Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP000730	1,299,428	A→G	5.6%	K363K (AAA→AAG)	rnjB →	beta‑lactamase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	1,299,428	0	A	G	5.6%	266.6 / 4.9	91	K363K (AAA→AAG)	rnjB	beta‑lactamase
Reads supporting (aligned to +/- strand):  ref base A (37/48);  new base G (2/3);  total (39/52)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01

GCATAAAATTATGAATATCGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTAGCAGCTGAAGCAGGTG  >  CP000730/1299293‑1299567                                                                                                                                        |                                                                                                                                            gCATAAAATTATGAATATCGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGAt                                                                                                                                        >  1:492553/1‑141 (MQ=255) gCATAAAATTATGAATATCGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGAt                                                                                                                                        >  2:349283/1‑141 (MQ=255)     aaaaTTATGAATATCGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAACGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCAt                                                                                                                                    <  2:404177/141‑1 (MQ=255)      aaaTTATGAATATCGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATg                                                                                                                                   >  2:343607/1‑141 (MQ=255)       aaTTATGAATATCGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGc                                                                                                                                  >  1:579521/1‑141 (MQ=255)        aTTATGAATATCGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCt                                                                                                                                 >  1:47609/1‑141 (MQ=255)        aTTATGAATATCGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCt                                                                                                                                 >  1:64324/1‑141 (MQ=255)        aTTATGAATATCGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCt                                                                                                                                 >  1:47665/1‑141 (MQ=255)        aTTATGAATATCGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCt                                                                                                                                 <  2:865942/141‑1 (MQ=255)          tataaaTATCGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTc                                                                                                                               >  2:755295/5‑141 (MQ=255)          tATGAATATCGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTc                                                                                                                               <  1:552484/141‑1 (MQ=255)             gcacatCGAAGAAGACGATTCTGTATATTTTTCCATTACGCGTTCTGCTAATATGGAAGTTATCATTGCTATTACATTAAATGAGCTTGTACGTGCTGGCGTACATATTATTACAAATAACAATAAGATACATGCTTCAAg                                                                                                                            <  2:800506/137‑1 (MQ=255)                tataGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCCTTGCGCATCCATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCa                                                                                                                         <  1:918802/141‑1 (MQ=255)                tatCGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCa                                                                                                                         >  1:1004069/1‑141 (MQ=255)                    gaagaaGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGt                                                                                                                     <  1:100111/141‑1 (MQ=255)                    aaagaagGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAGAAGATTCATGCTTCAAGTCATGGt                                                                                                                     <  2:1079409/140‑1 (MQ=255)                       gaagGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGc                                                                                                                  <  1:127226/141‑1 (MQ=255)                        aagGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCa                                                                                                                 <  1:1041824/141‑1 (MQ=255)                           gCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATgg                                                                                                              >  2:658539/1‑141 (MQ=255)                             gATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGgaa                                                                                                            >  1:30226/1‑141 (MQ=255)                             gATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGgaa                                                                                                            >  1:917625/1‑141 (MQ=255)                              aTTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCTTACAGATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGgaag                                                                                                           <  1:20136/141‑1 (MQ=255)                              aTTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGgaag                                                                                                           >  2:321781/1‑141 (MQ=255)                                 cTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAAt                                                                                                        <  1:369007/141‑1 (MQ=255)                                  tGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAAtt                                                                                                       <  1:879714/141‑1 (MQ=255)                                    tATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATTGTTGCATGGAAGAATTaa                                                                                                     >  2:345776/1‑141 (MQ=255)                                    tATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTaa                                                                                                     <  1:743746/141‑1 (MQ=255)                                        tttAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAat                                                                                                 <  2:601625/141‑1 (MQ=255)                                        tttAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAat                                                                                                 <  2:601531/141‑1 (MQ=255)                                          tAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAatga                                                                                               <  1:549744/141‑1 (MQ=255)                                           aGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCAAGGTTGCATGGAAGAATTAAAAatgat                                                                                              >  2:859487/1‑141 (MQ=255)                                             cAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAAtgatga                                                                                            >  2:223011/1‑141 (MQ=255)                                             cAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAAtgatga                                                                                            >  2:256346/1‑141 (MQ=255)                                                 tACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAGAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTaa                                                                                        <  2:258879/141‑1 (MQ=255)                                                     gCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGAATCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAAtatt                                                                                    <  1:668334/141‑1 (MQ=255)                                                       ttCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAAtattat                                                                                  <  2:132644/141‑1 (MQ=255)                                                        tCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATg                                                                                 >  1:275349/1‑141 (MQ=255)                                                        tCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATg                                                                                 <  1:322488/141‑1 (MQ=255)                                                          tGCTAATATGGACGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGaa                                                                               <  2:356757/141‑1 (MQ=255)                                                             tAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAAcc                                                                            >  1:835231/1‑141 (MQ=255)                                                               atatGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTg                                                                          <  1:148951/141‑1 (MQ=255)                                                                tatGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGa                                                                         <  2:1064030/141‑1 (MQ=255)                                                                    gAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATAc                                                                     <  2:81946/141‑1 (MQ=255)                                                                    gAAGTAATCATTGCGAATACATTAAATGAGATTGTACGTGCTGGCGCACATATTATAAAAAAAAAAAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATAc                                                                     <  2:1080511/141‑1 (MQ=255)                                                                      aGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACtt                                                                   >  2:500896/1‑141 (MQ=255)                                                                           tCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTc                                                              >  2:168887/1‑141 (MQ=255)                                                                               tGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGt                                                          <  1:153204/141‑1 (MQ=255)                                                                                 cGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTAc                                                        <  1:312471/141‑1 (MQ=255)                                                                                 cGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTAc                                                        <  2:910796/141‑1 (MQ=255)                                                                                     tACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAgg                                                    <  1:299835/141‑1 (MQ=255)                                                                                      aCATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGt                                                   >  1:987275/1‑141 (MQ=255)                                                                                       cATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTg                                                  <  1:946731/141‑1 (MQ=255)                                                                                       cATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATACTATGAAACCTGAATACTTTATTCCTGTACAAGGTg                                                  >  2:950001/1‑141 (MQ=255)                                                                                        aTTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGa                                                 <  1:830016/141‑1 (MQ=255)                                                                                          tAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAGAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTACCAATGATGATTACAATTACGAGCAGTGTATCCTTTATTCGCGTACAAGGTGAAt                                               >  1:762686/1‑141 (MQ=255)                                                                                          tAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAAt                                               >  1:504963/1‑141 (MQ=255)                                                                                           aaaTGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAGAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAAtt                                              <  2:804923/141‑1 (MQ=255)                                                                                           aaaTGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAAtt                                              <  2:299066/141‑1 (MQ=255)                                                                                               gAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTaaa                                          <  2:522203/141‑1 (MQ=255)                                                                                                aGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTaaaa                                         <  2:474719/141‑1 (MQ=255)                                                                                                aGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGAAAAAAAAAAAAAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTaaaa                                         <  2:430826/141‑1 (MQ=255)                                                                                                 gCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAAt                                        >  1:967494/1‑141 (MQ=255)                                                                                                 gCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAAt                                        >  2:240824/1‑141 (MQ=255)                                                                                                 gCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAAt                                        >  1:375027/1‑141 (MQ=255)                                                                                                   ttGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGCAACCTGCATACTTTATTCCTGTACAAGGTGAATTTAAAATGc                                      <  1:935433/141‑1 (MQ=255)                                                                                                     gTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAg                                    <  1:48697/141‑1 (MQ=255)                                                                                                      tACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGa                                   >  2:704185/1‑141 (MQ=255)                                                                                                       aCGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGAt                                  >  1:781333/1‑141 (MQ=255)                                                                                                        cGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATa                                 <  1:483430/141‑1 (MQ=255)                                                                                                         gTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAA‑TAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGc                               <  2:33970/141‑1 (MQ=255)                                                                                                          tGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGc                               <  1:172732/141‑1 (MQ=255)                                                                                                          tGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGc                               <  2:111200/141‑1 (MQ=255)                                                                                                            cTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGcac                             >  2:73612/1‑141 (MQ=255)                                                                                                            cTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGcac                             <  2:198283/141‑1 (MQ=255)                                                                                                                 gcACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCg                        <  2:916964/141‑1 (MQ=255)                                                                                                                   acaTATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGaa                      <  1:733112/141‑1 (MQ=255)                                                                                                                     atatTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTCGCATGGGAGAATTAAAAATGATGATTGATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGc                    <  2:1070151/141‑1 (MQ=255)                                                                                                                        ttattCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTag                 >  1:985523/1‑141 (MQ=255)                                                                                                                          attCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTagca               <  2:985523/141‑1 (MQ=255)                                                                                                                          attCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTagca               >  1:1085153/1‑141 (MQ=255)                                                                                                                          attCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTagca               <  1:96004/141‑1 (MQ=255)                                                                                                                           ttCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTagcag              <  1:978607/141‑1 (MQ=255)                                                                                                                           ttCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTagcag              <  2:17144/141‑1 (MQ=255)                                                                                                                              cAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTAGCAGCTg           >  2:697861/1‑141 (MQ=255)                                                                                                                               aaaTAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTAGCAGCTGa          >  1:301335/1‑141 (MQ=255)                                                                                                                                aaTAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTAGCAGCTGaa         >  2:54198/1‑141 (MQ=255)                                                                                                                                aaTAACAAAAAGATTCATGCTTCAAGTCATGGTNGCATGGCAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTAGCAGCTGaa         >  1:990595/1‑141 (MQ=255)                                                                                                                                 aTAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTAGCAGCTGAAg        <  2:288823/141‑1 (MQ=255)                                                                                                                                    aCAAGAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTAGCAGCTGAAGCAg     >  2:695134/1‑141 (MQ=255)                                                                                                                                    aCAAACAGATTCATGCTGCAAGTCATGGTTGCATGCAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAAGTTAAACTGCAGATAGCACATGCGAAGCTAGCAGCTGAAGCAg     <  2:182690/141‑1 (MQ=255)                                                                                                                                     cAAAAAGATTCATGCTNCAAGTCATNGTTNCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTAGCAGCTGAAGCAgg    >  1:944211/1‑141 (MQ=255)                                                                                                                                       aaaaGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTAGCAGCTGAAGCAGgtg  >  1:79811/1‑141 (MQ=255)                                                                                                                                        |                                                                                                                                            GCATAAAATTATGAATATCGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCGAATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAAAAGATTCATGCTTCAAGTCATGGTTGCATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGATAGCACATGCGAAGCTAGCAGCTGAAGCAGGTG  >  CP000730/1299293‑1299567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑