New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1843478	53 (0.600)	3 (0.040)	3/240	NT	5.4%	intergenic (‑162/‑220)	tyrS/sgtA	tyrosine‑‑tRNA ligase/possible transglycosylase
	?	CP000730	= 1843483	55 (0.670)					intergenic (‑167/‑215)	tyrS/sgtA	tyrosine‑‑tRNA ligase/possible transglycosylase

TTATTTATTGAATACTTGTTAAAATACTTTAAAGTTTTTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTGTCCTTTTATCCTATTCTTTATGCATT  >  CP000730/1843339‑1843617                                                                                                                                            |                                                                                                                                            ttatttatTGAATACTTGTTAAAATACTTTAAAGTTTTTTTTTTTTATTAAAAACCAATACAACAAATATGTAATGGCGCGATTTTACGTTAACACCAAACTTAAACATAATCATAAGATCATTTTCACTCTATTAATGAt                                                                                                                                            >  2:444270/1‑141 (MQ=255) ttatttatTGAATACTTGTTAAAATACTTTAAAGTTTTTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGAt                                                                                                                                            <  1:111960/141‑1 (MQ=255)    tttattGAATACTTGTTAAAATACTTTAAAGTTTTTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACg                                                                                                                                         <  1:530707/141‑1 (MQ=255)     ttattGAATACTTGTTAAAATACTTTAAAGTTATTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGt                                                                                                                                        <  2:103059/141‑1 (MQ=255)       attGAATACTTGTTAAAATACTTTAAAGTTTTTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGAacgtatc                                                                                                                                      <  2:15761‑M1/141‑8 (MQ=255)          gAATACTTGTTAAAATACTTTAAAGTTTTTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTtcatt                                                                                                                                   <  1:720698‑M2/141‑6 (MQ=255)          gAATACTTGTTAAAATACTTTAAAGTTTTTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTtcatt                                                                                                                                   <  1:979519‑M2/141‑6 (MQ=255)            aTACTTGTTAAAATACTTTAAAGTTTTTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTtcattaa                                                                                                                                 >  2:442943‑M2/1‑134 (MQ=255)              aCTTGTTAAAATACTTTAAAGTTTTTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTtcattaata                                                                                                                               >  1:396835‑M2/1‑132 (MQ=255)                 tGTTAAAATACTTTAAAGTTTTTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATaaat                                                                                                                            >  1:80233/1‑140 (MQ=255)                   ttAAAATACTTTAAAGTTTTTTGAACGT‑TAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTa                                                                                                                         >  2:927663/1‑141 (MQ=255)                    tAAAATACTTTAAAGTTTTTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTa                                                                                                                         >  2:410590/1‑141 (MQ=255)                        aTACTTTAAAGTTTTTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGAc                                                                                                                     <  1:931871/141‑1 (MQ=255)                            tttAAAGTTTTTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATgt                                                                                                                 <  1:1016428/141‑1 (MQ=255)                             ttAAAGTTTTTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATgtt                                                                                                                <  2:592513/141‑1 (MQ=255)                                aatttttttGAACGTAAAAAAATCCCTTATAACAATTATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATgttagt                                                                                                             <  1:314212/138‑1 (MQ=255)                                    tttttGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTtata                                                                                                         <  2:576450/141‑1 (MQ=255)                                        tGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAgg                                                                                                     <  1:774636/141‑1 (MQ=255)                                            cGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAGTCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTa                                                                                                 <  2:412143/141‑1 (MQ=255)                                            cGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGTACATGTTAGTTATAAAGGTGTa                                                                                                 >  2:685224/1‑141 (MQ=255)                                              tAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTAtt                                                                                               <  2:938912/141‑1 (MQ=255)                                              tAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTAtt                                                                                               <  2:1082536/141‑1 (MQ=255)                                              tAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTAtt                                                                                               <  1:126974/141‑1 (MQ=255)                                              tAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTAtt                                                                                               >  1:841488/1‑141 (MQ=255)                                               aaaaaaaaCCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTc                                                                                              >  1:383136/1‑141 (MQ=255)                                                aaaaaaaCCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGA‑ACGTatcattaatagagtgaacattatcttatgattatgtttaagttt                                                                                            >  1:456620‑M2/1‑97 (MQ=255)                                                  aaaaaCCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCata                                                                                           >  1:440378/1‑141 (MQ=255)                                                        ccTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATAttatta                                                                                     <  1:968034/141‑1 (MQ=255)                                                          ttACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGA‑ACGTatcattaatagagtgaacattatcttatgattatgtttaagtttggtggtaacg                                                                                  >  2:998841‑M2/1‑87 (MQ=255)                                                           tACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTaaaa                                                                                  <  1:26888/141‑1 (MQ=255)                                                           tACAACAAATATGTAAGGGCGCGAGTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTaaaa                                                                                  <  1:679277/141‑1 (MQ=255)                                                             caacaaATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAac                                                                                <  2:46303/141‑1 (MQ=255)                                                              aacaaATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAaca                                                                               <  2:589072/141‑1 (MQ=255)                                                               tatttgttGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAacac                                                                              >  1:759460/8‑141 (MQ=255)                                                                 aaaTATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTa                                                                            <  2:345684/141‑1 (MQ=255)                                                                 aaaTATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTa                                                                            <  2:701760/141‑1 (MQ=255)                                                                   atatGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGt                                                                          >  1:1002869/1‑141 (MQ=255)                                                                    tatGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGtt                                                                         <  2:1047830/141‑1 (MQ=255)                                                                             gcgcGATTGCACGTTACCGCCAAATATAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACACGTTCGGTATAAATGTGTATTCCTATTATTAAAAA‑ACTAGTTCACAGCGAcc                                                               <  2:101793/141‑1 (MQ=255)                                                                                cgATTGCACGTTACCACCAAACTTAAACAAAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCAc                                                             <  1:56295/141‑1 (MQ=255)                                                                                   ttGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGAGACAATCTTGATTAGGCGTTGGTGTTGTAAGTTATATGGGTGTATGCATATGATTAAAAACACGAGTTCACGGCGACCACTAg                                                          >  1:376970/1‑141 (MQ=255)                                                                                    tGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACTTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGc                                                         <  1:293022/141‑1 (MQ=255)                                                                                        cGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGAtacgttcattaatagagtgaacattatcttatgattatgtttaagtttggtggtaacgtgcaatcgcgcccttacatatttgttgtaa                                                     >  2:998841‑M1/1‑53 (MQ=255)                                                                                        cGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGctctc                                                     >  2:567320/1‑141 (MQ=255)                                                                                            accaccAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCtgat                                                 <  1:475864/141‑1 (MQ=255)                                                                                              caccaAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCtgatga                                               >  2:607070/1‑141 (MQ=255)                                                                                              caccaAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCtgatga                                               <  1:723314/141‑1 (MQ=255)                                                                                                 caAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGAttt                                            <  1:439390/141‑1 (MQ=255)                                                                                                  aaaCTTAAACATAATCATAAGATAATGTTCACTCTATTAATGAtacgttcattaatagagtgaacattatcttatgattatgtttaagtttggtggtaacgtgcaatcgcgcccttacatatttgttgtaagggttttttt                                           >  1:456620‑M1/1‑43 (MQ=255)                                                                                                      ttAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAaat                                       <  2:366177/141‑1 (MQ=255)                                                                                                        aaaCATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAaataa                                     >  2:251539/1‑141 (MQ=255)                                                                                                         aaCATAATCATAAGATAATGTTCACTCTATTAATGATACGTTAATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAaataat                                    >  2:1053874/1‑141 (MQ=255)                                                                                                               aTCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACt                              >  1:92027/1‑141 (MQ=255)                                                                                                               aTCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACt                              >  1:91937/1‑141 (MQ=255)                                                                                                               aTCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACt                              >  2:747013/1‑141 (MQ=255)                                                                                                                 cATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTg                            >  2:366130/1‑141 (MQ=255)                                                                                                                 cATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTg                            >  1:129277/1‑141 (MQ=255)                                                                                                                     aGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTGTCCt                        <  1:598173/141‑1 (MQ=255)                                                                                                                          aTGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTGTCCTTTTAt                   <  2:624951/141‑1 (MQ=255)                                                                                                                           tGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTATCTGATGATTTCAAATAATATTACTTGTCCTTTTATc                  >  1:830928/1‑141 (MQ=255)                                                                                                                            gTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTGTCATTTTATcc                 <  1:1043625/141‑1 (MQ=255)                                                                                                                              tCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTGTCCTTTTATCCTa               <  2:689038/141‑1 (MQ=255)                                                                                                                                    tATTAATGAacgtatcattaatagagtgaacattatcttatgattatgtttaagtttggtggtaacgtgcaatcgcgcccttacatatttgttgtaagggttttttttacgttcaaaaaactttaaagtattttaacaagt         >  1:396835‑M1/1‑9 (MQ=255)                                                                                                                                      ttAATGAacgtatcattaatagagtgaacattatcttatgattatgtttaagtttggtggtaacgtgcaatcgcgcccttacatatttgttgtaagggttttttttacgttcaaaaaactttaaagtattttaacaagtat       >  2:442943‑M1/1‑7 (MQ=255)                                                                                                                                      ttAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTGTCCTTTTATCCTATTCTTTAt       <  1:234347/141‑1 (MQ=255)                                                                                                                                      ttAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTGTCCTTTTATCCTATTCTTTAt       <  1:1001160/141‑1 (MQ=255)                                                                                                                                      ttAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTGTCCTTTTATCCTATTCTTTAt       >  1:579468/1‑141 (MQ=255)                                                                                                                                       tAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTGTCCTTTTATCCTATTCTTTATg      <  2:1074187/141‑1 (MQ=255)                                                                                                                                        aaTGAacgtatcattaatagagtgaacattatcttatgattatgtttaagtttggtggtaacgtgcaatcgcgcccttacatatttgttgtaagggttttttttacgttcaaaaaactttaaagtattttaacaagtattc     <  1:720698‑M1/141‑137 (MQ=255)                                                                                                                                        aaTGAacgtatcattaatagagtgaacattatcttatgattatgtttaagtttggtggtaacgtgcaatcgcgcccttacatatttgttgtaagggttttttttacgttcaaaaaactttaaagtattttaacaagtattc     <  1:979519‑M1/141‑137 (MQ=255)                                                                                                                                        aaTGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTGTCCTTTTATCCTATTCTTTATGc     <  2:614778/141‑1 (MQ=255)                                                                                                                                          tGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTGTCCTTTTATCCTATTCTTTATGCac   >  1:944329/1‑140 (MQ=255)                                                                                                                                          tGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTGTCCTTTTATCCTATTCTTTATGCAt   >  2:449343/1‑141 (MQ=255)                                                                                                                                           gATACGTtcattaatagagtgaacattatcttatgattatgtttaagtttggtggtaacgtgcaatcgcgcccttacatatttgttgtaagggttttttttacgttcaaaaaactttaaagtattttaacaagtattcaat  <  2:15761‑M2/141‑135 (MQ=255)                                                                                                                                            |                                                                                                                                            TTATTTATTGAATACTTGTTAAAATACTTTAAAGTTTTTTGAACGTAAAAAAAACCCTTACAACAAATATGTAAGGGCGCGATTGCACGTTACCACCAAACTTAAACATAATCATAAGATAATGTTCACTCTATTAATGATACGTTCATTAATAAACGTAGGACATGTTAGTTATAAAGGTGTATTCATATTATTAAAAACACTAGTTCACAGCGACCACTAGCTCTCTGATGATTTCAAATAATATTACTTGTCCTTTTATCCTATTCTTTATGCATT  >  CP000730/1843339‑1843617

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.