Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 2,379,107 A→C 5.2% V127G (GTT→GGT)  USA300HOU_2240 ← AEC family malonate efflux carrier

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007302,379,1070AC 5.2% 358.9 / 10.1 116V127G (GTT→GGT) USA300HOU_2240AEC family malonate efflux carrier
Reads supporting (aligned to +/- strand):  ref base A (56/54);  new base C (2/4);  total (58/58)
Fisher's exact test for biased strand distribution p-value = 6.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.32e-01

Only 100 of 117 total aligned reads displayed.

TATGTAACGAGTGGCACTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCATATTTTCTAAAAAACCAGACAGCAATC  >  CP000730/2378969‑2379247
                                                                                                                                          |                                                                                                                                            
 atgtaACGAGTGGCACTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACaa                                                                                                                                           <  1:395168/141‑1 (MQ=255)
 atgtaACGAGTGGCACTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACaa                                                                                                                                           <  1:130992/141‑1 (MQ=255)
 atgtaACGAGTGGCACTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACAAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACaa                                                                                                                                           <  2:840898/141‑1 (MQ=255)
   gtaACGAGTGGCACTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACaaaa                                                                                                                                         <  1:241291/141‑1 (MQ=255)
    taACGAGTGGCACTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAaaat                                                                                                                                        >  2:492555/1‑141 (MQ=255)
     aaCGAGTGGCACTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAaaata                                                                                                                                       >  1:413243/1‑141 (MQ=255)
      aCGAGTGGCACTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAaaataa                                                                                                                                      >  2:172779/1‑141 (MQ=255)
            ggCACTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAATGTACCTTCCTTCAAATAAATTTTCTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGt                                                                                                                                >  1:1028646/1‑141 (MQ=255)
            ggCACTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGt                                                                                                                                >  2:438932/1‑141 (MQ=255)
             gCACTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTc                                                                                                                               <  1:77333/141‑1 (MQ=255)
               aCTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTccc                                                                                                                             >  2:45864/1‑141 (MQ=255)
               aCTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTccc                                                                                                                             <  1:181829/141‑1 (MQ=255)
                cTGATTGTAATAATTTCTTACCTAAATATTTAAAATTGAATTGATAACTACCTTCACTAAATTAGCTACCTACAAAGTAAGTAATTTCAAACATCACAAAGGCACAACCTATATAAGCCATAACAAAATAAATAAGTCACg                                                                                                                            >  2:84394/1‑141 (MQ=255)
                cTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTccca                                                                                                                            <  2:241267/141‑2 (MQ=255)
                cTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTccca                                                                                                                            <  2:241309/141‑2 (MQ=255)
                  gATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGtt                                                                                                                          <  2:726591/141‑1 (MQ=255)
                      gTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAg                                                                                                                      >  1:997833/1‑141 (MQ=255)
                      gTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAg                                                                                                                      <  1:249898/141‑1 (MQ=255)
                       taataaTTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAgg                                                                                                                     >  1:695262/1‑141 (MQ=255)
                       taataaTTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAgg                                                                                                                     >  2:722361/1‑141 (MQ=255)
                        aataatTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGc                                                                                                                    >  1:429513/1‑141 (MQ=255)
                         ataatTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGcc                                                                                                                   <  1:63965/141‑1 (MQ=255)
                           aatTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGccct                                                                                                                 >  2:45726/1‑139 (MQ=255)
                            atTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCata                                                                                                                >  2:498402/1‑141 (MQ=255)
                             tttCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATACCAAAATAAATAAGCCCCGTTTTAGGCCatat                                                                                                               <  2:251397/141‑1 (MQ=255)
                                 ttACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACt                                                                                                           <  2:558282/141‑1 (MQ=255)
                                   aCCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTc                                                                                                         >  1:285316/1‑141 (MQ=255)
                                      tAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAAt                                                                                                      <  2:405831/141‑1 (MQ=255)
                                       aaaTATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAAtt                                                                                                     <  2:825961/141‑1 (MQ=255)
                                          tatTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATccactaattgaag                                                                                                  <  2:473998/141‑13 (MQ=255)
                                            tttAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTgg                                                                                                <  2:405081/141‑1 (MQ=255)
                                            tttAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTgg                                                                                                <  2:595232/141‑1 (MQ=255)
                                             ttAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGa                                                                                               <  1:331726/141‑1 (MQ=255)
                                                aaaTCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGatac                                                                                            >  1:670130/1‑140 (MQ=255)
                                                 aaTCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACCTCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATg                                                                                           <  2:350895/141‑1 (MQ=255)
                                                    cGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCaa                                                                                        <  1:155986/141‑1 (MQ=255)
                                                    cGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCaa                                                                                        <  1:990136/141‑1 (MQ=255)
                                                    cGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCaa                                                                                        <  1:235665/141‑1 (MQ=255)
                                                     gAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCaca                                                                                       >  1:689368/1‑139 (MQ=255)
                                                      aaTTGATCACTACACTCACTAAAGTATCTACCTACAAAGTAAGTAATTCCAAACACCACAAAGGCACCACCTATATCAGCCATACCAAAATAAATAAGCCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAAc                                                                                      <  2:859783/141‑1 (MQ=255)
                                                       aTTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACACCACAAAGGCACCACCTATATCAGCCATACCAAAATAAATAAGCCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACa                                                                                     <  2:32884/141‑1 (MQ=255)
                                                          gATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATc                                                                                  <  2:104720/141‑1 (MQ=255)
                                                          gATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATc                                                                                  >  2:118202/1‑141 (MQ=255)
                                                           aTCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATcc                                                                                 >  1:1043187/1‑141 (MQ=255)
                                                            tCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCa                                                                                <  2:991791/141‑1 (MQ=255)
                                                            tCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCa                                                                                >  2:306934/1‑141 (MQ=255)
                                                             cACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCaa                                                                               <  2:754932/141‑1 (MQ=255)
                                                                tACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAatat                                                                            <  1:106348/141‑1 (MQ=255)
                                                                  ccTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTc                                                                          <  1:816076/141‑1 (MQ=255)
                                                                     tCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATa                                                                       >  2:699896/1‑141 (MQ=255)
                                                                     tCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAAAAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATa                                                                       >  2:148554/1‑141 (MQ=255)
                                                                      cACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGata                                                                                             <  1:213394/118‑1 (MQ=255)
                                                                      cACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGata                                                                                             >  2:213394/1‑118 (MQ=255)
                                                                       aCTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATACCAAAATAAATAAGCCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGc                                                                     >  1:233590/1‑141 (MQ=255)
                                                                        cTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCa                                                                    >  1:239907/1‑141 (MQ=255)
                                                                        cTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCa                                                                    >  2:250112/1‑141 (MQ=255)
                                                                            aGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAg                                                                >  2:962712/1‑141 (MQ=255)
                                                                            aGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAg                                                                <  2:515986/141‑1 (MQ=255)
                                                                            aGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAg                                                                >  2:865831/1‑141 (MQ=255)
                                                                            aGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAg                                                                >  2:865936/1‑141 (MQ=255)
                                                                            aGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAg                                                                >  2:508282/1‑141 (MQ=255)
                                                                               aGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGtca                                                             <  1:970348/141‑1 (MQ=255)
                                                                                gCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGtcat                                                            <  1:328952/141‑1 (MQ=255)
                                                                                gCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGtcat                                                            >  2:490591/1‑141 (MQ=255)
                                                                                gCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGtcat                                                            <  1:533107/141‑1 (MQ=255)
                                                                                gCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGtcaa                                                            >  1:378122/1‑140 (MQ=255)
                                                                                  tacctacAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGtcatca                                                          >  2:697419/1‑141 (MQ=255)
                                                                                   acctacAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTcatcat                                                         <  1:492555/141‑1 (MQ=255)
                                                                                          aagtaagtAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACt                                                  >  1:223390/1‑141 (MQ=255)
                                                                                           agtaagtaATTCCAAACATCACAAAGGCACCACCTATATCAGCCATACCAAAATAAATAAGCCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTg                                                 >  2:204056/1‑141 (MQ=255)
                                                                                            gtaagtaaTTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGa                                                <  1:426240/141‑1 (MQ=255)
                                                                                            gtaagtaaTTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGAGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGa                                                <  2:90758/141‑1 (MQ=255)
                                                                                             taagtaaTTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGAt                                               >  2:953591/1‑141 (MQ=255)
                                                                                               agtaaTTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATcc                                             >  1:884066/1‑141 (MQ=255)
                                                                                                gtaaTTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCa                                            >  2:145331/1‑141 (MQ=255)
                                                                                                gtaaTTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCa                                            >  1:608785/1‑141 (MQ=255)
                                                                                                  aagtcgaaaCATCCCGAAGGCACCACCTATATCAGCCATAACTAAATACATGAGTCCCGTTTTAGGCGTTATCACTTCACTAAGTTGGTATGCAAACAATCCAATACTCATAGCCCCCGCCATCATACCTTCTGATCCACg                                          <  2:208760/135‑1 (MQ=255)
                                                                                                    ttCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCa                                        >  2:1050157/1‑141 (MQ=255)
                                                                                                    ttCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCa                                        >  1:153476/1‑141 (MQ=255)
                                                                                                     tCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCAt                                       <  1:789719/141‑1 (MQ=255)
                                                                                                         aaCATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGa                                   >  2:74004/1‑141 (MQ=255)
                                                                                                         aaCATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGa                                   >  2:912665/1‑141 (MQ=255)
                                                                                                          aCATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGAt                                  >  2:349394/1‑141 (MQ=255)
                                                                                                            aTCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTa                                >  1:125177/1‑141 (MQ=255)
                                                                                                             tCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTAt                               >  1:147475/1‑141 (MQ=255)
                                                                                                             tCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCAGATCACGTCAATTAGGGGAGATGCAAACAATCCAATATTCATATCACCAGTCATCATACTTACTGATCCACGCATGTGATTAt                               >  1:758920/1‑141 (MQ=255)
                                                                                                               acaAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCTATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCa                             <  2:1054170/141‑1 (MQ=255)
                                                                                                               acaAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCa                             >  1:240114/1‑141 (MQ=255)
                                                                                                               acaAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCa                             <  1:849076/141‑1 (MQ=255)
                                                                                                                  aaGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCatat                          <  1:840973/141‑1 (MQ=255)
                                                                                                                      caccacCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCATATTTTc                      <  1:530842/141‑1 (MQ=255)
                                                                                                                        ccaccTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCATATTTTCTa                    >  1:134736/1‑141 (MQ=255)
                                                                                                                        ccaccTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCATATTTTCTa                    >  1:695942/1‑141 (MQ=255)
                                                                                                                         caccTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCATATTTTCTaa                   <  2:394631/141‑1 (MQ=255)
                                                                                                                         caccTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCATATTTTCTaa                   <  2:526005/141‑1 (MQ=255)
                                                                                                                                  cAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCATATTTTCTAAAAAACCAGa          >  1:813371/1‑141 (MQ=255)
                                                                                                                                   aGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCATATTTTCTAAAAAACCAGAc         >  1:633803/1‑141 (MQ=255)
                                                                                                                                    gCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTGCAATTAGTGGATATTCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCATATTTTCTAAAAAACCAGACa        <  1:99248/141‑1 (MQ=255)
                                                                                                                                       aTAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCATATTTTCTAAAAAACCAGACAGCa     <  2:1048807/141‑1 (MQ=255)
                                                                                                                                          aCAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCATATTTTCTAAAAAACCAGACAGCAATc  >  2:355656/1‑141 (MQ=255)
                                                                                                                                          |                                                                                                                                            
TATGTAACGAGTGGCACTGATTGTAATAATTTCTTACCTAAATATTTAAAATCGAATTGATCACTACCTTCACTAAAGTAGCTACCTACAAAGTAAGTAATTCCAAACATCACAAAGGCACCACCTATATCAGCCATAACAAAATAAATAAGTCCCGTTTTAGGCCATATCACTTCAATTAGTGGATATGCAAACAATCCAATATTCATAGCACCAGTCATCATACCTACTGATCCACGCATGTGATTATCATATTTTCTAAAAAACCAGACAGCAATC  >  CP000730/2378969‑2379247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: