| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 2,524,238 | G→T | 6.9% | L132I (CTT→ATT) | nirB ← | nitrite reductase (NAD(P)H) large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 2,524,238 | 0 | G | T | 6.9% | 335.4 / 9.0 | 101 | L132I (CTT→ATT) | nirB | nitrite reductase (NAD(P)H) large subunit |
| Reads supporting (aligned to +/- strand): ref base G (40/54); new base T (4/3); total (44/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.37e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
TCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGCAGTAGTAACTGATTGATTTGCTCTAT > CP000730/2524099‑2524375 | tCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGc > 2:773740/1‑141 (MQ=255)tCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGc < 1:334143/141‑1 (MQ=255)tCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGc > 1:745176/1‑141 (MQ=255) aGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGt < 1:736233/141‑1 (MQ=255) aaaTGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTtctc < 2:551890/141‑1 (MQ=255) aaTGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTtctct < 1:1031774/141‑2 (MQ=255) aaTGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTcc > 1:122559/1‑141 (MQ=255) tGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaa < 1:896550/141‑1 (MQ=255) tGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaa < 1:800323/141‑1 (MQ=255) tGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaa < 2:115175/141‑1 (MQ=255) gTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaac < 1:776552/141‑1 (MQ=255) tAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaacc < 1:965990/141‑1 (MQ=255) tAACACCGTTACTCCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaacc < 1:69242/141‑1 (MQ=255) acacCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaaccaa > 1:969797/1‑141 (MQ=255) acacCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaaccaa < 1:664269/141‑1 (MQ=255) cacCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAAt < 2:75631/141‑1 (MQ=255) acCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTTCAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAAtt < 1:537405/141‑1 (MQ=255) ccGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTa > 1:966819/1‑141 (MQ=255) cATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTaa > 2:378237/1‑141 (MQ=255) tACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATg < 1:595811/141‑1 (MQ=255) cTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTTTTTTTTGTATTGTTCATCATTTGTTCACTATCATCATGCGTTCTCCAACCAATTACACTCGGTAATTTCg > 2:436773/1‑141 (MQ=255) tGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGaa < 1:196407/141‑1 (MQ=255) tGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGaa < 1:363035/141‑1 (MQ=255) tCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACct > 1:39708/1‑141 (MQ=255) cTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctg > 1:306535/1‑141 (MQ=255) ataaACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCCTTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctggaa > 1:514430/1‑141 (MQ=255) ataaACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctggaa > 2:993513/1‑141 (MQ=255) ataaACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctggaa > 2:772692/1‑141 (MQ=255) taaACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctggaac < 1:598135/141‑1 (MQ=255) taaACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctggaac > 1:435663/1‑141 (MQ=255) ccACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctggaactgga > 1:135762/1‑141 (MQ=255) ccACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctggaactgga > 2:592145/1‑141 (MQ=255) aCGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAAt > 1:244282/1‑141 (MQ=255) aCGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAAt > 1:192197/1‑141 (MQ=255) cGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATg > 2:153260/1‑141 (MQ=255) cGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATg > 1:660154/1‑141 (MQ=255) tGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGAc < 1:753284/141‑1 (MQ=255) acacTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGaa < 1:371296/141‑1 (MQ=255) cacTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAAt > 2:1075945/1‑141 (MQ=255) cctctAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATg < 1:341136/140‑1 (MQ=255) acTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATg < 2:1070050/141‑1 (MQ=255) acTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATg < 1:656416/141‑1 (MQ=255) acTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATg < 2:723776/141‑1 (MQ=255) ctAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCtt > 2:334694/1‑141 (MQ=255) ctAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCtt > 2:334725/1‑141 (MQ=255) tAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCttt < 1:613619/141‑1 (MQ=255) aaaCCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTa < 2:39708/141‑1 (MQ=255) aaaCCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTa > 2:734348/1‑141 (MQ=255) aaaCCTAGTAAGCCTCCACCAATTACAATTGCTTTCTTTTTATTCTTCGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTa < 1:10851/141‑1 (MQ=255) aCCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTTGTTTTTTCATTGTTCATCATTTGTTCAGTATCATCAAGGGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGCACGCGCATGACGAATGCTTTAGa > 2:380577/1‑141 (MQ=255) aCCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTTGAACCTGGAACTGGAATGACTAATGCTTTAGa > 2:758948/1‑141 (MQ=255) cTAGTAATTGTCCGCCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAGCCAATTACGCGCTGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAAc < 2:40150/141‑1 (MQ=255) cTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAAc < 2:915917/141‑1 (MQ=255) cTAGTAAGCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTCGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAAc > 2:714685/1‑141 (MQ=255) tAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGATTGCTTTaaaaaaaaa < 2:680110/141‑6 (MQ=255) tcctccACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCCAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGc < 2:932731/141‑1 (MQ=255) ctccACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACATGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCaa > 1:602293/1‑141 (MQ=255) accaATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAAt < 2:969931/141‑1 (MQ=255) aTTACAATTGCTTTCTTTTTAGTCTTCGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAAt > 2:536682/1‑141 (MQ=255) aTTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAAt > 1:766419/1‑141 (MQ=255) tACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAAttt > 1:256316/1‑141 (MQ=255) aaTTGCTTTCTTTTTAGTCTTCGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATc < 1:637284/141‑1 (MQ=255) aTTGCTTTCTTTTTAGTTTTAGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCg > 2:876844/1‑141 (MQ=255) ttGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGt < 2:821376/141‑1 (MQ=255) gCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTAt < 1:57376/141‑1 (MQ=255) gCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGAAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTAt < 2:941862/141‑1 (MQ=255) ctttctttTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATg < 2:353557/141‑1 (MQ=255) ctttctttTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATg > 1:420222/1‑141 (MQ=255) ctttctttTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATg > 1:1015153/1‑141 (MQ=255) tttctttTTAGTCTTCGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGa < 2:93644/141‑1 (MQ=255) tctttTTAGTCTTCGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATa > 2:607321/1‑141 (MQ=255) ctttTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATAc < 1:553186/141‑1 (MQ=255) ctttTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATAc > 2:576484/1‑141 (MQ=255) ttttAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACtt > 2:351785/1‑141 (MQ=255) tttAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAAAAAAAAAAAAAAAAATCAATTTATCGTATGATACTTc < 2:1048522/141‑1 (MQ=255) ttAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAAAAAAAAAAAAAAATCAATTTATCGTATGATACTTCa < 2:664617/141‑1 (MQ=255) attCTTTGTAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAAt > 2:104047/3‑141 (MQ=255) aGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAAt > 2:128396/1‑141 (MQ=255) gTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATa > 1:397855/1‑141 (MQ=255) gTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATa < 2:435663/141‑1 (MQ=255) gTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATa > 1:556818/1‑141 (MQ=255) tCTTCGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCCGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAAAAAAAAAAAAAAAAATCAATTTATCGTATGATACTTCAATAc < 2:541588/141‑1 (MQ=255) tCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATAc < 1:486103/141‑1 (MQ=255) tCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACATGTCGCAAAAATCAATTTATCGTATGATACTTCAATAc < 2:965099/141‑1 (MQ=255) tCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAAAAAAAAAAAAAAATCAATTTATCGTATGATACTTCAATAc < 2:904481/141‑1 (MQ=255) aaTGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGc < 1:639917/141‑1 (MQ=255) aaTGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGc < 2:412584/141‑1 (MQ=255) ttCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGCagta < 2:946927/141‑1 (MQ=255) catcatTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGCagtagt < 1:643377/141‑1 (MQ=255) tttGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGCAGTAGTAACtg > 1:931420/1‑141 (MQ=255) ttGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGCAGTAGTAACtga < 1:743820/141‑1 (MQ=255) tGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGCAGTAGTAACtgat < 1:1001151/141‑1 (MQ=255) cAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGCAGTAGTAACtgattgat < 1:888793/141‑1 (MQ=255) gTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGCAGTAGTAACTGATTGAttt > 2:414840/1‑141 (MQ=255) gTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGCAGTAGTAACTGATTGAttt < 2:77132/141‑1 (MQ=255) tATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAACCAATTTATCGTATGATACTTCAATACCATTTGCAGTAGTAACTGATTGATTTg < 1:547884/141‑1 (MQ=255) atcataCAGCGTTCTCCAACCAATTACACTCGTTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGCAGTAGTAACTGATTGATTTGc < 2:200096/141‑1 (MQ=255) catcaAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATAGTCTGCTACTTAAATACCATTTGAAGAAGTAACTGATTGATTTGctc > 1:585188/1‑141 (MQ=255) atcaAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAAGCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGCAGTAGTAACTGATTGAttttatct > 2:1026028/1‑136 (MQ=255) caAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGCAGTAGTAACTGATTGATTTGCtctat < 2:490658/141‑1 (MQ=255) | TCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATACCATTTGCAGTAGTAACTGATTGATTTGCTCTAT > CP000730/2524099‑2524375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |