| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2757647 = | 106 (1.200) | 4 (0.050) | 4/246 | NT | 3.8% | coding (1735/1851 nt) | nrdD | anaerobic ribonucleotide reductase large subunit |
| ? | CP000730 | 2757704 = | 101 (1.200) | coding (1678/1851 nt) | nrdD | anaerobic ribonucleotide reductase large subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACTACTCTTATGACAAAGTTGGTTACTTAGGTACAAATATTCCGATTGATCATTGTTATGAATGTGATTACGATGGAGATTTTGAAGCAACTGAAAAAGGATTTAAATGCCCGAACTGTGGCAATGATAATCCTAAAACAGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2757790‑2757647‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagttgCTTCAAAATCTCCATCGTAATCACATTCATAACAATGATCAATCGGAATATTTGTACCTAAGTAACCAACTTTGTCATAAGAGTAGTCCCATACCGCTTCTAGTGCTTTCAAATTGTGTTGCAATTTCGGATACTCAC > CP000730/2757704‑2757841 ACTACTCTTATGACAAAGTTGGTTACTTAGGTACAAATATTCCGATTGATCATTGTTATGAATGTGATTACGATGGAGATTTTGAAGCAACTGAAAAAGGATTTAAATGCCCGAACTGTGGCAATGATAATCCTAAAACAG > 2:367490/1‑141ACTACTCTTATGACAAAGTTGGTTACTTAGGTACAAATATTCCGATTGATCATTGTTATGAATGTGATTACGATGGAGATTTTGAAGCAACTGAAAAAGGATTTAAATGCCCGAACTGTGGCAATGATAATCCTAAAACAG > 2:259394/1‑141 CTACTCTTATGACAAAGTTGGTTACTTAGGTACAAATATTCCGATTGATCATTGTTATGAATGTGATTACGATGGAGATTTTGAAGCAACTGAAAAAGGATTTAAATGCCCGAACTGTGGCAATGATAATCCTAAAACAGT > 1:484905/1‑141 GAAAAAGGATTTAAATGCCCGAACTGTGGCAATGATAATCCTAAAACAGTTGCTTCAAAATCTCCATCGTAATCACATTCATAACAATGATCAATCGGAATATTTGTACCTAAGTAACCAACTTTGTCATAAGAGTAGTCC > 1:618483/1‑141 GATTTAAATGCCCGAACTGTGGCAATGATAATCCTAAAACAGTTGCTTCAAAATCTCCATCGTAATCACATTCATAACAATGATCAATCGGAATATTTGTACCTAAGTAACCAACTTTGTCATAAGAGTAGTCCCATACCG > 1:23331/1‑141 TTAAATGCCCGAACTGTGGCAATGATAATCCTTTTTCAGTTGCTTCAAAATCTCCATCGTAATCACATTCATAACAATGATCAATCGGAATATTTGTACCTAAGTAACCAACTTTGTCATAAGAGTAGTCCCATACCGCTT > 2:818088/1‑141 AATGATAATCCTAAAACAGTTGCTTCAAAATCTCCATCGTAATCACATTCATAACAATGATCAATCGGAATATTTGTACCTAAGTAACCAACTTTGTCATAAGAGTAGTCCCATACCGCTTCTAGTGCTTTCAAATTGTGT < 2:618483/141‑1 TTGCTTCAAAATCTCCATCGTAATCACATTCATAACAATGATCAATCGGAATATTTGTACCTAAGTAACCAACTTTGTCATAAGAGTAGTCCCATACCGCTTCTAGTGCTTTCAAATTGTGTTGCAATTTCGGATACTCAC < 2:845082/141‑1 ACTACTCTTATGACAAAGTTGGTTACTTAGGTACAAATATTCCGATTGATCATTGTTATGAATGTGATTACGATGGAGATTTTGAAGCAACTGAAAAAGGATTTAAATGCCCGAACTGTGGCAATGATAATCCTAAAACAGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2757790‑2757647‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagttgCTTCAAAATCTCCATCGTAATCACATTCATAACAATGATCAATCGGAATATTTGTACCTAAGTAACCAACTTTGTCATAAGAGTAGTCCCATACCGCTTCTAGTGCTTTCAAATTGTGTTGCAATTTCGGATACTCAC > CP000730/2757704‑2757841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |