAGAGAATCGAACCAAATTTTATACTATTATTCCATTGATGCATGTGAGTAATGTCCGG < 2:1004167/141‑1 AATGACCTTAATATAACGACACTTTTTAGTGACTCAGTTATATTAAGGTCATTTTTATTTGAATGAAAAAGTTGATCTACTAAAGAGAATCGAACCAAATTTTATACTATTATTCAATTGATGCATGTGAGTAATGTCCGG > 2:741507/1‑141 TGACCTTAATATAACGACACTTTTTAGTGACTCAGTTATATTAAGGTCATTTTTATTTGAATGAAAAAGTTGATCTACTAAAGAGAATCGAACCAAATTTTATACTATTATTCCATTGATGCATGTGAGTAATGTCCGGCA < 2:738403/141‑1 TGACCTTAATATAACGACACTTTTTAGTGACTCAGTTATATTAAGGTCATTTTTATTTGAATGAAAAAGTTGATCTACTAAAGAGAATCGAACCAAATTTTATACTATTATTCCATTGATGCATGTGAGTAATGTCCGGCA < 1:754938/141‑1 TGACCTTAATATAACGACACTTTTTAGTGACTCAGTTATATTAAGGTCATTTTTATTTGAATGAAAAAGTTGATCTACTAAAGAGAATCGAACCAAATTTTATACTATTATTCCATTGATGCATGTGAGTAATGTCCGGCA < 1:754886/141‑1 TGACCTTAATATAACGACACTTTTTAGTGACTCAGTTATATTAAGGTCATTTTTAATTGAATGAAAAAGTTGATCTACTAAAGAGAATCGAACCAAATTTTATACTATTATTCCATTGATGTATGTGAGTAATGACCGGCA < 1:128206/141‑1 GACCTTAATATAACGACACTTTTTAGTGACTCAGTTATATTAAGGTCATTTTTATTTGAATGAAAAAGTTGATCTACTAAAGAGAATCGAACCAAATTTTATACTATTATTCCATTGATGCATGTGAGTAATGTCCGGCAT < 2:999141/141‑1 CTTAATATAACGACACTTTTTAGTGATTCAGTTATATTAAGGTCATTTTTATTTGAATGAAAAAGTTGATCTACTAAAGAGAATCGAACGAAATTTTATACTATTATTCCATTGATGCATGTGTGTAATGTCGGGCATATA > 1:313097/1‑141 AACGACACTTTTTAGTGACTCAGTTATATTAAGGTCATTTTTATTTGAATGAAAAAGTTGATCTACTAAAGAGAATCGAACCAAATTTTATACTATTATTCCATTGATGCATGTGAGTAATGTCCGGCATATAATCCAGCG < 1:897415/141‑1 AACGACACTTTTTAGTGACTCAGTTATATTAAGGTCATTTTTATTTGAATGAAAAAGTTGATCTACTAAAGAGAATCGAACCAAATTTTATACTATTATTCCATTGATGCATGTGAGTAATGTCCGGCATATAATCCAGCG < 1:388628/141‑1 TGGTTATAATATTACAAGTGCACTCGTAACAGGACATGTCGCTGGATTATATGCCGGACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/1878457‑1878614‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaatgaccttaatataacGACACTTTTTAGTGACTCAGTTATATTAAGGTCATTTTTATTTGAATGAAAAAGTTGATCTACTAAAGAGAATCGAACCAAATTTTATACTATTATTCCATTGATGCATGTGAGTAATGTCCGGCATATAATCCAGCG < CP000730/1878633‑1878496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |