| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description | 
| RA | CP000730 | 1,929,812 | G→A | 59.8% | intergenic (‑895/‑273) | USA300HOU_1794 ← / → USA300HOU_1796 | hypothetical protein/hypothetical protein | 
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 1,929,812 | 0 | G | A | 59.8% | 31.0 / 57.3 | 57 | intergenic (‑895/‑273) | USA300HOU_1794/USA300HOU_1796 | hypothetical protein/hypothetical protein | 
| Reads supporting (aligned to +/- strand): ref base G (13/10); new base A (19/15); total (32/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
TACTTTCTTAAATTAACAATATCTATTCTCATAGAATTTGTCCAATTAAGTGTAGACGATTCAATCTATCAGCTAGAATCATATAACTTATCAGAAGCAAGTGACTGTGCTTGTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑TGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGCTAAGTAGAC  >  CP000730/1929677‑1929948                                                                                                                                       |                                                                                                                                            tACTTGTTTAAATTAACAAGATCTATTCTCATAGAATTTGTCCATTTAAGTGTAGACGATTCAATCTATCAGCTGGAAGCATATAACTTATCAGAAGCAAGTGACTGTGCTTGTATATTTGCCGATGATATAATAGTaga                                                                                                                                          <  2:160247/140‑1 (MQ=37)          aaTTAACAATATCTATTCTCATAGAATTTGTCCAATTAAGTGTAGACGATTCAATCTATCAGCTAGAATCATATAACTTATCAGAAGCAAGTGACTGTGCTTGTATATTTGACGATGATATAATAGTAGAGTCGC‑CTAtc                                                                                                                               >  1:135504/1‑140 (MQ=255)                       tATTCTCATAGAATTTGTCCAATTAAGTGTAGACGATTCAATCTATCAGCTAGAATCATATAACTTATCAGAAGCAAGTGACTGTGCTTGTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCaa                                                                                                                  >  1:63304/1‑140 (MQ=255)                                  aaTTTGTCCAATTAAGTGTAGACGATTCAATCTATCAGCTAGAATCATATAACTTATCAGAAGCAAGTGACTGTGCTTGTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCag                                                                                                       <  1:287278/140‑1 (MQ=255)                                     ttGTCCAATTAAGTGTAGACGATTCAATCTATCAGCTAGAATCATATAACTTATCAGAAGCAAGTGACTGTGCTTGTATATTTGCCGATGATATCATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAAACGCacaga                                                                                                    >  2:71650/1‑140 (MQ=255)                                       gTCCAATTAAGTGTAGACGATTCAATCTATCAGCTAGAATCATATAACTTATCAGAAGCAAGTGACTGTGCTTGTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAgagg                                                                                                  >  1:319219/1‑140 (MQ=255)                                              tAAGTGTAGACGATTCAATCTATCAGCTAGAATCATATAACTTATCAGAAGCAAGTGACTGTGCTTGTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACTCAGAGAGGAGGTGta                                                                                           <  1:238047/140‑1 (MQ=255)                                                     aGACGATTCAATCTATCAGCTAGAATCATATAACTTATCAGAAGCAAGTGACTGTGCGAGTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTCTCTCTCAGGCGTCAATTTCGACGCAGAGAGGAGGGGTA‑TAA‑GG‑Tg                                                                                 >  2:152419/1‑140 (MQ=255)                                                                  tATCAGCTAGAATCATATAACTTATCAGAAGCAAGTGACTGTGCTTGTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑TGATGCTTATTTTCg                                                                    <  1:51659/140‑1 (MQ=255)                                                                    tCAGCTAGAATCATATAACTTATCAGAAGCAAGTGACTGTGCTTGTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑TGATGCTTATTTTCGtt                                                                  >  1:178377/1‑140 (MQ=255)                                                                            aaTCATATAACTTATCAGAAGCAAGTGACTGTGCTTGTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑TGATGCTTATTTTCGTTCAcatcat                                                          <  2:297655/140‑1 (MQ=255)                                                                                    aaCTTATCAGAAGCAATTGACTGTGCTTGTATATTTGCCGATGATATAATAGTAGAGTAGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑TGATGCTTATTTTCGTTCACATCATAGCACCAg                                                  <  1:273982/140‑1 (MQ=255)                                                                                           cAGAAGCAAGTGACTGTGCTTGTATATTTACCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑TGATGCTTATTTTCGTTCACATCATAGAACCAGTCATCAg                                           >  2:86032/1‑140 (MQ=255)                                                                                                ggaagtagatatgCTTGTATGTTCACAGCTGGTATAATAATAGAATCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTGCACATCATAGCACCAGTCATCAGTGGCtg                                     >  2:175165/12‑140 (MQ=255)                                                                                                ggaagtagatatgCTTGTATGTTCACAGATGGTATAATAATAGATTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTGTCGTTCACAGCATAGCACCAGTCATCAGTGGcgg                                     >  2:175161/12‑138 (MQ=255)                                                                                                ggaagtagatatgCTTGTATATTCACAGATGGTATAATAATCGAGTCGC‑ATATCTCTCGGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCGGTGGCtg                                     >  1:84332/12‑140 (MQ=255)                                                                                                ggaagtagatatgCTTGTATATTCACAGATGGTATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCtg                                     <  2:251844/129‑1 (MQ=255)                                                                                                ggaagtagataggCTTGTATATTCACAGATGGTATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCtg                                     <  2:122064/128‑1 (MQ=255)                                                                                                gCAAGTGACTGTGCTTGTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑TGATGCTTATTTACGTTCACATCATAGCACCAGTCATCAGTGGCt                                      >  2:178940/1‑140 (MQ=255)                                                                                                 gaagtagatatgCTTGTATATTCACAGATGGTATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCtgt                                    >  2:109822/11‑140 (MQ=255)                                                                                                 gaagtagatatgCTTGTATATTCACAGATGGTATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCtgt                                    <  1:250714/130‑1 (MQ=255)                                                                                                 gaagtagatatgCTTGTATATTCACAGATGGTATAAGAATAGAGGCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCtgt                                    <  2:44671/130‑1 (MQ=255)                                                                                                  aagtagatatgCTTGTATATTCACAGATGGTATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCtgtg                                   <  2:221723/131‑1 (MQ=255)                                                                                                  aagtagatatgCTTGTATATTCACAGATGGTATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCA‑TTACTT‑TGCTAATCATTTCCGTTCACATCATACCACCAGTCATCAGTGGCcgtg                                   >  1:28533/10‑140 (MQ=255)                                                                                                  aagtagatatgCTTGTATATTCACAGATGGTATAAAAATAGAG‑CGCTGAAGCTCCCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCtgtg                                   <  1:24688/131‑1 (MQ=255)                                                                                                  aagtagatatgCTTGTATATTCACAGACGGTATAATAATAGAGGCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGAATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCtgtg                                   <  1:295832/131‑1 (MQ=255)                                                                                                    gtaggtatgCTTGTATATTCACAGATGGTATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGct                                 >  2:194116/8‑139 (MQ=255)                                                                                                    gtagatatgCTTGTATATTCACAGATGGTATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGct                                 <  1:40409/133‑2 (MQ=255)                                                                                                     tatctatgCTTGTATATTCACACATGGTATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCA‑TTA‑CTTTGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGctg                                <  2:289206/134‑3 (MQ=255)                                                                                                     tatatatgCTTGTATATTCACAGATGGTATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGctg                                <  2:57970/134‑3 (MQ=255)                                                                                                     tGACTGTGCTTGTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑TGATGGTTATTTTCGTTCACATCATAGCACCAGTCATCAATGGCTGTGcc                                 >  2:51782/1‑140 (MQ=255)                                                                                                        atatgCTTGTATATTCACAGATGGTATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGctgttg                             >  2:299884/4‑135 (MQ=255)                                                                                                         tatgCTTGTATATTCACAGATGGTATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGctgttgc                            >  2:297183/3‑134 (MQ=255)                                                                                                         aatgCTTGTATATTCACAGATGGTATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCAACAGTCATCAGTGGCTGTGctgtttc                            >  2:133674/3‑134 (MQ=255)                                                                                                            gtttctataCTCGCAGATGCTAAAATCGTAGTGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑AG‑TGTTTCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGt                          <  1:139485/135‑1 (MQ=255)                                                                                                             cTTGTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGGGGTGTA‑TAA‑GG‑TGATGCTTATTTTCGTTCACATCATAGCACCCGTCATCATTGGCTGTGCCATTGCGtt                         >  2:106957/1‑140 (MQ=255)                                                                                                             cTTGTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑TGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGAGGATGTGCCATTGCGtt                         >  2:264549/1‑140 (MQ=255)                                                                                                              ttGTATATTCACAGATGGTATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGtatt                       <  2:164329/140‑4 (MQ=255)                                                                                                                gTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑TGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGttttt                      >  1:251582/1‑140 (MQ=255)                                                                                                                    atTTGCCGATGATATAATAGTATAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑CGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCt                  <  1:81347/140‑1 (MQ=255)                                                                                                                    atTTGCCGAGGATACAATAGTAGAGTCGC‑CTATTTCACAGGCGTCAACTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑GGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCt                  <  1:81341/140‑1 (MQ=255)                                                                                                                      tcacagatggtATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTAt               >  1:128815/6‑140 (MQ=255)                                                                                                                        acagatggtATAATAATAGAGACGC‑CTATCTCTCAGGCGTAAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTACTCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTCTGCTGTTGCGTATTCTAATTATTg             >  2:266247/4‑140 (MQ=255)                                                                                                                           gatggtATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCA‑TTACTT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGtttactaagccaataag          <  2:196909/140‑15 (MQ=255)                                                                                                                           gatggtATAATAATAGAGTCGC‑CTAGCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCt          <  1:170002/140‑1 (MQ=255)                                                                                                                           gatgatATAATAGTAGAGGCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑TGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGc           <  1:38697/140‑1 (MQ=255)                                                                                                                            atggtataATAATAGTGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCA‑TTACAT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtt         >  1:238649/5‑139 (MQ=255)                                                                                                                            atggtATAATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCGGTGCTGTTGCGTATTATCCTTAATGGCtt         >  2:11187/1‑139 (MQ=255)                                                                                                                             tggtataATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtta        <  2:313900/137‑3 (MQ=255)                                                                                                                             tggtataATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCtta        >  1:182508/4‑138 (MQ=255)                                                                                                                             tgatATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑TGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGCTa         >  1:292239/1‑140 (MQ=255)                                                                                                                              ggtataATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCAGATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCttat       >  1:84081/3‑137 (MQ=255)                                                                                                                               gtataATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCTTAGt      <  2:298587/139‑1 (MQ=255)                                                                                                                               gtataATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCTTAGt      >  1:77348/2‑140 (MQ=255)                                                                                                                               gtataATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTAGCTGTGCTGTTGCGTATTATACTTATTGGCTTAGt      >  1:92515/2‑140 (MQ=255)                                                                                                                               gtataATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCA‑TTACTT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCTTAGt      >  1:37199/2‑140 (MQ=255)                                                                                                                                tataATAATAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCA‑TTACTT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCTTAGTa     >  2:74675/1‑140 (MQ=255)                                                                                                                                 ataataataGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCttaataa    >  1:164251/1‑134 (MQ=255)                                                                                                                                 ataataataGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCA‑TTA‑CTTTGCTAATCATTTTCGTTCACATCAGAGCACCCGTCATCAGTGGCTGTGCGGTTGCGTATTATACTTATTGACTTAGTat    >  1:133564/1‑139 (MQ=255)                                                                                                                                  tgataataGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCTTAGTaaa   <  1:268648/138‑3 (MQ=255)                                                                                                                                  taataaTAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCA‑TTACTT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCTTAGTaaa   <  1:204825/140‑3 (MQ=255)                                                                                                                                   aataatAGAGTCGC‑CTATCTCTCAGGCGTCAATT‑‑GACGAAGAGAGGAGGTGCATTAC‑TT‑TGCTAATCATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCTGTTGCGTATTATACTTATTGGCTTAGTaaac  <  1:104433/140‑4 (MQ=255)                                                                                                                                       |                                                                                                                                            TACTTTCTTAAATTAACAATATCTATTCTCATAGAATTTGTCCAATTAAGTGTAGACGATTCAATCTATCAGCTAGAATCATATAACTTATCAGAAGCAAGTGACTGTGCTTGTATATTTGCCGATGATATAATAGTAGAGTCGC‑CTATCTCTCAGGCGTCAATTTAGACGCAGAGAGGAGGTGTA‑TAA‑GG‑TGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGCTAAGTAGAC  >  CP000730/1929677‑1929948 | 
| Alignment Legend | 
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG | 
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑ |