Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 1,052,403 G→A 5.5% D335D (GAC→GAT)  sspB ← C47 family staphopain B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007301,052,4030GA 5.5% 253.0 / 2.4 81D335D (GAC→GAT) sspBC47 family staphopain B
Reads supporting (aligned to +/- strand):  ref base G (33/43);  new base A (2/3);  total (35/46)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01

AATGATAAATGTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCAT  >  CP000730/1052269‑1052543
                                                                                                                                      |                                                                                                                                            
aaTGATAAATGTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCGTTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTa                                                                                                                                        >  1:199676/1‑141 (MQ=255)
aaTGATAAATGTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTa                                                                                                                                        <  1:336098/141‑1 (MQ=255)
aaTGATAAATGTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTa                                                                                                                                        >  1:908269/1‑141 (MQ=255)
aaTGATAAATGTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTa                                                                                                                                        >  2:190179/1‑141 (MQ=255)
aaTGATAAATGTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTa                                                                                                                                        >  1:689782/1‑141 (MQ=255)
 aTGATAAATGTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAg                                                                                                                                       <  1:458076/141‑1 (MQ=255)
 aTGATAAATGTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAg                                                                                                                                       >  1:381312/1‑141 (MQ=255)
  tGATAAATGTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAgg                                                                                                                                      <  2:454186/141‑1 (MQ=255)
  tGATAAATGTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAgg                                                                                                                                      >  2:113973/1‑141 (MQ=255)
    aTAAATGTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGt                                                                                                                                    <  2:190413/141‑1 (MQ=255)
       aaTGTAATAGGCTTGGAGCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAGTTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGtttt                                                                                                                                 <  1:719578/141‑1 (MQ=255)
          gTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTgag                                                                                                                              >  1:880499/1‑141 (MQ=255)
          gTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTgag                                                                                                                              >  1:736285/1‑141 (MQ=255)
          gTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTgag                                                                                                                              >  1:736294/1‑141 (MQ=255)
                ggCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATacac                                                                                                                        <  2:791516/141‑1 (MQ=255)
                ggCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATacac                                                                                                                        <  1:719281/141‑1 (MQ=255)
                ggCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATacac                                                                                                                        <  1:797027/141‑1 (MQ=255)
                  cTTGAATCTGCATCTTGGATTGATCATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACtt                                                                                                                      >  1:606831/1‑141 (MQ=255)
                       aTCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGc                                                                                                                 <  1:5054/141‑1 (MQ=255)
                       aTCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGc                                                                                                                 <  1:4881/141‑1 (MQ=255)
                       aTCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTGTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATGAGGGTTTTGAGATACACTTTGTGc                                                                                                                 <  2:349499/141‑1 (MQ=255)
                        tCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCa                                                                                                                >  1:1018665/1‑141 (MQ=255)
                        tCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCa                                                                                                                <  1:360533/141‑1 (MQ=255)
                         cTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCaa                                                                                                               >  1:180673/1‑141 (MQ=255)
                           gCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAgg                                                                                                             <  2:727739/141‑1 (MQ=255)
                               cTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCa                                                                                                         <  1:627604/141‑1 (MQ=255)
                               cTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCa                                                                                                         <  2:879020/141‑1 (MQ=255)
                                      tGATAATTCTGTAGCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTcc                                                                                                  >  2:154156/1‑141 (MQ=255)
                                       gATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCt                                                                                                 <  2:121356/141‑1 (MQ=255)
                                       gATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCt                                                                                                 <  1:698744/141‑1 (MQ=255)
                                         tAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTAc                                                                                               <  1:163718/141‑1 (MQ=255)
                                         tAATACTGTATCCCAAGGATTCCAGTAAATAAGTGTTTCTTGGTCATTAATTTTAGCATTACCAACAGCTGCTAGCGCATGTCATAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTAc                                                                                               <  2:218798/141‑1 (MQ=255)
                                           aTTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACAt                                                                                             <  2:908269/141‑1 (MQ=255)
                                            ttCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACAtt                                                                                            <  2:452355/141‑1 (MQ=255)
                                              cTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTAt                                                                                          >  2:650552/1‑141 (MQ=255)
                                                gTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCt                                                                                        >  2:207098/1‑141 (MQ=255)
                                                 tATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCtt                                                                                       <  2:1023058/141‑1 (MQ=255)
                                                 tATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCtt                                                                                       <  1:730089/141‑1 (MQ=255)
                                                  aTCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGGGCATGTCCTAAATGTGGATCATTAGGGTTTTGAGATACACTTTGTGCAAGAATCATAATTCCTACATTATCttt                                                                                      <  2:788744/141‑1 (MQ=255)
                                                   tCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCtttt                                                                                     <  1:584351/141‑1 (MQ=255)
                                                    cccAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTg                                                                                    <  2:185995/141‑1 (MQ=255)
                                                    cccAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTg                                                                                    <  1:891469/141‑1 (MQ=255)
                                                        aGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAg                                                                                <  2:557270/141‑1 (MQ=255)
                                                         ggATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGt                                                                               <  2:29123/141‑1 (MQ=255)
                                                              ccAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATc                                                                          >  1:552258/1‑141 (MQ=255)
                                                              ccAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATc                                                                          <  1:356108/141‑1 (MQ=255)
                                                               cAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCa                                                                         <  2:307225/141‑1 (MQ=255)
                                                               cAGTAAATAAGTTTTTCTAGGCCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTAGCTTTTGGAAGTTGATCa                                                                         >  2:237403/1‑141 (MQ=255)
                                                                 gTAAATAAGTTTTTCTTGGTCATTAATTTTAGCAGTACCAACAACTGCGAGCGCTTGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAAc                                                                       <  2:1059499/141‑1 (MQ=255)
                                                                    aaTAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTg                                                                    <  1:242356/141‑1 (MQ=255)
                                                                      tAAGTTTTTCTTGGTCATTAATTTTAGCATTACCTACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGtt                                                                  <  2:495905/141‑1 (MQ=255)
                                                                        aGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCa                                                                >  2:1059262/1‑141 (MQ=255)
                                                                        aGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGGTCa                                                                >  2:137268/1‑141 (MQ=255)
                                                                        aGTTTTTCTTGGTCATTAATTGTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGTGATACACTTTGTGCGAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCa                                                                <  2:1008171/141‑1 (MQ=255)
                                                                         gTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAACGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCat                                                               >  1:934865/1‑141 (MQ=255)
                                                                                ttGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATgg                                                        >  2:67917/1‑141 (MQ=255)
                                                                                 tGGTCATTAATTTTAGCATTACCAACAACTGCTAGGGCATGTCCTAAATGTGGATCATTAGGGTTTTGAGATACACTTTGTGCAAGAATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGt                                                       >  1:669741/1‑141 (MQ=255)
                                                                                 tGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGt                                                       >  2:603826/1‑141 (MQ=255)
                                                                                  ggTCATTAATTTTAGCATTACCAACAACTGCTAGGGCATGTCCTAAATGTGGATCATTAGGGTTTTGAGATACACTTTGTGCAAGAATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTa                                                      <  1:534245/141‑1 (MQ=255)
                                                                                      aTTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGTTACGcc                                                  >  2:486709/1‑141 (MQ=255)
                                                                                         aaTTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCcttc                                               >  2:825008/1‑141 (MQ=255)
                                                                                           ttttAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTATTCATATGATGGTACGCattctt                                             >  2:267781/1‑141 (MQ=255)
                                                                                                gCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATaa                                        >  1:948371/1‑141 (MQ=255)
                                                                                                    tACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGaa                                    <  1:49851/141‑1 (MQ=255)
                                                                                                       caacaaCTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAatat                                 <  2:975540/141‑1 (MQ=255)
                                                                                                       caacaaCTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAatat                                 <  2:930019/141‑1 (MQ=255)
                                                                                                        aacaacTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATAtc                                >  2:347905/1‑141 (MQ=255)
                                                                                                          caacTGCTAGGGCATGTCCTAAATGTGGATCATTAGGGTTTTGAGATACACTTTGTGCAAGAATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATAtctc                              <  1:56712/141‑1 (MQ=255)
                                                                                                          caacTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATAtctc                              <  2:704942/141‑1 (MQ=255)
                                                                                                          caacTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATAtctc                              >  1:436523/1‑141 (MQ=255)
                                                                                                            acTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTg                            <  1:895962/141‑1 (MQ=255)
                                                                                                              tGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGcc                          >  2:877265/1‑141 (MQ=255)
                                                                                                               gttAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCt                         <  1:427709/139‑1 (MQ=255)
                                                                                                                cTAGGGCATGTCCTAAATGTGGATCATTAGGGTTTTGAGATACACTTTGTGCAAGAATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATTTGATGGTACGCCTTCTTGATAATGAATATCTCTGCCtt                        >  2:615041/1‑141 (MQ=255)
                                                                                                                cTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCtt                        >  2:953084/1‑141 (MQ=255)
                                                                                                                    cgcATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGa                    <  1:218619/141‑1 (MQ=255)
                                                                                                                          tCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGAACATAATTCCTACATTCTCTTTTGTAAGTTGATCAACTTGTTCATATTATGGTACGCCTTCTTGATAATGAGTATCTCTGCCTTGTGATTTAcc              >  1:291867/1‑141 (MQ=255)
                                                                                                                            cTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGt            <  1:913635/141‑1 (MQ=255)
                                                                                                                              aaaTGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTAt          >  1:873581/1‑141 (MQ=255)
                                                                                                                                aTGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTc        <  2:166962/141‑1 (MQ=255)
                                                                                                                                   tgGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAAt     >  1:406383/1‑141 (MQ=255)
                                                                                                                                    gggTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGAGCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATc    <  2:1048166/141‑1 (MQ=255)
                                                                                                                                     ggTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCa   >  2:74086/1‑141 (MQ=255)
                                                                                                                                     ggTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCa   >  2:588528/1‑141 (MQ=255)
                                                                                                                                      gTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCAt  <  2:1053927/141‑1 (MQ=255)
                                                                                                                                      gTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATACCTCTGCCTTGTGATTTACCGTATTCAATCAt  <  1:630067/141‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                            
AATGATAAATGTAATAGGCTTGAATCTGCATCTTGGATTGATAATTCTGTATCCCAAGGATTCCAGTAAATAAGTTTTTCTTGGTCATTAATTTTAGCATTACCAACAACTGCTAGCGCATGTCCTAAATGTGGGTCATTAGGGTTTTGAGATACACTTTGTGCAAGGATCATAATTCCTACATTATCTTTTGTAAGTTGATCAACTTGTTCATATGATGGTACGCCTTCTTGATAATGAATATCTCTGCCTTGTGATTTACCGTATTCAATCAT  >  CP000730/1052269‑1052543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑