Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 2,010,363 C→T 100% C146Y (TGT→TAT)  USA300HOU_1861 ← ABC superfamily ATP binding cassette transporter, membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007302,010,3630CT100.0% 246.9 / NA 75C146Y (TGT→TAT) USA300HOU_1861ABC superfamily ATP binding cassette transporter, membrane protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (44/31);  total (44/31)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

TTTCACGTGTCAATTTTCTTAATCTTCCAAAGAAAACGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATACAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCGCACTTAAAGCTTGTAAATGGTTGTAT  >  CP000730/2010226‑2010500
                                                                                                                                         |                                                                                                                                         
tttCACGTGTCAATTTTCTTAATCTTCCAAAGAAAACGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAAt                                                                                                                                        >  1:262174/1‑141 (MQ=255)
 ttCACTGGTCAATTTTCGTAATCTTCCAAATAAAACGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATc                                                                                                                                       <  2:347179/141‑1 (MQ=255)
  tCACGTGTCAATTTTCTTAATCTTCCAAAGAAAACGTACACCGTTAAAATGTAAAGTGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAAGCt                                                                                                                                      >  2:329789/1‑141 (MQ=255)
  tCACGTGTCAATTTTCTTAATCTTCCAAAGAAAACGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCt                                                                                                                                      >  2:16424/1‑141 (MQ=255)
    aCGTGTCAATTTTCTTAATCTTCCAAAGAAAACGTACACCGTTAAAATGTAAAATGGGAAGATAGACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTaa                                                                                                                                    >  1:296984/1‑141 (MQ=255)
    aCGTGTCAATTTTCTTAATCTTCCAAAGAAAACGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTaa                                                                                                                                    >  1:223484/1‑141 (MQ=255)
       tgtCAATTTTCTTAATCTTCCAAAGAAACCGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCa                                                                                                                                 <  1:223449/141‑1 (MQ=255)
         tCAATTTTCTTAATCTTCCAAAGACAACGTACACCGTTAAAATGTAAAATGGGAAGATAAACGGTGCTGCTAAAGTCAATTTCCCACTTCATGAGAGCATGATGGGTAGTGCAATACTAATTGTTCTATAATCTAACCaaa                                                                                                                               >  1:440862/1‑141 (MQ=255)
         tCAATTTTCTTAATCTTCCAAAGAAAACGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCaaa                                                                                                                               >  1:88278/1‑141 (MQ=255)
         tCAATTTTCTTAATCTTCCAAAGAAAACGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCaaa                                                                                                                               >  1:445341/1‑141 (MQ=255)
           aaTTTTCTTAATCTTCCAAAGAAAACGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAatt                                                                                                                             >  1:7052/1‑140 (MQ=255)
           aaTTTTCTTAATCTTCCAAAGAAAACGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAata                                                                                                                             >  1:302924/1‑141 (MQ=255)
              tttCTTAATCTTCCAAAGAAAACGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTc                                                                                                                          >  1:449704/1‑141 (MQ=255)
                tCTTAATCTTCCAAAGAAAACGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCAt                                                                                                                        >  2:369513/1‑141 (MQ=255)
                        ttCCAAAAAAAACGTACGCCGTTAACATGTAAAAGGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAATATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCgg                                                                                                                <  2:408795/141‑1 (MQ=255)
                              agaagaCGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGATTaaaa                                                                                                          >  1:525478/1‑141 (MQ=255)
                               gAAAACGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAAt                                                                                                         <  2:105226/141‑1 (MQ=255)
                                  aaCGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGaa                                                                                                      <  1:714119/141‑1 (MQ=255)
                                      tACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCt                                                                                                  >  2:654947/1‑141 (MQ=255)
                                             ttAAAATGTAAAAGGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTtttgttt                                                                                           <  2:35957/141‑1 (MQ=255)
                                              taaaatgtaaaatgGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTtttgtttg                                                                                          <  2:256782/141‑1 (MQ=255)
                                              gaaaatgtaaaatgGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTCATATAATCTAACCAAATATTCACTAACCCGGTTAAAATGAAATCTtttatttg                                                                                          <  2:471861/140‑1 (MQ=255)
                                                   agtaaaatgGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCaa                                                                                     <  2:628890/140‑1 (MQ=255)
                                                    gtaaaatgGGAAGATAGACAGTGCTGCTAAAGCCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCACTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAAc                                                                                    >  1:429229/1‑141 (MQ=255)
                                                    gtaaaatgGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAAc                                                                                    <  1:7/141‑1 (MQ=255)
                                                          tgGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTCACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCAtt                                                                              <  2:767459/141‑1 (MQ=255)
                                                            ggAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTaa                                                                            <  1:187613/141‑1 (MQ=255)
                                                            ggAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTaa                                                                            >  2:758262/1‑141 (MQ=255)
                                                             gAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAGAACAACAGTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGATAAAATGAAATCTTTAGTTTGTTCAAAATCATTaac                                                                           >  2:581744/1‑140 (MQ=255)
                                                                  tAAACAGTGGTGCTAAAGTCAATTTCACATCTAAAAAGATCATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCActc                                                                      <  2:613926/141‑1 (MQ=255)
                                                                  aaaaCAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCActc                                                                      <  2:468238/140‑1 (MQ=255)
                                                                      catggcttctAAAGTCAAATTCACAGCGAAAAAGGACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTCAACAGGCTCACCAAGTAGGAATTGTTTGTTCAACATCATTAATCACTCTAGa                                                                  >  2:741008/5‑141 (MQ=255)
                                                                      cAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTATTCACTCTAGa                                                                  >  2:536358/1‑141 (MQ=255)
                                                                       aGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGat                                                                 <  1:472865/141‑1 (MQ=255)
                                                                        gTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGata                                                                <  1:505409/141‑1 (MQ=255)
                                                                         tgctgcTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGatat                                                               <  2:899/141‑1 (MQ=255)
                                                                            tgctAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTAc                                                            >  1:325932/1‑141 (MQ=255)
                                                                                aaaGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGa                                                        <  1:516398/141‑1 (MQ=255)
                                                                                 aaGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCCCTCTAGATATTACTTGAc                                                       >  1:194995/1‑141 (MQ=255)
                                                                                  aGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTCATCACGCTAGATATTACTTGAcc                                                      <  2:166703/141‑1 (MQ=255)
                                                                                       aTTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACtt                                                 >  1:515340/1‑141 (MQ=255)
                                                                                         ttCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTgg                                               >  1:712369/1‑140 (MQ=255)
                                                                                           cacaTCTAAAAAGAACATTATGGATAGTGCAATAGTAATTGTTCTATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGgtt                                             >  2:129478/1‑141 (MQ=255)
                                                                                               tCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGAttatta                                         <  1:686711/141‑1 (MQ=255)
                                                                                                  aaaaaGGACATTATGGTTTGGACAATAATAATTTTTATATAATCTAACCAAATATTCATTAACCCGGCTAAAGTGAAATCTTTTATTTTTTCAACATCATTAATCACTCCAGATATTACTTTACCTACTTGattatcatca                                      <  2:27889/141‑6 (MQ=255)
                                                                                                  aaaaaGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCa                                      >  2:204462/1‑141 (MQ=255)
                                                                                                   ggaccaaCATTATGGTTTTATCAAGAAAAAATGTTATATAATCTGGCTAAATATTCATGAAGCCGGTTAAAAGGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGAGTATTAGCAt                                     <  2:539969/136‑1 (MQ=255)
                                                                                                   aaaaGAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCAt                                     <  1:647613/141‑1 (MQ=255)
                                                                                                       gAACATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATtaaa                                 >  2:590958/1‑141 (MQ=255)
                                                                                                        aaCATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAAGCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTCTTTGCTTATTAGCTTaaagt                                >  1:590270/1‑139 (MQ=255)
                                                                                                        aaCATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAAt                                <  2:573436/141‑1 (MQ=255)
                                                                                                         aCATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATTAAAtc                               >  1:290321/1‑141 (MQ=255)
                                                                                                         aCATTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAAtc                               >  1:580257/1‑141 (MQ=255)
                                                                                                           aTTATGGATAGTGCAATCGTAATTTTGATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAAtctc                             >  1:570059/1‑141 (MQ=255)
                                                                                                           aTTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATCTTACTTGACCTACTTGATTATTAGCATAAAAtctt                             >  2:763273/1‑140 (MQ=255)
                                                                                                           aTTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAAtctc                             <  2:167688/141‑1 (MQ=255)
                                                                                                           aTTATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAAtatc                             >  1:659224/1‑141 (MQ=255)
                                                                                                            ttATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCg                            >  1:412695/1‑141 (MQ=255)
                                                                                                            ttATGGATAGTGCAATAATAATTGTTATATAATCTAACCAAATATGCATTAACCCCGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATAACTTGACCTACTTGATTATTAGGATAAAATCTCg                            >  1:162018/1‑141 (MQ=255)
                                                                                                                  aaagagCAATAAAAATTATTATATAATCTAACCAAATGTTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGAAATTACTGGACCAACTTGATTATTAGCATAAAATCTCGCACTTa                      <  2:226466/136‑1 (MQ=255)
                                                                                                                  aTAGTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCGCACTTa                      <  2:524851/141‑1 (MQ=255)
                                                                                                                     gTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCGCACTTAAAg                   <  2:493266/141‑1 (MQ=255)
                                                                                                                     gTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCGCACTTAAAg                   >  2:120867/1‑141 (MQ=255)
                                                                                                                     gTGCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACACGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAACATCTCGCTCTTaaaa                   >  1:39138/1‑140 (MQ=255)
                                                                                                                       gCAATAATAATTGTTATATAATCTAACCAAATATTCATTACCCCTGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCGCACTTCAAGca                 <  2:200483/141‑2 (MQ=255)
                                                                                                                       gCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATACAATCTCGCACTTAAAGCt                 >  2:118469/1‑141 (MQ=255)
                                                                                                                       gCAATAATAATTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATAACTCTCGATATTCCTTGACCTACTTGATTATTAGCATCAAATCTCGCACTTTAATCt                 >  1:32069/1‑141 (MQ=255)
                                                                                                                               aatTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAGAATGAAATCTTTTGTTTGTTCAACATCATTAATCTCTCTAAATATTACTTTACCTACTTGATTATTAGCATGAAATCTTGCACTTCAAGCTTGTagttg         >  2:582813/1‑137 (MQ=255)
                                                                                                                               aatTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCGCACTTAAAGCTTGTAAATg         >  2:611411/1‑141 (MQ=255)
                                                                                                                               aatTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCGCACTTAAAGCTTGTAAATg         >  1:282152/1‑141 (MQ=255)
                                                                                                                                atTGTTATATAATCTAACCACCTTTTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCGCACTTAAAGCTTGTAAATgg        >  1:569946/1‑141 (MQ=255)
                                                                                                                                atTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCGCACTTAAAGCTTGTAAATgg        >  1:310323/1‑141 (MQ=255)
                                                                                                                                atTGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCATTAGTTTGTACAACATCATTAATCACTCTAAATATTACTTGACCTACTTGAATATTAGAATAAAAGATCGCACTTAAAGCTTGTACATgt        >  2:48170/1‑140 (MQ=255)
                                                                                                                                  tGTTATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCGCACTTAAAGCTTGTAAATGGtt      <  2:243429/141‑1 (MQ=255)
                                                                                                                                    ttATATAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCGCACTTAAAGCTTGTAAATGGTTGt    <  2:364915/141‑1 (MQ=255)
                                                                                                                                     tatataATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCGCACTTAAAGCTTGTAAATGGTTGta   <  2:610539/141‑1 (MQ=255)
                                                                                                                                     tatataATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCGCACTTAAAGCTTGTAAATGGTTGta   <  1:129084/141‑1 (MQ=255)
                                                                                                                                      atatAATCTAACCAAATATTCATTAACCCGGTGAAAATGAAATCTTTTGATGGTTCAACATCATTAAGCACTCTAGATATTACTTGTACTAGTGAATTATTATAATAAATTCTAGAACTTAAAGTTTGTACATGGTGGtat  >  2:37228/1‑141 (MQ=255)
                                                                                                                                         |                                                                                                                                         
TTTCACGTGTCAATTTTCTTAATCTTCCAAAGAAAACGTACACCGTTAAAATGTAAAATGGGAAGATAAACAGTGCTGCTAAAGTCAATTTCACATCTAAAAAGAACATTATGGATAGTGCAATAATAATTGTTATACAATCTAACCAAATATTCATTAACCCGGTTAAAATGAAATCTTTTGTTTGTTCAACATCATTAATCACTCTAGATATTACTTGACCTACTTGATTATTAGCATAAAATCTCGCACTTAAAGCTTGTAAATGGTTGTAT  >  CP000730/2010226‑2010500

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: