Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 1,306,583 C→T 5.4% P216S (CCA→TCA)  fabG → short chain dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007301,306,5830CT 5.4% 257.0 / 2.2 83P216S (CCA→TCA) fabGshort chain dehydrogenase
Reads supporting (aligned to +/- strand):  ref base C (47/31);  new base T (2/3);  total (49/34)
Fisher's exact test for biased strand distribution p-value = 3.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TCGCACCTGGATTTGTAGCCGGTAATATGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATGAATCATAATTTG  >  CP000730/1306446‑1306719
                                                                                                                                         |                                                                                                                                        
tCGCACCTGGATTTGTAGCCGGTAATATGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCaa                                                                                                                                       >  2:1044106/1‑141 (MQ=255)
  gCACCTGGATTTGTAGCCGGTAATATGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAAt                                                                                                                                     >  2:765980/1‑141 (MQ=255)
   cACCTGGATTTGTAGCCGGTAATATGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATg                                                                                                                                    >  2:446716/1‑141 (MQ=255)
         gATTTGTAGCCGGTAATATGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGaa                                                                                                                              >  1:884214/1‑141 (MQ=255)
          aTTTGTAGCCGGTAATATGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAg                                                                                                                             <  2:569440/141‑1 (MQ=255)
          aTTTGTAGCCGGTAATATGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAg                                                                                                                             <  1:49685/141‑1 (MQ=255)
          aTTTGGAGCCGGTAATATGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCCATTTGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAg                                                                                                                             <  2:47885/141‑1 (MQ=255)
           tttGTAGCCGGTAATATGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGCGCGCGCCTCCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAgt                                                                                                                            >  1:284392/1‑141 (MQ=255)
             tGTAGCCGGTAATATGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAgtgt                                                                                                                          <  1:765980/141‑1 (MQ=255)
               tAGCCGGTAATATGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTa                                                                                                                        >  1:540848/1‑141 (MQ=255)
               tAGCCGGTAATATGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTa                                                                                                                        <  1:936843/141‑1 (MQ=255)
               tAGCCGGTAATATGGCAAGGGAGTGGCAAGAAGATGAACTTCAAGCAATGACAACTGAGTTACCACAACAGCGAATGGCTTTACCGAGTGAGGTTGCTCATAAATGGGCCTATGTATATCACTCAATAGCTAGAAGCGTTa                                                                                                                        >  2:684482/1‑141 (MQ=255)
                        atatGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGACTTACCACAACAGCGAGTGGGTGTACCGAGTGTGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACta                                                                                                               >  1:319457/1‑141 (MQ=255)
                        atatGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACta                                                                                                               >  2:973600/1‑141 (MQ=255)
                        atatGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACta                                                                                                               >  2:375113/1‑141 (MQ=255)
                            ggCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACa                                                                                                           <  1:380711/141‑1 (MQ=255)
                            ggCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACa                                                                                                           >  2:567712/1‑141 (MQ=255)
                             gCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAg                                                                                                          <  2:944064/141‑1 (MQ=255)
                                agtgagtgGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGaaa                                                                                                       <  1:790453/141‑1 (MQ=255)
                                 gtgagtgGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAg                                                                                                      >  2:969494/1‑141 (MQ=255)
                                   gagtgGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGtt                                                                                                    >  2:108504/1‑141 (MQ=255)
                                    ggcaggaataagaTGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTa                                                                                                   <  2:585042/132‑1 (MQ=255)
                                    agtgGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTa                                                                                                   <  2:170679/141‑1 (MQ=255)
                                                 tGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGta                                                                                      >  1:57012/1‑141 (MQ=255)
                                                 tGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGta                                                                                      <  2:874577/141‑1 (MQ=255)
                                                  gAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGtat                                                                                     >  2:190013/1‑141 (MQ=255)
                                                   aaCTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACTCAAATGCTAGAAGCGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGtata                                                                                    <  1:677556/141‑1 (MQ=255)
                                                   aaCTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGtata                                                                                    <  1:15042/141‑1 (MQ=255)
                                                   aaCTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGtata                                                                                    >  2:1019494/1‑141 (MQ=255)
                                                   aaCTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGtata                                                                                    >  1:489955/1‑141 (MQ=255)
                                                   aaCTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTCTACCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTatat                                                                                   >  1:18934/1‑141 (MQ=255)
                                                        cAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTaa                                                                               <  1:37042/141‑1 (MQ=255)
                                                        cAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTaa                                                                               >  2:720479/1‑141 (MQ=255)
                                                         aaGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTaaa                                                                              >  2:29396/1‑141 (MQ=255)
                                                               tGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAg                                                                        >  2:968674/1‑141 (MQ=255)
                                                               tGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAg                                                                        <  1:145736/141‑1 (MQ=255)
                                                                gATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGa                                                                       <  1:137233/141‑1 (MQ=255)
                                                                 aTAACTGAATTACCACAACAGCGATTGGATTTACCGAGTGATGTTGCTCATCCAGGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGaa                                                                      >  2:311822/1‑141 (MQ=255)
                                                                  tAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAAc                                                                     >  1:137871/1‑141 (MQ=255)
                                                                  tAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAAc                                                                     >  1:45460/1‑141 (MQ=255)
                                                                    aCTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACCTGCGCCAATTTATATCAACCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTa                                                                   <  1:917988/141‑1 (MQ=255)
                                                                        aaTTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTAtttt                                                               <  2:187773/141‑1 (MQ=255)
                                                                              cacaACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAg                                                         >  2:666515/1‑141 (MQ=255)
                                                                                caacaGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCa                                                       <  1:2602/141‑1 (MQ=255)
                                                                                       gATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAACTGttt                                                >  2:215619/1‑141 (MQ=255)
                                                                                         ttGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGTAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAGCTATTTTTATTAGCAAATGttttt                                              <  2:914314/141‑1 (MQ=255)
                                                                                         ttGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGttttt                                              <  2:356524/141‑1 (MQ=255)
                                                                                         ttGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGttttt                                              <  1:479477/141‑1 (MQ=255)
                                                                                          tGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTa                                             <  1:567712/141‑1 (MQ=255)
                                                                                           ggTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCTCCCACATGCTAGCCGTGTTCCAGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTac                                            <  1:1029169/141‑2 (MQ=255)
                                                                                             ttttACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACTCAAATGCTAGAAGCGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTAtga                                          <  2:575272/141‑1 (MQ=255)
                                                                                                tACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAGATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTAtgattg                                       <  2:107224/141‑1 (MQ=255)
                                                                                                tACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTAtgattg                                       <  1:637513/141‑1 (MQ=255)
                                                                                                  ccGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTAtgattgat                                     >  2:89544/1‑141 (MQ=255)
                                                                                                   cGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACTCAAATGCTAGAAGCGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATg                                    <  2:805180/141‑1 (MQ=255)
                                                                                                   cGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATg                                    <  2:817969/141‑1 (MQ=255)
                                                                                                      gTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTta                                 >  2:678695/1‑141 (MQ=255)
                                                                                                         aGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTataa                              >  1:980572/1‑141 (MQ=255)
                                                                                                          ggTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTataat                             >  2:625311/1‑141 (MQ=255)
                                                                                                           gTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTataata                            <  2:744705/141‑1 (MQ=255)
                                                                                                             tGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATg                          >  2:971732/1‑141 (MQ=255)
                                                                                                             tGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGATAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAAAGTTTTTTTGATTGATGTTATAatatt                          >  2:507928/1‑140 (MQ=255)
                                                                                                              gCTCATACATGCGCCTATTTATATCACTCAAATGCTAGAAGCGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGa                         >  1:980406/1‑141 (MQ=255)
                                                                                                              gCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTAtgattgat                                     <  1:225080/129‑1 (MQ=255)
                                                                                                              gCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTAtgattgat                                     >  2:225080/1‑129 (MQ=255)
                                                                                                                tCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAat                       >  1:78048/1‑141 (MQ=255)
                                                                                                                     cATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTAc                  >  2:239854/1‑141 (MQ=255)
                                                                                                                     cATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTAc                  >  1:556468/1‑141 (MQ=255)
                                                                                                                         cgcCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATg              >  2:1031563/1‑141 (MQ=255)
                                                                                                                         cgcCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATg              >  2:32014/1‑141 (MQ=255)
                                                                                                                         cgcCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATg              >  1:253619/1‑141 (MQ=255)
                                                                                                                         cgcCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATg              >  1:995070/1‑141 (MQ=255)
                                                                                                                         cgcCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATg              >  1:675943/1‑141 (MQ=255)
                                                                                                                           ccTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATGaa            >  2:688183/1‑141 (MQ=255)
                                                                                                                           ccTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATGaa            >  2:300217/1‑141 (MQ=255)
                                                                                                                           ccTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATGaa            >  1:801642/1‑141 (MQ=255)
                                                                                                                            cTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATGAAt           <  1:952735/141‑1 (MQ=255)
                                                                                                                            cTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATGAAt           <  2:550882/141‑1 (MQ=255)
                                                                                                                              aTTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAGCTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATGAATCa         <  2:325213/141‑1 (MQ=255)
                                                                                                                                   tatCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATGAATCATAAtt    >  2:199517/1‑141 (MQ=255)
                                                                                                                                     tCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATGAATCATAATTTg  >  2:685766/1‑141 (MQ=255)
                                                                                                                                     tCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATGAATCATAATTTg  >  2:866068/1‑141 (MQ=255)
                                                                                                                                     tCACCCAAACGCTAGAAGTGTTACTGGAACTATACATAAAGTAACTGGTGCGTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGCTTTTATGATTGATGTTCTAATATGAATATTACGATGAATCATaactcg  >  2:805067/1‑137 (MQ=255)
                                                                                                                                         |                                                                                                                                        
TCGCACCTGGATTTGTAGCCGGTAATATGGCAAGTGAGTGGCAAGAAGATGAACTTCAAGCAATGATAACTGAATTACCACAACAGCGATTGGTTTTACCGAGTGAGGTTGCTCATACATGCGCCTATTTATATCACCCAAATGCTAGAAGTGTTACTGGAACTATACAGAAAGTTAATGGTGCTTGGTATATTTAAAATATAGAACTATTTTTATGAGCAAATGTTTTTATGATTGATGTTATAATATGAATATTACAATGAATCATAATTTG  >  CP000730/1306446‑1306719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: