| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2085296 = | 39 (0.690) | 12 (0.240) | 12/232 | NT | 21.9% | intergenic (‑558/‑400) | mapW2/USA300HOU_1944 | cell surface protein MapW2/hypothetical protein |
| ? | CP000730 | = 2128343 | 51 (1.010) | intergenic (+57/+1062) | int/USA300HOU_2011 | bacteriophage integrase/possible leukocidin subunit | |||||
AAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACTTTA > CP000730/2085156‑2085435 | ctacatccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctat > 1:370081‑M1/141‑141 (MQ=255)ctacatccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgtagttacaaggtttctat < 2:550234‑M1/1‑1 (MQ=255) tacatccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagaatgtaatttagggacccattagggactccaaacccaataaatactgttgtaacaaagtatctaTg < 2:218030‑M1/2‑1 (MQ=255) aaaaaaGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTg > 2:478348/1‑141 (MQ=255) aaaaaaGTTGCAACACTTGCAGTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTg < 2:485007/141‑1 (MQ=255) catccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTa > 1:649782‑M1/138‑141 (MQ=255) aaaGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTAt < 2:519633/141‑1 (MQ=255) aaaGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTAt < 1:328279/141‑1 (MQ=255) tccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaagacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATc < 1:442706‑M1/6‑1 (MQ=255) tccgtgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATc > 1:212332‑M1/136‑141 (MQ=255) aaGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATc < 1:149749/141‑1 (MQ=255) ccggtaattctcaattcttagaagaaaaatttactgaagaggacaaaaaaacagctaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATcc > 2:367007‑M1/135‑141 (MQ=255) cgtgcattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCa > 1:606911‑M1/134‑141 (MQ=255) tgtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCaaa < 1:204374‑M1/10‑1 (MQ=255) ggtatgtgtatttgttagaagaaaaattgaatgaagaggagaaaaaaacaactaaaattttagaaagtatgtaatgtagggacccattagggactccaagcccgatagatactgttgttacaaggtttctaTGTATCCaaa > 2:583243‑M1/132‑141 (MQ=255) gtattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAAc > 1:617527‑M1/131‑141 (MQ=255) atattctcatttgttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAAc < 2:433310‑M1/11‑1 (MQ=255) tattctcatatgttagaagaaaaattttatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttgtaTGTATCCAAACt < 2:243487‑M1/12‑1 (MQ=255) cAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACt < 2:519346/141‑1 (MQ=255) attctcatttgttagaagaaaaatttaataaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTg > 2:77609‑M1/129‑141 (MQ=255) aacaattgttagaagaaaaaattaaaaaaaaaaaaaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGgag > 2:423356‑M1/126‑141 (MQ=255) gttagaagaaaaatttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGtatccaaactgcttacttttg > 2:577354‑M1/119‑131 (MQ=255) gCAAATTTAGTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACa < 2:33263/141‑1 (MQ=255) tattattaGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAAtt > 1:26179/1‑141 (MQ=255) attattaGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTa < 1:122417/141‑1 (MQ=255) attattaGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTa < 1:288670/141‑1 (MQ=255) atttaatgaagaggacaaaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATtaa < 1:163381‑M1/35‑2 (MQ=255) taGATGGTGCACTTACTGACAATAGTACCAAAGCCGAATCTAAGAAAGATGATACAAATTAGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTAcaaaa < 2:469397/141‑5 (MQ=255) aGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑c < 2:494101/141‑1 (MQ=255) cTTACTGACATCAGTGCCAAAGCCAAATCTAAGTAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAg < 1:235341/141‑1 (MQ=255) ttACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGATTTTTAACATAAAATTACTTAT‑CATTCAAAAAGt < 2:110919/141‑1 (MQ=255) aaaaaacaactaaaattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTa > 1:246167‑M1/90‑141 (MQ=255) gTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCTAAACTGGCGACTTTTAACATAAATTTACATAT‑CCTTCAACAAGTAAAACAGCaaaa > 1:301257/1‑141 (MQ=255) gTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATACAAAGTGGAGACTTTTAACATAACATCACTTAT‑ACTTCAAAAAGTAAAACAGCataa > 1:587006/1‑141 (MQ=255) gTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAATTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCataa > 1:46310/1‑141 (MQ=255) tGCCAAAGCCGAATCTAAGAAAGATGATACTTATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCataat < 1:446670/141‑1 (MQ=255) tGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCataat > 2:480713/1‑141 (MQ=255) aattttagaaagtatgtaatttagggacccattagggactccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCataata > 1:614995‑M1/77‑141 (MQ=255) accGAATCT‑AGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGt < 2:464646/140‑1 (MQ=255) ccGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCACACTGGAGACTTTTAACATAAAATTACTTCTCCCTCCAAAAAGCAGATC‑GCATAAGATCAAGGt > 2:636213/1‑141 (MQ=255) cGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGtt < 1:465119/141‑1 (MQ=255) cGAACCCAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGGATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGtt < 1:238819/141‑1 (MQ=255) aTCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTtat < 2:656103/141‑1 (MQ=255) gatACTGGTTTGAAGTGAGTTAGTCATAACGTTTATANGTTATCGACCGTTTTGTATCCAAACTGGTGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTGAAACAGCATAATATCAAGGTTTATAACTttatcatta < 2:497839/141‑1 (MQ=255) gatACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTttatcatta < 2:400311/141‑1 (MQ=255) tACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGGTATCGCCCGGTTTGTATCCAAACTGGAGACGTTTAACATAAAATTACTTAT‑CATTCAAATAGTAAAACAGCATAAGATCAAGGTTTATAACTtcatcatgatc < 2:510518/141‑1 (MQ=255) aCTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTttatcattatca > 1:76461/1‑141 (MQ=255) cTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCaa < 1:73666/141‑1 (MQ=255) tGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCaat < 2:309944/141‑1 (MQ=255) tttagggactctaaaccctataaatactgttgttaccaggtgtctaAGTCTCCAAACTGGAGAGTTTTAACATAAAATTACTTAT‑CATACAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCaata > 2:351863‑M1/47‑141 (MQ=255) gttagttaGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTGTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCa > 1:402444/1‑141 (MQ=255) ccaaacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCata > 1:351333‑M1/37‑141 (MQ=255) aacccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCTTTATCAATAATACCTCATctaa < 2:348841‑M1/108‑1 (MQ=255) acccaataaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATataaa < 1:298760‑M1/109‑1 (MQ=255) gtCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATataaaat > 2:400989/1‑141 (MQ=255) gtCATAACCGTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGGAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATataaaat < 1:192200/141‑1 (MQ=255) atCAAAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATataaaat < 1:283945/140‑1 (MQ=255) cATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATataaaataa < 1:101995/141‑1 (MQ=255) cccgtacatatGCCATAGACAGTATTGTATCCACTAAGGCGACTTTTAACATCAAATTACTTAA‑CATTCAAACAGTAAAACCGCAACATACCACGGATTATAACTTTCTCATTATCAATAATACCTCATctaaaataacct > 2:180138/8‑138 (MQ=255) aaatactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAATAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATaaaataaaat > 2:596616‑M1/26‑141 (MQ=255) aaCGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATaaaataaaat < 1:479270/141‑1 (MQ=255) aaCGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATaaaataaaat < 2:311620/141‑1 (MQ=255) tactgttgttacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAtttt < 2:390566‑M1/119‑1 (MQ=255) gTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAtttt > 1:319255/1‑141 (MQ=255) ttATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttag < 1:612027/141‑1 (MQ=255) atatGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAtttttggg < 1:480713/141‑1 (MQ=255) tatGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttaggga > 1:660438/1‑141 (MQ=255) tatGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttaggag > 1:288795/1‑139 (MQ=255) gttacaaggtttctaTGTATCCAAGCGGGGGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAattttagagaca < 2:371315‑M1/126‑2 (MQ=255) tacaaggtttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggccttt < 1:25942‑M1/128‑1 (MQ=255) gtttttaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttaggg > 2:204374‑M1/8‑141 (MQ=255) ttctaTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttagggac > 1:560047‑M1/6‑141 (MQ=255) gtgttGTATCCAAACTGGAGACGTTTAACATAAAATAACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAAttttagggactttttagggact < 2:106186/138‑1 (MQ=255) tttGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAAGAGCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTttagggactttttagggacttt < 1:318751/141‑1 (MQ=255) ttGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAACATAAAATTTTAGGGACTTTTTAGGGACttta > 2:120910/1‑141 (MQ=255) ttGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACttta > 2:111903/1‑141 (MQ=255) tTGTATCCAGACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATaaaataaaattttatggactttttatggcattta < 2:584096‑M1/140‑10 (MQ=255) aTGGATCCAAACTGGAAACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTGTTTAGGGACttta < 2:559411‑M1/140‑1 (MQ=255) | AAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACTTACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTATCGACCGTTTTGTATCCAAACTGGAGACTTTTAACATAAAATTACTTAT‑CATTCAAAAAGTAAAACAGCATAATATCAAGGTTTATAACTTTATCATTATCAATAATACCTCATATAAAATAAAATTTTAGGGACTTTTTAGGGACTTTA > CP000730/2085156‑2085435 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |