Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 2,257,055 C→T 7.0% intergenic (‑144/+56) dps ← / ← yuxK Dps family stress protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007302,257,0550CT 7.0% 295.2 / 7.9 101intergenic (‑144/+56)dps/yuxKDps family stress protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (53/39);  new base T (3/4);  total (58/43)
Fisher's exact test for biased strand distribution p-value = 4.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.12e-01

Only 100 of 102 total aligned reads displayed.

ATACACTCCTTAAAATTGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCATAATCATTTGGTTGGTGCCATGTTGTTTTCCAC  >  CP000730/2256917‑2257195
                                                                                                                                          |                                                                                                                                            
aTACACTCCTTAAAATTGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCt                                                                                                                                            >  1:136298/1‑141 (MQ=255)
aTACACTCCTTAAAATTGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCt                                                                                                                                            <  2:944760/141‑1 (MQ=255)
aTACACTCCTTAAAATTGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCt                                                                                                                                            >  1:305833/1‑141 (MQ=255)
aTACACTCCTTAAAATTGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTAATCTAATCTAACCGCAAAGTGTTCCGTTATTTAAATGCCt                                                                                                                                            >  2:161257/1‑141 (MQ=255)
  acacTCCTTAAAATTGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATGATTCTAATCTGTAAAGTGTTTTTACTCTCTTTTTTATAATTATTCTAATCTAAATGTAAGGTGTTCCGCTTTTTAAATGTCTaa                                                                                                                                          >  1:459801/1‑141 (MQ=255)
   cacTCCTTAAAATTGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTaaa                                                                                                                                         <  1:163645/141‑1 (MQ=255)
   cacTCCTTAAAATTGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTaaa                                                                                                                                         >  1:291662/1‑141 (MQ=255)
   cacTACTTAAAATTGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTaaa                                                                                                                                         <  1:1042471/141‑1 (MQ=255)
      tCCTTAAAATTGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAAttt                                                                                                                                      <  1:294855/141‑1 (MQ=255)
       ccTTAAAATTGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTTTAGTGTTCCGCTATTTAAATGCCTAAAtttt                                                                                                                                     <  2:58652/141‑1 (MQ=255)
         ttAAAATTGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTaa                                                                                                                                   >  2:7207/1‑141 (MQ=255)
         ttAAAATTGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTaa                                                                                                                                   <  2:830792/141‑1 (MQ=255)
               ttGTCTACGTCTTGCTTGTTTATCTTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATtcatc                                                                                                                             >  1:166878/1‑141 (MQ=255)
               ttGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATtcatc                                                                                                                             >  1:867880/1‑141 (MQ=255)
                 gTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTcatcat                                                                                                                           <  1:635509/141‑1 (MQ=255)
                 gTCTACGTCTTGCTCGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGTTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTcatcat                                                                                                                           >  2:85910/1‑141 (MQ=255)
                   cTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCctct                                                                                                                         >  1:64045/1‑141 (MQ=255)
                   cTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCt                                                                                                                         <  1:68679/141‑1 (MQ=255)
                     aCGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTaa                                                                                                                       <  1:331923/141‑1 (MQ=255)
                      cGTCTTGCTTGTTTCTATTCATTATTATATTATAATAATTTTTATCTGTTCAGTGTTTTTGCTCTCTTTTTTTTAATTATGCTCAACTACCCGTGTAGCGTCCCGCCATTTATGTGCCTTAATATTAATTCctcatcctat                                                                                                                      <  2:584195/141‑5 (MQ=255)
                        tcatgcatgTTTATATAAATTATCATATAATAATACTTTTAATATGTAAAGTGTTTTTGCTATCTTTTTTATAATTATTATAATCTAACCGTAAAGTGTTCCGCTATTTACATGACTAATTTTTAATTAATCATCTCatat                                                                                                                    >  2:267862/4‑141 (MQ=255)
                         cttgcttgTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAatata                                                                                                                   <  1:127337/141‑1 (MQ=255)
                         cttgcttgTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTGTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAatata                                                                                                                   <  1:154708/141‑1 (MQ=255)
                          ttgcttgTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAatatat                                                                                                                  <  1:505867/141‑1 (MQ=255)
                           tgcttgTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTTTTTTTTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATc                                                                                                                 >  2:265164/1‑141 (MQ=255)
                             cttgTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCa                                                                                                               <  1:96889/141‑1 (MQ=255)
                              ttgTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCAt                                                                                                              <  2:841619/141‑1 (MQ=255)
                              ttgTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCAt                                                                                                              >  2:619224/1‑141 (MQ=255)
                                gTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTa                                                                                                            >  1:1050241/1‑141 (MQ=255)
                                  ttATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATc                                                                                                          >  2:589955/1‑141 (MQ=255)
                                  ttATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATc                                                                                                          >  1:734242/1‑141 (MQ=255)
                                       ttaattaTTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTa                                                                                                     >  1:394137/1‑141 (MQ=255)
                                        taattaTTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAg                                                                                                    >  1:446140/1‑141 (MQ=255)
                                         aattaTTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTTTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGc                                                                                                   >  2:165202/1‑141 (MQ=255)
                                         aattaTTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGc                                                                                                   <  1:557265/141‑1 (MQ=255)
                                         aattaTTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGc                                                                                                   <  1:494549/141‑1 (MQ=255)
                                         aattaTTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGc                                                                                                   <  1:986818/141‑1 (MQ=255)
                                         aattaTTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGc                                                                                                   >  1:225867/1‑141 (MQ=255)
                                          attattATATTATAATAATTTTAATCTGTAAAGTGTTTTTTTTCTTTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCTATTATTAATTAGCa                                                                                                  >  2:780684/1‑141 (MQ=255)
                                            tattatattaTAATGATTCTAATCTGTAAAGTGTTTTTACTCTCTTTTTTATAATTATTCTAATCTAAATGTAAGGTGTTCCGCTTTTTAAATGTCTAAATTTTAATTCATCATCTAGTATATCCATTATCAATTAGCAAg                                                                                                <  2:389920/141‑1 (MQ=255)
                                            tattatattaTAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAg                                                                                                >  2:696338/1‑141 (MQ=255)
                                            tattatattaTAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAg                                                                                                <  2:119585/141‑1 (MQ=255)
                                             attatattatAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGt                                                                                               >  1:216415/1‑141 (MQ=255)
                                              ttatattataATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTa                                                                                              <  1:916862/141‑1 (MQ=255)
                                               tatattataATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTAt                                                                                             >  1:174164/1‑141 (MQ=255)
                                                atattataATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATg                                                                                            >  2:820838/1‑141 (MQ=255)
                                                atattataATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATg                                                                                            >  1:224975/1‑141 (MQ=255)
                                                 tattataATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGt                                                                                           <  2:607169/141‑1 (MQ=255)
                                                  attataATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGtt                                                                                          >  1:1065190/1‑141 (MQ=255)
                                                      taataaTTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTatc                                                                                     <  1:1060892/141‑1 (MQ=255)
                                                          aatTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTatcaat                                                                                  >  1:663206/1‑141 (MQ=255)
                                                           atTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTACATAACCTAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTatcaatc                                                                                 >  1:565492/1‑141 (MQ=255)
                                                             tttAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAg                                                                               <  1:6303/141‑1 (MQ=255)
                                                             tttAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAg                                                                               <  2:646316/141‑1 (MQ=255)
                                                               tAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTa                                                                             >  1:276561/1‑141 (MQ=255)
                                                                aaTCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTaa                                                                            >  1:159007/1‑141 (MQ=255)
                                                                aaTCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTaa                                                                            >  1:408088/1‑141 (MQ=255)
                                                                aaTCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTaa                                                                            >  2:442020/1‑141 (MQ=255)
                                                                aaTCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTaa                                                                            >  1:578636/1‑141 (MQ=255)
                                                                 ttCTTTACAGTGTTTTTGCTCTCTTTTTTATAATTATTCTGATCTAACGGTAAAGTGTTTTGCTTTTTAATTGCCTAATTTTTATTTCTTCATCTAATATATCCATTATCAATTATCAATTTTGTTTTATCTATCAGTatt                                                                           >  2:481743/2‑139 (MQ=255)
                                                                  tCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGt                                                                          >  1:179697/1‑141 (MQ=255)
                                                                   cTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGtt                                                                         >  1:746549/1‑141 (MQ=255)
                                                                    tGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGttt                                                                        >  2:623132/1‑141 (MQ=255)
                                                                     gTAAAGTGTTTTTGCTCTCTTTTTTTTAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCATTTAGTAAGtttt                                                                       >  2:465711/1‑141 (MQ=255)
                                                                     gTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGtttt                                                                       >  2:496258/1‑141 (MQ=255)
                                                                       aaaGTGTTTTTACTCTCTTTTTTATAATTATTCTAATCTAAATGTAAGGTGTTCCGCTTTTTAAATGTCTAAATTTTAATTCATCATCTAGTATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTAc                                                                     <  2:459801/141‑1 (MQ=255)
                                                                          gtgtTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACttt                                                                  <  2:276561/141‑1 (MQ=255)
                                                                          gtgtTTTTGCTCTCTTTTTTATAATTATTATAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACttt                                                                  >  1:303182/1‑141 (MQ=255)
                                                                             tttttGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGc                                                               <  1:6214/141‑1 (MQ=255)
                                                                             tttttGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGc                                                               <  2:898146/141‑1 (MQ=255)
                                                                              ttttGCTCTCTTTTTTTTTTTTTTTTTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTTTTTATTTGTAATTTTTACTTTCGCa                                                              >  2:824989/1‑141 (MQ=255)
                                                                               tttGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCAt                                                             >  1:63358/1‑141 (MQ=255)
                                                                               tttGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCAt                                                             >  1:279132/1‑141 (MQ=255)
                                                                               tttGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCAt                                                             >  1:352787/1‑141 (MQ=255)
                                                                                ttGCTCTCTTTTTTATAATTATTCTACTCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCAtt                                                            <  2:1053417/141‑1 (MQ=255)
                                                                                  gCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTat                                                          <  2:62217/141‑1 (MQ=255)
                                                                                   ctctctTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTatc                                                         <  2:214786/141‑1 (MQ=255)
                                                                                    tctctTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTatca                                                        >  1:400665/1‑141 (MQ=255)
                                                                                       ctTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCt                                                     >  1:34000/1‑141 (MQ=255)
                                                                                        ttttttATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTATTTCATCATTTAATATATCTTTTTTCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTa                                                    >  2:329758/1‑141 (MQ=255)
                                                                                           tttATAATTATTCTAATCTAAATGTAAGGTGTTCCGCTTTTTAAATGTCTAAATTTTAATTCATCATCTAGTATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTaaaa                                                 >  2:482747/1‑141 (MQ=255)
                                                                                            ttATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTaaaaa                                                <  2:129163/141‑1 (MQ=255)
                                                                                             tataATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAg                                               >  1:577664/1‑141 (MQ=255)
                                                                                                aaTTATTCTAATCTAAATGTAAGGTGTTCCGCTTTTTAAATGTCTAAATTTTAATTCATCATCTAGTATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAAc                                            <  2:287512/141‑1 (MQ=255)
                                                                                                     ttCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGAttt                                       <  1:265164/141‑1 (MQ=255)
                                                                                                         aatctaaCCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCa                                   >  2:77411/1‑141 (MQ=255)
                                                                                                          atctaaCCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCAt                                  <  1:268757/141‑1 (MQ=255)
                                                                                                                ccGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCATAATCAt                            <  1:665722/141‑1 (MQ=255)
                                                                                                                   tAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCATAATCATttg                         <  2:221384/141‑1 (MQ=255)
                                                                                                                    aaaGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCATAATCATttgg                        >  2:71518/1‑141 (MQ=255)
                                                                                                                     aaGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCATAATCATttggt                       <  1:57433/141‑1 (MQ=255)
                                                                                                                      ggtgatacactttttAAATGTCTAAATATTAAATCATCATCTAGTATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGAGTTCTCATAATCAAttgttt                      >  2:1068486/13‑141 (MQ=255)
                                                                                                                      aGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCATAATCATttggtt                      >  2:713517/1‑141 (MQ=255)
                                                                                                                      aGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCATAATCATttggtt                      >  1:601218/1‑141 (MQ=255)
                                                                                                                               ctttttAAATGTCTAAATTTTAATTCATCATCTAGTATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCATAATCATTTGGTTGGTGCCAtg             <  2:958620/138‑1 (MQ=255)
                                                                                                                                   ttAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCATAATCATTTGGTTGGTGCCAtgttgt         <  1:135148/141‑1 (MQ=255)
                                                                                                                                   ttAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCATAATCATTTGGTTGGTGCCAtgttgt         >  1:602370/1‑141 (MQ=255)
                                                                                                                                    tAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCATAATCATTTGGTTGGTGCCATgttgtt        <  1:579747/141‑1 (MQ=255)
                                                                                                                                        tGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCATAATCATTTGGTTGGTGCCATGTTGTTTTcc    >  1:591858/1‑141 (MQ=255)
                                                                                                                                          ccTAAATTTTAATTCATCATCTTATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCATAATCATTTGGTTGGTGCCATGTTGTTTTCcac  <  2:305833/141‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                            
ATACACTCCTTAAAATTGTCTACGTCTTGCTTGTTTATATTAATTATTATATTATAATAATTTTAATCTGTAAAGTGTTTTTGCTCTCTTTTTTATAATTATTCTAATCTAACCGTAAAGTGTTCCGCTATTTAAATGCCTAAATTTTAATTCATCATCTAATATATCCATTATCAATTAGCAAGTATGTTTTATCAATCAGTAAGTTTTACTTTCGCATTATCATCTAAAAAGAACGATTTTTCATAATCATTTGGTTGGTGCCATGTTGTTTTCCAC  >  CP000730/2256917‑2257195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: