New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1676788	77 (0.870)	5 (0.060)	5/254	NT	6.2%	intergenic (‑894/‑75)	USA300HOU_1565/glyS	hypothetical protein/glycine‑‑tRNA ligase
	?	CP000730	= 1676835	75 (0.860)					intergenic (‑941/‑28)	USA300HOU_1565/glyS	hypothetical protein/glycine‑‑tRNA ligase

AAAATAAAAGCGAGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTACGGTGGTTTATCAAACACATGGGATTATGGTCCTTTAGG  >  CP000730/1676695‑1676975                                                                                                                                             |                                                                                                                                             aaaataaaaGCGAGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTGATTTTGTATTGTATACAGTTTAAATTTTTAACTCGTCCGATGGAAGTAAAGCATAGTTACGATGCTGTTATTTTCCATgggg                                                                                                                                              >  1:918686/1‑141 (MQ=255)   aaTAAAAGCGAGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGcg                                                                                                                                            >  2:28359‑M2/1‑139 (MQ=255)     taaaaGCGAGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGtt                                                                                                                                          <  2:341851/141‑1 (MQ=255)     taaaaGCGAGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGtt                                                                                                                                          >  2:364671/1‑141 (MQ=255)      aaaaGCGAGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGttt                                                                                                                                         <  1:962287/141‑1 (MQ=255)       aaaGCGAGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGtttt                                                                                                                                        <  1:364671/141‑1 (MQ=255)        aaGCGAGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTc                                                                                                                                       <  2:488277/141‑1 (MQ=255)        aaGCGAGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTc                                                                                                                                       <  1:834852/141‑1 (MQ=255)         aGCGAGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCa                                                                                                                                      <  1:67838/141‑1 (MQ=255)          gCGAGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCACATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCAt                                                                                                                                     <  1:783180/141‑1 (MQ=255)            gAGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGt                                                                                                                                   <  1:151395/141‑1 (MQ=255)             aGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTa                                                                                                                                  <  2:665086/141‑1 (MQ=255)             aGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTa                                                                                                                                  <  1:924900/141‑1 (MQ=255)              gTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTAt                                                                                                                                 >  2:689385/1‑141 (MQ=255)              gTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTAt                                                                                                                                 >  1:466810/1‑141 (MQ=255)              gTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTAt                                                                                                                                 >  2:22666/1‑141 (MQ=255)               tGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACACTTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATg                                                                                                                                >  1:476194/1‑141 (MQ=255)                    acacTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATgaggag                                                                                                                           >  2:569184/1‑141 (MQ=255)                     cacTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGgaga                                                                                                                          <  2:635279/141‑1 (MQ=255)                      acTAATTTGGGTGGAACCTCGGGTTAAAAACTTAACTTATGTTTTATTTTTTACAATTTAAAATATTTACTCTTCTCATTGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGagag                                                                                                                         <  1:158165/141‑1 (MQ=255)                      acTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGagag                                                                                                                         <  2:330710/141‑1 (MQ=255)                      acTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGagag                                                                                                                         <  1:720419/141‑1 (MQ=255)                        tAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGt                                                                                                                       >  2:912774/1‑141 (MQ=255)                          aTTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTaa                                                                                                                     >  1:128427/1‑141 (MQ=255)                           tttGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGaaaa                                                                                                                    <  2:192801/141‑2 (MQ=255)                              gggTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGGGAGGTAATTAt                                                                                                                 >  2:2931/1‑141 (MQ=255)                               ggTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATg                                                                                                                >  2:978013/1‑141 (MQ=255)                                 tttaaCCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGc                                                                                                              <  1:324800/138‑1 (MQ=255)                                 tGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGc                                                                                                              >  2:168826/1‑141 (MQ=255)                                 tGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGc                                                                                                              >  1:428270/1‑141 (MQ=255)                                  ggAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCa                                                                                                             <  1:1015826/141‑1 (MQ=255)                                     aCCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCaaaa                                                                                                          >  2:251351/1‑141 (MQ=255)                                       cgcgGGTTAAATACGTAACTTATTTTGTATTATCTACCATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGa                                                                                                        >  1:846144/1‑141 (MQ=255)                                         cgGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGata                                                                                                      >  1:479138/1‑141 (MQ=255)                                          gggTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGatat                                                                                                     >  1:939656/1‑141 (MQ=255)                                           ggTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATg                                                                                                    <  1:790244/141‑1 (MQ=255)                                              tAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAACGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGAt                                                                                                 <  1:215409/141‑1 (MQ=255)                                              tAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGAt                                                                                                 <  1:76922/141‑1 (MQ=255)                                               aaaTACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGTGGCAATTATGGCAAAAGATATGGATa                                                                                                >  2:860054/1‑141 (MQ=255)                                               aaaTACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATa                                                                                                <  1:394341/141‑1 (MQ=255)                                               aaaTACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATa                                                                                                >  1:113447/1‑141 (MQ=255)                                                 aTACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACa                                                                                              <  1:966638/141‑1 (MQ=255)                                                    cGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAAtt                                                                                           <  1:182238/141‑1 (MQ=255)                                                      tAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGt                                                                                         >  2:518682/1‑141 (MQ=255)                                                       aaCTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGtt                                                                                        >  1:588441/1‑141 (MQ=255)                                                          ttATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCGTATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGtttta                                                                                     >  1:722914/1‑139 (MQ=255)                                                                 gTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCaa                                                                              <  1:589093/141‑1 (MQ=255)                                                                 gTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCaa                                                                              <  2:736521/141‑1 (MQ=255)                                                                 gTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCaa                                                                              <  2:1009963/141‑1 (MQ=255)                                                                  tattatATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCaaa                                                                             >  1:324122/1‑141 (MQ=255)                                                                      atatcCAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAacac                                                                         <  1:1042190/141‑1 (MQ=255)                                                                      atataCAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATGTTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAacac                                                                         <  2:1027366/141‑1 (MQ=255)                                                                      atataCAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAacac                                                                         >  1:698668/1‑141 (MQ=255)                                                                      atataCAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAacac                                                                         <  2:202308/141‑1 (MQ=255)                                                                        ataCAATTTAAAAGATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCANAAGNTATGGATACAATTGTTTCATTAGCAAAACACag                                                                       <  1:864615/141‑1 (MQ=255)                                                                           cAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGCATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGATTCATTAGCAAAACACAGAgg                                                                    >  1:582897/1‑141 (MQ=255)                                                                                tAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGcgagttaatattttaaattgtatataatacaaaataagttacgtatttaacccgcggttccacccaaattagtgtagtc                                                               <  1:657756‑M2/141‑80 (MQ=255)                                                                                tAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTtg                                                               <  2:611267/141‑1 (MQ=255)                                                                                tAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTCTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTtg                                                               <  1:809846/141‑1 (MQ=255)                                                                                  aaaTATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAAcacaaaacctctgtg                                                             <  1:675741/141‑12 (MQ=255)                                                                                   aaTATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTgtgt                                                            >  2:982720/1‑141 (MQ=255)                                                                                   aaTATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTgtgt                                                            <  2:588441/141‑1 (MQ=255)                                                                                   aaTATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTgtgt                                                            >  1:601313/1‑141 (MQ=255)                                                                                   aaTATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTgtgt                                                            <  2:48699/141‑1 (MQ=255)                                                                                   aaTATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGACAGGCCTGAGCGATAATCAAAACACAGAGGTTTTgtgt                                                            <  2:48529/141‑1 (MQ=255)                                                                                            tCGCCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTa                                                   <  1:697989/141‑1 (MQ=255)                                                                                             cGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAg                                                  <  1:21285/141‑1 (MQ=255)                                                                                                cccATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCAGTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGa                                               <  1:785742/141‑1 (MQ=255)                                                                                                  cATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGata                                             <  1:795724/141‑1 (MQ=255)                                                                                                   aTGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGatat                                            <  1:734595/141‑1 (MQ=255)                                                                                                     ggAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATAttt                                          >  2:208073/1‑141 (MQ=255)                                                                                                       aaGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGcgagttaatattttaaattgtatataatacaaaataagttacgtatttaacccgcggttccacccaaattagtgtagtcaaccgcttttattttaaaatgat                                        <  2:927654‑M2/141‑103 (MQ=255)                                                                                                       aaGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTAc                                        <  2:638388/141‑1 (MQ=255)                                                                                                        aGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAACAGATATGGATACAAATGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGTTAGTGATATTTACg                                       >  2:515720/1‑141 (MQ=255)                                                                                                        aGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTACg                                       <  1:251351/141‑1 (MQ=255)                                                                                                        aGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGAcgagttaatattttaaattgtatataatacaaaataagttacgtatttaacacgcggttccacccaaattagtgtagtcactcgcttttattttaaaatgatt                                       <  2:329074‑M2/141‑104 (MQ=255)                                                                                                         gTAAAGCATATTTACTATGCTGTTATTTTCCATGGGAcgagttaatattttaaattgtatataatacaaaataagttacgtatttaacccgcggttccacccaaattagtgtagtcactcgcttttattttaaaatgattc                                      <  1:802775‑M2/141‑105 (MQ=255)                                                                                                          tAAAGCATATTTACTATGCTGTTATTTTCCATGGGAcgagttaatattttaaattgtatataatacaaaataagttacgtatttaacccgcggttccacccaaattagtgtagtcactcgcttttattttaaaatnattcg                                     <  1:72102‑M2/141‑106 (MQ=255)                                                                                                           aaaGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTACggtg                                    >  1:22477/1‑141 (MQ=255)                                                                                                              gcatagtaaatATGCTGTTATTTTCCATGGGGCAGTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTACGGTGGtt                                 >  2:322956/11‑141 (MQ=255)                                                                                                                   tttACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCGTTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTACGGTGGTTTATCa                            >  2:108960/1‑141 (MQ=255)                                                                                                                   tttACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTACGGTGGTTTATCa                            >  1:406766/1‑141 (MQ=255)                                                                                                                    ttACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATGGTTTCCATAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTACGGTGGTTTATCaa                           >  2:963894/1‑141 (MQ=255)                                                                                                                        tATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTACGGTGGTTTATCAAacac                       >  2:106274/1‑141 (MQ=255)                                                                                                                          tGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTACGGTGGTTTATCAAACACAt                     <  2:726493/141‑1 (MQ=255)                                                                                                                               ttATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTACGGTGGTTTATCAAACACATGGGAt                <  1:92870/141‑1 (MQ=255)                                                                                                                                    ttCCATGGGGCGTTTTCATGTCTGAGGAGAGGTAATCATGGCAAACGATATGGATACAATCGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATCTTTACGGTGGTTTATCAAACACATGGGATTATgg           >  2:228098/1‑141 (MQ=255)                                                                                                                                       cATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTACGGTGGTTTATCAAACACATGGGATTATGGTcc        >  2:282237/1‑141 (MQ=255)                                                                                                                                           gggCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTACGGTGGTTTATCAAACACATGGGATTATGGTCCTTTa    >  1:807156/1‑141 (MQ=255)                                                                                                                                             gCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTACGGTGGTTTATCAAACACATGGGATTATGGTCCTTTAgg  >  2:652097/1‑141 (MQ=255)                                                                                                                                             |                                                                                                                                             AAAATAAAAGCGAGTGACTACACTAATTTGGGTGGAACCGCGGGTTAAATACGTAACTTATTTTGTATTATATACAATTTAAAATATTAACTCGTCCCATGGAAGTAAAGCATATTTACTATGCTGTTATTTTCCATGGGGCGTTTTCATGTATGAGGAGAGGTAATTATGGCAAAAGATATGGATACAATTGTTTCATTAGCAAAACACAGAGGTTTTGTGTTCCCTGGTAGTGATATTTACGGTGGTTTATCAAACACATGGGATTATGGTCCTTTAGG  >  CP000730/1676695‑1676975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.