| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 2760340 | 40 (1.080) | 3 (0.090) | 3/236 | NT | 6.9% | coding (659/1371 nt) | citM | CitMHS family citrate‑magnesium (Mg2+):proton (H+) citrate‑calcium (Ca2+):proton (H+) symporter |
| ? | CP000730 | = 2760395 | 44 (1.300) | coding (604/1371 nt) | citM | CitMHS family citrate‑magnesium (Mg2+):proton (H+) citrate‑calcium (Ca2+):proton (H+) symporter | |||||
ATAGAATAACAGCTAAAGTTAAAGCTGTATTCACCCATTTTATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2760194‑2760340‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtttgcggtaTATCTTGGATTTAAAGAACAGAAACGTATCAAAAAAGCAATAGAGAGAAATGAATTACCGCAAACACAAGATATAGATGTACATAAATTAGTTGAAGTATATGAACGAGATCAAGATGTAAGGTTTCCTGTAA < CP000730/2760395‑2760263 ATAGAATAACAGCTAAAGTTAAAGCTGTATTCACCCATTTTATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTT > 2:354973/1‑141 ATAACAGCTAAAGTTAAAGCTGTATTCACCCATTTTATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGT < 1:27758/141‑1 GTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTATATCTTGGATTTAAAGAACAGAAACGTATCAAAAAAGCGATAGAGAGAAATGAATTA < 1:320905/141‑1 TTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTATATCTTGGATTTAAAGAACAGAAACGTATCAAAAAAGCAATAGAGAGAAATGAATTACCGC < 2:436010/141‑1 TTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTATATCTTGGATTTAAAGAACAGAAACGTATCAAAAAAGCAATAGAGAGAAATGAATTACCGCAAACACAAGATATAGATGTAC < 1:3169/141‑1 TTGCGGTATATCTTGGATTTAAAGAACAGAAACGTATCAAAAAAGCAATAGAGAGAAATGAATTACCGCAAACACAAGATATAGATGTACATAAATTAGTTGAAGTATATGAACGAGATCAAGATGTAAGGTTTCCTGTAA > 1:207935/1‑141 TTGCGGTATATCTTGGACGCAACAAACATAAACGTATCAAAAAAGCAATAGAGAGAAATGAATTACCGCAAACACAAGATATAGATGTACATAAATTAGTTGAAGTATATGAACGAGATCAAGATGTAAGGTTTCCTGTAA > 2:111461/1‑141 ATAGAATAACAGCTAAAGTTAAAGCTGTATTCACCCATTTTATCCATGATTTTGTTCTTGCACGTCCTTTTACAGGAAACCTTACATCTTGATCTCGTTCATATACTTCAACTAATTTATGTACATCTATATCTTGTGTTTGCGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2760194‑2760340‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtttgcggtaTATCTTGGATTTAAAGAACAGAAACGTATCAAAAAAGCAATAGAGAGAAATGAATTACCGCAAACACAAGATATAGATGTACATAAATTAGTTGAAGTATATGAACGAGATCAAGATGTAAGGTTTCCTGTAA < CP000730/2760395‑2760263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |