Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 591,934 Δ1 bp 5.3% coding (2150/3624 nt) rpoC → DNA‑directed RNA polymerase subunit beta'

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730591,9340A. 5.3% 255.3 / 7.9 76coding (2150/3624 nt)rpoCDNA‑directed RNA polymerase subunit beta'
Reads supporting (aligned to +/- strand):  ref base A (44/28);  new base . (2/2);  total (46/30)
Fisher's exact test for biased strand distribution p-value = 6.45e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01

GATAAGCAACAAATACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATGGCCGCACCATCTGGTAAGATTA  >  CP000730/591798‑592071
                                                                                                                                        |                                                                                                                                         
gATAAGCAACAAATACTTGATGAGCATGAAAAATTAGTCGCCAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGt                                                                                                                                       >  1:185315/1‑141 (MQ=255)
gATAAGCAACAAATACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGt                                                                                                                                       >  1:237478/1‑141 (MQ=255)
gATAAGCAACAAATACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGt                                                                                                                                       >  1:173614/1‑141 (MQ=255)
gATAAGCAACAAATACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGt                                                                                                                                       >  1:169912/1‑141 (MQ=255)
gATAAGCAACAAATACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGt                                                                                                                                       >  1:18490/1‑141 (MQ=255)
  tAAGCAACAAATACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGa                                                                                                                                     >  2:144050/1‑141 (MQ=255)
    aGCAACAACTACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAAt                                                                                                                                   >  2:215419/1‑141 (MQ=255)
    aGCAACAAATACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAAt                                                                                                                                   >  2:443839/1‑141 (MQ=255)
     gCAACAAATACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAAtt                                                                                                                                  >  1:42378/1‑141 (MQ=255)
     gCAACAAATACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAAtt                                                                                                                                  >  1:292373/1‑141 (MQ=255)
      caacaaATACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTg                                                                                                                                 >  2:367461/1‑141 (MQ=255)
         caaATACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATg                                                                                                                              <  2:439315/141‑1 (MQ=255)
         caaATACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATg                                                                                                                              <  2:155965/141‑1 (MQ=255)
         caaATACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATg                                                                                                                              <  2:226236/141‑1 (MQ=255)
                ttGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGCAGGAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCat                                                                                                                       <  1:436028/141‑2 (MQ=255)
                ttGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCAc                                                                                                                       <  2:121375/141‑1 (MQ=255)
                   atgaGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTg                                                                                                                    >  2:318946/1‑141 (MQ=255)
                   atgaGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTg                                                                                                                    >  1:316998/1‑141 (MQ=255)
                       gCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATaa                                                                                                                >  1:335600/1‑141 (MQ=255)
                           gAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGCAATTTGGACAGATGCAAAAGATCAAATTAAAGGTGAATTGATGCAATCACTTGATAAAACt                                                                                                            >  1:92611/1‑141 (MQ=255)
                           gAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACt                                                                                                            <  1:6573/141‑1 (MQ=255)
                            aaaaaTTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGCGAATTGATGCAATCACTTGATAAAACTa                                                                                                           >  2:31691/1‑141 (MQ=255)
                              aaaTTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAAc                                                                                                         >  2:240406/1‑141 (MQ=255)
                                 ttAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCa                                                                                                      <  1:131979/141‑1 (MQ=255)
                                 ttAGTCGAAAGAATTACAAAACAATTCAACCGTGGTTTAATCACAGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCa                                                                                                      <  1:357663/141‑1 (MQ=255)
                                        aCAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCa                                                                                               <  1:440699/141‑1 (MQ=255)
                                              ttACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATTTTCAtgatga                                                                                         >  1:144815/1‑141 (MQ=255)
                                              ttACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAg                                                                                        >  2:68397/1‑141 (MQ=255)
                                              ttACAAAACAATTCAACCGCGGTATAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAg                                                                                        >  2:460461/1‑141 (MQ=255)
                                                  aaaaCAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGa                                                                                     <  2:259003/141‑1 (MQ=255)
                                                   aaaCAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGAt                                                                                    <  2:42879/141‑1 (MQ=255)
                                                       aaTTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAg                                                                                <  2:100362/141‑1 (MQ=255)
                                                             aCCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGGTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCGTCATGAGGAGTGAGTCAGGTGccc                                                                          >  2:160063/1‑141 (MQ=255)
                                                                 tGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTgg                                                                      <  2:214933/141‑1 (MQ=255)
                                                                     ttAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAAc                                                                  >  1:103879/1‑141 (MQ=255)
                                                                     ttAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAAc                                                                  >  2:257921/1‑141 (MQ=255)
                                                                     ttAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAAc                                                                  >  2:367310/1‑141 (MQ=255)
                                                                     ttAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAAc                                                                  >  1:29753/1‑141 (MQ=255)
                                                                     ttAAGCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTTAAGGTGAATTGATGCAATTACTTGATAAAACTAACCCAATTTTCATGATGAGTGATTCAGGTGCCCGTGGTacc                                                                  >  2:253056/1‑139 (MQ=255)
                                                                      tAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACg                                                                 <  2:117563/141‑1 (MQ=255)
                                                                      tAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACg                                                                 <  2:73563/141‑1 (MQ=255)
                                                                      tAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACg                                                                 <  2:446257/141‑1 (MQ=255)
                                                                      tAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACg                                                                 <  2:185315/141‑1 (MQ=255)
                                                                      tAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACg                                                                 <  2:169912/141‑1 (MQ=255)
                                                                      tAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTGCATGATGAGTGATTCAGGTGCCCGTGGTAACg                                                                 <  2:18490/141‑1 (MQ=255)
                                                                        aTCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCa                                                               <  1:81671/141‑1 (MQ=255)
                                                                        aTCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCa                                                               <  2:453216/141‑1 (MQ=255)
                                                                           aCTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGTCCGTGGTAACGCATCt                                                            >  1:80711/1‑141 (MQ=255)
                                                                                 gaagaaAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACttt                                                      <  1:167498/141‑1 (MQ=255)
                                                                                     aaagaTATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTacac                                                  >  1:442828/1‑141 (MQ=255)
                                                                                       agaTATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAg                                                <  2:229398/141‑1 (MQ=255)
                                                                                        gaTATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGt                                               >  1:57154/1‑141 (MQ=255)
                                                                                        gaTATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGt                                               >  1:277011/1‑141 (MQ=255)
                                                                                             aaTGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGGGGTAACGCATCTAGCTTTACAGAGTTAGCa                                          >  1:15551/1‑141 (MQ=255)
                                                                                             aaTGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGGGATTCAGGTGCCCGTGGTCACGCATCTAACTTTACACAGTTAGCa                                          >  1:330985/1‑141 (MQ=255)
                                                                                                      gttgAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGt                                 >  2:300085/1‑141 (MQ=255)
                                                                                                       ttgAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTg                                <  1:318946/141‑1 (MQ=255)
                                                                                                       ttgAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTg                                <  2:316998/141‑1 (MQ=255)
                                                                                                         gAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGa                              >  1:157560/1‑141 (MQ=255)
                                                                                                         gAAATTTGGACAGATGCAAAAGATCAAATTCAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGAt                             <  1:68397/141‑1 (MQ=255)
                                                                                                         gAAATTTGGACAGATGCAAAAGATCAAATTCAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGAt                             <  1:460461/141‑1 (MQ=255)
                                                                                                          aaaTTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGAt                             >  1:15178/1‑141 (MQ=255)
                                                                                                                ggACAGCTGCAACAGATCAAATTCAAGGTGAATTGATGCAATCACATGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATgg                       >  2:112664/1‑141 (MQ=255)
                                                                                                                ggACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATgg                       >  2:245346/1‑141 (MQ=255)
                                                                                                                ggACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATgg                       >  1:227829/1‑141 (MQ=255)
                                                                                                                  aCAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATGGcc                     >  1:166623/1‑141 (MQ=255)
                                                                                                                  aCAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATGGcc                     >  2:415084/1‑141 (MQ=255)
                                                                                                                         cAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATGGCCGCACCAt              >  2:354212/1‑141 (MQ=255)
                                                                                                                         cAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGAGTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATGGCCGCACCAt              >  2:434872/1‑141 (MQ=255)
                                                                                                                           aaaGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATGGCCGCACCATCt            >  1:211012/1‑141 (MQ=255)
                                                                                                                           aaaGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATGGCCGCACCATCt            >  1:181035/1‑141 (MQ=255)
                                                                                                                           aaaGAGCAAATGCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGAATCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATGGCCGCACCATCt            <  2:369646/141‑1 (MQ=255)
                                                                                                                                 cAAATTCAAGGTGAATTGATGCAAGCACTTGATAAAACTAACCCAATCTTAATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATGGCAGCACCATCTGGTAAg      >  2:193629/1‑141 (MQ=255)
                                                                                                                                    aTTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATGGCCGCACCATCTGGTAAGAtt   <  2:292373/141‑1 (MQ=255)
                                                                                                                                     ttCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATGGCCGCACCATCTGGTAAGAttt  >  1:27003/1‑140 (MQ=255)
                                                                                                                                     ttCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATGGCCGCACCATCTGGTAAGATTa  <  2:355206/141‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                         
GATAAGCAACAAATACTTGATGAGCATGAAAAATTAGTCGACAGAATTACAAAACAATTCAACCGTGGTTTAATCACTGAAGAAGAAAGATATAATGCAGTTGTTGAAATTTGGACAGATGCAAAAGATCAAATTCAAGGTGAATTGATGCAATCACTTGATAAAACTAACCCAATCTTCATGATGAGTGATTCAGGTGCCCGTGGTAACGCATCTAACTTTACACAGTTAGCAGGTATGCGTGGATTGATGGCCGCACCATCTGGTAAGATTA  >  CP000730/591798‑592071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: