Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 478,502 C→A 100% D342E (GAC→GAA USA300HOU_0457 → NADH dehydrogenase (ubiquinone)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730478,5020CA100.0% 212.6 / ‑6.5 72D342E (GAC→GAAUSA300HOU_0457NADH dehydrogenase (ubiquinone)
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base A (23/48);  total (23/49)
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

TTCAATGTGCATTGGGTGTATATTCAGCAGCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGACGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTCTAGGATGGTCATTACTTGTATCTTGGAATCA  >  CP000730/478366‑478639
                                                                                                                                         |                                                                                                                                         
tttattgttccttGGGTGTATATTCAGCAGCGTTTATTCCTTTAATGTTGCACGGTATTTTTAAAGCAATATTATTTTTCCAATCAGGTTCCATCGTGAGGCGATTCAATCTTCTAAAACAAGCGTCTGGTAAAGAAGCtt                                                                                                                                       <  2:307484/130‑1 (MQ=255)
ttCAATGTGCATTGGGTGTATATTCAGCAGCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCtt                                                                                                                                       <  2:247545/141‑1 (MQ=255)
ttCAATGTGCATTGGGTGTATATTCAGCAGCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCtt                                                                                                                                       <  2:122059/141‑1 (MQ=255)
  cAATGTGCATTGGGTGTATATTCAGCTGCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTAt                                                                                                                                     <  1:758947/141‑1 (MQ=255)
  cAATGTGCATTGGGTGTATATTCAGCAGCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTAt                                                                                                                                     >  1:43793/1‑141 (MQ=255)
     tgtgCATTGGGTGTATATTCAGCAGCGATTATTAATTTAAGATAGCAAGGCATATGTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAACTTCTGGc                                                                                                                                  >  1:181700/1‑141 (MQ=255)
      gttgaTTGGGGGGATATTCAGCAGCGATTATTCATTTAATTTTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCt                                                                                                                                 <  2:125662/137‑1 (MQ=255)
      gtccATTGGGTGTAAATTCAGCAGCGATTACTCATTTATTATTGCACCTTATTTTTAAAGCCACATTATTTTTTCAATCAGTTCCTATCGTGAAGCGATTCAAGATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCt                                                                                                                                 <  2:213758/138‑1 (MQ=255)
          aTTGGGTGTATATTCAGCAGCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGAt                                                                                                                             <  1:19781/141‑1 (MQ=255)
            tGGGTGTATATTCAGCAGCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGGTTg                                                                                                                           >  1:546670/1‑141 (MQ=255)
            tGGGTGTATATTCAGCAGCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTg                                                                                                                           >  1:452340/1‑141 (MQ=255)
              ggTGTATATTCAGCAGCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCCAAACAAGCATCTGCTAAAGAAGCTTCTGGCTGGATTGTc                                                                                                                         >  2:638997/1‑141 (MQ=255)
               gtgtTTATTCAGCAGCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCa                                                                                                                        <  2:125123/141‑1 (MQ=255)
                 gtATATTCAGCAGCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATg                                                                                                                      >  1:212288/1‑141 (MQ=255)
                   atatTCAGCAGCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATggg                                                                                                                    >  1:438020/1‑141 (MQ=255)
                    tatTCAGCAGCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGa                                                                                                                   <  1:335653/141‑1 (MQ=255)
                        cagcagCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACgtg                                                                                                               <  1:538850/141‑1 (MQ=255)
                           cagcGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACTTTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTAt                                                                                                            >  2:280002/1‑141 (MQ=255)
                              cGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAg                                                                                                         <  1:25668/141‑1 (MQ=255)
                                tttagttaTTTAATATTGCACGGTATTTTTAACGTCACATTATTTTTACATTCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCt                                                                                                       <  2:512854/134‑1 (MQ=255)
                                     tCATTTAATCTTGCACGGTATTTTTAAAGCAACCTTCTTTTTACACTCCGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGTCTGGATTGCCATGAGACGTGTATTAGCtcttat                                                                                                  >  2:235794/1‑141 (MQ=255)
                                       aTTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCg                                                                                                <  2:211566/141‑1 (MQ=255)
                                             tatTGCACGGTTTTTTTAAAGCGACGTTATTGTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCAt                                                                                          <  2:347360/141‑1 (MQ=255)
                                              atTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCAtt                                                                                         <  1:763403/141‑1 (MQ=255)
                                              atTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCCTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCAtt                                                                                         <  2:116330/141‑1 (MQ=255)
                                               ttGCACGGTATTTTTAAAGGGACTGATTTGTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCAttt                                                                                        <  1:15099/141‑1 (MQ=255)
                                                tGCACGGTATTTTTATAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTc                                                                                       >  1:575529/1‑141 (MQ=255)
                                                 gCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCt                                                                                      >  1:377541/1‑141 (MQ=255)
                                                   atggTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTAt                                                                                    <  1:705821/139‑1 (MQ=255)
                                                   aCGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTAt                                                                                    <  1:519170/141‑1 (MQ=255)
                                                          ttttAGAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAACGATTCAACATTTCAAGACAAGCATCTGCTAAAGAAGCTTATAGCTGGATTATCATGGGGAGTGTATTAGCGATTATCGTGGCATTGCTATTTTGGag                                                                             >  2:133756/1‑140 (MQ=255)
                                                          ttttAAAGCAACGTTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGAt                                                                             <  1:21269/141‑1 (MQ=255)
                                                              aaaGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTCTTATCGTGGCATTTCTATTTTGGATGagt                                                                         >  2:253181/1‑141 (MQ=255)
                                                               aaGCAACACTATTTTTACAATCAGGTTCTATCGTGAAGCGCTTCAATATTCCAAAACAAGCATCTGATAAAGAAGCTTATGGCTGGATTGTCATGGGCCGTGTATTAGCTATTATCGTGGCATTTCTTTTTTGGATGagtg                                                                        >  2:328720/1‑140 (MQ=255)
                                                                   aaCATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGa                                                                    <  2:157777/141‑1 (MQ=255)
                                                                    aCATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATGCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGAc                                                                   <  1:205795/141‑1 (MQ=255)
                                                                      attattTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAg                                                                 <  2:375672/141‑1 (MQ=255)
                                                                      attattTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAg                                                                 <  2:308917/141‑1 (MQ=255)
                                                                            ttctaccagcAGGTTCTATCGTAAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTg                                                            <  1:268080/132‑1 (MQ=255)
                                                                            tttACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGc                                                           <  1:14857/141‑1 (MQ=255)
                                                                            tttACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGc                                                           <  1:720829/141‑1 (MQ=255)
                                                                             ttgaCAATCCGGTTCTATCGGGAATCGATTGACTATTCCAATACAAGCAGCTGCTAAAGAAGCTTATGGCTGGACTGTCATGGGACGTGTAGTAGCTATTATCTTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGc                                                           <  1:724209/138‑1 (MQ=255)
                                                                                 cAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCatag                                                       >  1:196127/1‑140 (MQ=255)
                                                                                    tCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGACGTGCATATGaa                                                    >  1:588155/1‑141 (MQ=255)
                                                                                    tCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAACATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGaa                                                    >  2:509224/1‑141 (MQ=255)
                                                                                         ttCTATCGTGAAGCGATTCAATATTCCAAAACAAGCTTCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGtt                                               <  1:627676/141‑1 (MQ=255)
                                                                                         ttCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGCAGTGACAGATGCGCATATGATGTGtt                                               <  2:452340/141‑1 (MQ=255)
                                                                                          tCTATCGTGGAGCGATTCAATATTCCAAAACACGCATCTTCTAAAGAAGCTTATGGCTTGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTa                                              <  1:697337/141‑1 (MQ=255)
                                                                                          tCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTa                                              <  2:713276/141‑1 (MQ=255)
                                                                                            tATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAg                                            >  2:344305/1‑141 (MQ=255)
                                                                                                gTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCa                                        >  1:410490/1‑141 (MQ=255)
                                                                                                gTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCa                                        <  1:372691/141‑1 (MQ=255)
                                                                                                 tGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGCCGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCCTATGCAGTGTTAAGTGCAc                                       <  1:161890/141‑1 (MQ=255)
                                                                                                       gATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTc                                 <  1:638066/141‑1 (MQ=255)
                                                                                                       gATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTc                                 <  2:43793/141‑1 (MQ=255)
                                                                                                       gATTCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTc                                 <  1:126982/141‑1 (MQ=255)
                                                                                                          tCAATATTCCAAAACAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTCTAg                              <  1:173497/141‑1 (MQ=255)
                                                                                                           ccagaatCCAAAACAAGCATCTGCTAAAGCAGCCTACGGCTGGATTGTCATGGGACGTGGAGTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTCAAGTGCACTCATTCTAgg                             <  1:687409/135‑1 (MQ=255)
                                                                                                               atTCCAAAACCAGCATCTGTTAAATAAGCGTAAGGCTGGATTGTCATGGGACGTGTATTAGCTATTATAGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTCTAGGATgg                         <  1:158994/141‑1 (MQ=255)
                                                                                                                     aaaCAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTCTAGGATGGTCATTa                   >  2:146544/1‑141 (MQ=255)
                                                                                                                     aaaCAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTCTAGGATGGTCATTa                   >  2:146519/1‑141 (MQ=255)
                                                                                                                      aaCACGCATCTGCGAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTCTAGGATGGTCATTAc                  <  2:602779/141‑1 (MQ=255)
                                                                                                                      aaCAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTCTAGGATGGTAATTAc                  >  1:228798/1‑141 (MQ=255)
                                                                                                                       aCAAGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTTCATATGAAGTGTTAAGTGCACTCATTCTAGGATGGTCATTACt                 <  1:267091/141‑1 (MQ=255)
                                                                                                                         aaGCATCTGCTAAAGAATCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTCTAGGATGGTCATTACTTg               <  2:482662/141‑1 (MQ=255)
                                                                                                                          aGCATCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGACGTGCATATGAAGTGTTAAGTGCACTCATTCTAGGATGGTCATTACTTGt              <  1:148266/141‑1 (MQ=255)
                                                                                                                           tcATCTGCTATAGACGCTGTTGGCTGGATTGTCATGGGACGTTTATTAGCTATTATCCTTGCATTTCTATTTTGTATTGGTTGTGGCAGTACTGCTGATGAGGTGTTAAGTGCATTCTTGCTAGGTTGGTCATTACTTgca             <  2:287085/140‑3 (MQ=255)
                                                                                                                           gCAGCTGCTAAAGAAGCTTATGGCTGGATTGTCGTTGTACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGAGGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTCTAGGATGGTCATTACTTGTa             <  1:638997/141‑1 (MQ=255)
                                                                                                                             aTCTGCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTCTAGGATGGGCATGACTTGTATc           >  1:121024/1‑141 (MQ=255)
                                                                                                                                tGCTAAAGAAGCTTATGGCTTGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTCTAGGATGGTCATTACTTGTATCTTg        <  2:752552/141‑1 (MQ=255)
                                                                                                                                 gCTAAAGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTCTAGGATGGTCATTACTTGTATCTTgg       <  2:575529/141‑1 (MQ=255)
                                                                                                                                      aGAAGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACGCATTCTAGGATGGTCATTACTTGTATCTTGGAATCa  <  2:286300/141‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                         
TTCAATGTGCATTGGGTGTATATTCAGCAGCGATTATTCATTTAATATTGCACGGTATTTTTAAAGCAACATTATTTTTACAATCAGGTTCTATCGTGAAGCGATTCAATATTCCAAAACAAGCATCTGCTAAAGACGCTTATGGCTGGATTGTCATGGGACGTGTATTAGCTATTATCGTGGCATTTCTATTTTGGATGAGTAGTGACAGAAGTGCATATGAAGTGTTAAGTGCACTCATTCTAGGATGGTCATTACTTGTATCTTGGAATCA  >  CP000730/478366‑478639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: