Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 951,713 G→T 9.8% intergenic (+218/‑90) USA300HOU_0915 → / → rocD flavin reductase/ornithine‑‑oxo‑acid transaminase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730951,7130GT 9.8% 174.4 / 2.6 72intergenic (+218/‑90)USA300HOU_0915/rocDflavin reductase/ornithine‑‑oxo‑acid transaminase
Reads supporting (aligned to +/- strand):  ref base G (25/38);  new base T (6/2);  total (31/41)
Fisher's exact test for biased strand distribution p-value = 7.18e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.14e-01

AGTAAAATATACTTTTGATTAAGTGTAAAATTATCAATTCTTTTGCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGTTAACAAATCATTACGGAGCACAT  >  CP000730/951575‑951853
                                                                                                                                            |                                                                                                                                            
tgttatgtataCTTTTGATTAAGTGTAAAATTATCGATTCTTTTGCTTGTCATCATTTATGTAATTATGTCATGATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTtggt                                                                                                                                            <  2:723203/134‑1 (MQ=255)
       tataCTTTTGATTAAGTGTAAAATTATCAATTCTTTTGCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAg                                                                                                                                     >  1:11089/1‑141 (MQ=255)
       tataCTTTTGATTAAGTGTAAAATTATCAATTCTTTTGCTTATAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGTTGGAAAAg                                                                                                                                     >  2:967688/1‑141 (MQ=255)
               tGATTAAGTGTAAAATTATCAATTCTTTTGCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCt                                                                                                                             <  1:783167/141‑1 (MQ=255)
                       tgtAAAATTATCAATTCTTTTGCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAAc                                                                                                                     >  2:540582/1‑141 (MQ=255)
                            aaTTATCAATTCTTTTGCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATg                                                                                                                <  1:548759/141‑1 (MQ=255)
                            aaTTATCAATTCTTTTGCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATg                                                                                                                <  2:1013796/141‑1 (MQ=255)
                             aTTATCAATTCTTTTGCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGt                                                                                                               >  1:926827/1‑141 (MQ=255)
                                aTCAATTCTTTTGCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAat                                                                                                            >  1:801699/1‑141 (MQ=255)
                                  cAATTCTTTTGCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAatta                                                                                                          >  1:301377/1‑141 (MQ=255)
                                  cAATTCTTTTGCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAatta                                                                                                          >  2:1020877/1‑141 (MQ=255)
                                    aTTCTTTTGCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAattatt                                                                                                        >  2:216521/1‑141 (MQ=255)
                                      tCTTTTGCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGCAattcttag                                                                                                      >  2:631979/1‑139 (MQ=255)
                                            gCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTTTTTTTTTTTTATCTGCTTTGAAAACTAATGTAATTAttttggtgat                                                                                                >  2:106090/1‑134 (MQ=255)
                                            gCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAAt                                                                                                <  1:365138/141‑1 (MQ=255)
                                            gCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAAATTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAATATCTGCTTTGAAAACTAATGTAATGATTTGGATAAt                                                                                                <  2:1003819/141‑1 (MQ=255)
                                             cTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATg                                                                                               >  1:388057/1‑141 (MQ=255)
                                               tGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGtt                                                                                             >  1:398290/1‑141 (MQ=255)
                                                  aaTCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCa                                                                                          <  2:56153/141‑1 (MQ=255)
                                                      aTTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGta                                                                                      >  1:431734/1‑141 (MQ=255)
                                                          aaGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTataat                                                                                  <  2:80117/141‑1 (MQ=255)
                                                           agtaagtaCGTGATTATAAATGTAAGGGTTTTCAAAAAAGACAAATGTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCGTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTataata                                                                                 <  2:876047/141‑1 (MQ=255)
                                                           aatAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTataata                                                                                 <  2:420123/139‑1 (MQ=255)
                                                           aGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTataata                                                                                 >  1:307973/1‑141 (MQ=255)
                                                             tAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGt                                                                               >  1:347421/1‑141 (MQ=255)
                                                             tAATTAAGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGt                                                                               <  2:1017203/141‑1 (MQ=255)
                                                             gaaTTATGGCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGt                                                                               <  1:188943/140‑1 (MQ=255)
                                                                   tGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATaaa                                                                         <  1:58792/141‑1 (MQ=255)
                                                                        ttattaATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAatgatg                                                                    <  1:19535/141‑1 (MQ=255)
                                                                           taAATGTAAGGGTTTTCAAAATAGCCAAATTTAATGCAAAACCAAGCGTTTTTCCTCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGaaa                                                                 <  1:344601/141‑1 (MQ=255)
                                                                           taAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGACACGTCTCTGCTTTGCACACTAATGCCATTCTTCGGATAATGTTTCATGTCTCATCGTTATAAATGATGaaa                                                                 >  1:216885/1‑141 (MQ=255)
                                                                                gTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGGGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATGTGGATCATGTTTCATGTATAGTAGTTATAAATGATGAAAAgggg                                                            >  1:957922/1‑141 (MQ=255)
                                                                                gTAAGGATTTTCAAAATAGACAAAATTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGGTTCATGTATAATAGTTATAAATGATGAAAAgggg                                                            <  2:1008651/141‑1 (MQ=255)
                                                                                   aGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGgaga                                                         >  1:198061/1‑141 (MQ=255)
                                                                                    gggTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGat                                                        <  1:156180/141‑1 (MQ=255)
                                                                                    gggTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGat                                                        <  1:893226/141‑1 (MQ=255)
                                                                                        tttCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATatga                                                    <  1:1023214/141‑1 (MQ=255)
                                                                                          taaaaaTAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTGTTTGTAAATATTAAGCTGGTTTGAAAACTAATGTAATTATTTGGATAATTTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATatgatg                                                  <  1:504069/139‑1 (MQ=255)
                                                                                          tCAAAATAGATAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGTTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATatgatg                                                  <  2:640901/141‑1 (MQ=255)
                                                                                           cAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATatgataa                                                 >  1:347097/1‑139 (MQ=255)
                                                                                           cAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATAtgatga                                                 >  1:68587/1‑141 (MQ=255)
                                                                                            aaaaTAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGAc                                                <  1:331240/141‑1 (MQ=255)
                                                                                            aaaaTAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGAc                                                <  1:917374/141‑1 (MQ=255)
                                                                                              aaTAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTa                                              <  2:11089/141‑1 (MQ=255)
                                                                                                  gACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTTTTTTTTTTTTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGTTGAAATGGTGAGATAGGATGACTAAAta                                          >  2:1021449/1‑140 (MQ=255)
                                                                                                    cAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTg                                        <  2:611663/141‑1 (MQ=255)
                                                                                                    aaaaTTTAATG‑‑AAACTAAATAATTAATTCATCTTTATTAGAGAAAAAGTATCTGCTTATAAAACTAAAGAAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAAATATGATGACTAAATCTg                                        <  2:154372/140‑1 (MQ=255)
                                                                                                           aaTG‑‑GAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAat                                 >  2:735661/1‑141 (MQ=255)
                                                                                                           aaTG‑‑AAACTTAGTGATTATTTCATCTTTTTTTTTTTTTTTTTATCTGCTTTGAAACCTACTGTAATTTTGTGGATTATGTTTCATGTATAATATTTTTATTTGATCTAAAGAGAATTTATGATGATTAATTCTTAAAAAat                                 >  2:568581/1‑141 (MQ=255)
                                                                                                           aaTG‑‑AAACTTAGTGATTATTTCATCTTTTTTTTTTGAAAAGTATCTACTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGGTGAAAAGGGGAGTTATGATGCCTAAATCTGaataagt                                 >  2:6223/1‑139 (MQ=255)
                                                                                                           aaTG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAat                                 <  2:102261/141‑1 (MQ=255)
                                                                                                            aTG‑‑AAACTTAGTGATTATTTCATCTTTTTTTTTTTTTTTTTATCTGCTTTGAGAACTAATGTAATTATTTGGGTAATGTTTCTTGTATAATAGTTATATATGATGCAAAGAGGTGATATGATGACTAAATCTGATAAAatt                                >  2:1032100/1‑141 (MQ=255)
                                                                                                            aTG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAatt                                <  1:820452/141‑1 (MQ=255)
                                                                                                             tG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAatta                               <  1:587129/141‑1 (MQ=255)
                                                                                                              g‑‑AAACTTAGTGATTATTTCCTATTTTTTGGTGGAAAAGTATCTGACTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATCACTAAATCTGAAAAAattat                              <  1:744549/141‑1 (MQ=255)
                                                                                                              g‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGAGAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAattat                              <  1:557277/141‑1 (MQ=255)
                                                                                                               ataaaaTTAGAGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGTTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTAAAAAAAATAAAAAGGGGAGATATGATGACTAAATCTGAAAAAatta                               <  2:549689/139‑1 (MQ=255)
                                                                                                                   aCTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTTTTAATGTTGCAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGa                           <  1:1048096/141‑1 (MQ=255)
                                                                                                                    cTTATTGATTACTTCATCTTTTTTGGTTGAAATGTATCGGTTCTTAAGACGAATTTATTTATTGTGATAATTTTTCATGTATAATAGTTATAAAATAAGAAAAGGGCAGATAAGATGACTAAATCATAAAAAATGATTGat                          <  2:301721/141‑2 (MQ=255)
                                                                                                                     ttAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGt                         <  2:619546/141‑1 (MQ=255)
                                                                                                                     tatgTGATTATTTTATTTTTTTTTGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGt                         <  2:283092/138‑1 (MQ=255)
                                                                                                                      tAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGtt                        <  1:31773/141‑1 (MQ=255)
                                                                                                                         tGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGTTAAc                     >  1:440005/1‑141 (MQ=255)
                                                                                                                         tGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGTTAAc                     <  2:603687/141‑1 (MQ=255)
                                                                                                                          gATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGTTAACa                    >  1:738703/1‑141 (MQ=255)
                                                                                                                                ttCATCTTTTTGGGTGGAAAAGGTTCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGTTAACAAATCAt              <  2:174319/141‑1 (MQ=255)
                                                                                                                                 tCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGTTAACAAATCAtt             >  2:713386/1‑141 (MQ=255)
                                                                                                                                  cATCTTTTTTTTTTTAAAATTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGTTAACAAATCATTa            >  2:351059/1‑141 (MQ=255)
                                                                                                                                  cATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATTATGACTAAATCTGAAAAAATTATTGAGTTAACAAATCATTa            <  1:727923/141‑1 (MQ=255)
                                                                                                                                   aTCTTTTTTGCTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGTTAACAAATCATTAc           <  1:105924/141‑1 (MQ=255)
                                                                                                                                        ttttGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGTTAACAAATCATTACGGAGc      <  1:451675/141‑1 (MQ=255)
                                                                                                                                         tttGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATTATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGTTAACAAATAATTACGGAGca     >  2:826891/1‑141 (MQ=255)
                                                                                                                                         tttGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGTTAACAAATCATTACGGAGca     >  1:595662/1‑141 (MQ=255)
                                                                                                                                           tggtggAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGTTAACAAATCATTACGGAGcata   >  1:4872/1‑139 (MQ=255)
                                                                                                                                            ggtggAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGTTAACAAATCATTACGGAGCACAt  <  2:388057/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                            
AGTAAAATATACTTTTGATTAAGTGTAAAATTATCAATTCTTTTGCTTGTAATCATTTAAGTAATTATGTCATTATAAATGTAAGGGTTTTCAAAATAGACAAATTTAATG‑‑AAACTTAGTGATTATTTCATCTTTTTTGGTGGAAAAGTATCTGCTTTGAAAACTAATGTAATTATTTGGATAATGTTTCATGTATAATAGTTATAAATGATGAAAAGGGGAGATATGATGACTAAATCTGAAAAAATTATTGAGTTAACAAATCATTACGGAGCACAT  >  CP000730/951575‑951853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: