| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 38,405 | C→G | 3.6% | T198S (ACT→AGT) | ugpQ1 → | glycerophosphodiester phosphodiesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 38,405 | 0 | C | G | 3.6% | 353.4 / 3.6 | 114 | T198S (ACT→AGT) | ugpQ1 | glycerophosphodiester phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base C (67/41); new base G (2/2); total (70/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.08e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
GCTTGTTAAACTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATAAAATGGTGCAT > CP000730/38265‑38544 | gCTTGTTAAACTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTAc < 1:23452/141‑1 (MQ=255) ttGTTAAACTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTa > 2:246540/1‑141 (MQ=255) ttGTTAAACTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCAAAACTTACTa > 1:448724/1‑141 (MQ=255) ttGTTAAACTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCAATACCACTCCGATTCTTGAAGACTGGAGAACACTTTTAGATTACTGTAAGGCTAAAATAGTAAACACTGAAGATGCCAAACTTAcga > 2:145397/1‑139 (MQ=255) tGTTAAACTTGCAGAAGAACTCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTaa > 1:544896/1‑141 (MQ=255) gTTAAACTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTaaa > 1:280701/1‑141 (MQ=255) ttAAACTTCCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAg < 1:459970/141‑1 (MQ=255) tAAACTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGCTGCCAAACTTACTAAAGc > 2:811865/1‑141 (MQ=255) aaaCTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCa > 1:224679/1‑141 (MQ=255) cTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCaaaa > 2:731017/1‑141 (MQ=255) cTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCaaaa > 1:743972/1‑141 (MQ=255) cTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCaaaa > 1:359722/1‑141 (MQ=255) cTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCaaaa > 2:658701/1‑141 (MQ=255) cTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCaaaa > 1:855190/1‑141 (MQ=255) cTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTGATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCaaaa > 1:584739/1‑141 (MQ=255) tGCAGAAGAAATCATGCCACAATGTAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGt < 2:515880/141‑1 (MQ=255) tGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGt < 2:89467/141‑1 (MQ=255) tGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGt < 1:285782/141‑1 (MQ=255) agaaATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAAt > 2:887725/1‑141 (MQ=255) aaaTCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAATAAACACTGAAGATGCCAAACTTACTCAAGCAAAAATaaaaccag > 2:475002/1‑137 (MQ=255) acaggCCACAATATAACAGAGCAGTTATATTCCAGACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGCAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTaa < 1:19136/137‑1 (MQ=255) cATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTaaa < 1:198809/141‑1 (MQ=255) aTGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGGACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTaaaa > 1:101227/1‑141 (MQ=255) aTGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTCAAAATGGTaaaa > 1:101220/1‑141 (MQ=255) tgacacaATATGATAGAGCAGGTATATTCCCTACAACTTCGTTTCTAGAAGACTGGAGAACACCTTTAGATTACCGTAATGCTACAATATTAAACACTGAAGACCCCAACCTTACTAAAGCAAAAGTAAAAATGGTAAaag < 2:290436/138‑1 (MQ=255) tGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTaaaaa > 2:111680/1‑140 (MQ=255) tGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAAAACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTTAAGATGCCAAACTTCCTAAAGCAAAAGTAAAACTGGTAAaag > 2:528246/1‑141 (MQ=255) tGCAACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGATAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAATGCAAAAGTAAAAATGGTAAaag < 2:72351/141‑1 (MQ=255) acccACAAAATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAaag < 1:377272/139‑1 (MQ=255) caATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCg > 2:77972/1‑141 (MQ=255) taACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTa < 1:387095/141‑1 (MQ=255) taACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTa > 1:509508/1‑141 (MQ=255) taACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTa > 2:873585/1‑141 (MQ=255) taACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACCGGAGAACACATTTGGATTACTGTAATGCTAAAAAAGTAAACACTGAAGATACCAAACTAACTAAAGCAAAAGTAAAAAAGGAAAAAGAAGCGGGATa > 2:370658/1‑141 (MQ=255) cAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAACCTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGa < 1:860270/141‑1 (MQ=255) aGTTATATGGCATACAACTTCGTTTCGTGAAGGCTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTAATAAAGCAAAGGTAAAAATGGTAAAAGAAGCGGGTGttgaattgaa > 1:294230/1‑141 (MQ=255) gTTATATTCCATACACATTCGTGTTTTGAAGGCTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGTGGGTTATGCATTGAAc > 1:907470/1‑141 (MQ=255) ttATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACg < 2:761613/141‑1 (MQ=255) ttATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACg > 1:486132/1‑141 (MQ=255) atatTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTa > 2:294828/1‑141 (MQ=255) tatTCCATCCAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGAAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTAt > 2:557182/1‑141 (MQ=255) tatTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTAt > 1:899663/1‑141 (MQ=255) cATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTTAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGACAAAGAGGCGGGTTGTGAATTTAACGTATGGACt > 1:245355/1‑141 (MQ=255) cttgctGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCa > 2:237003/6‑141 (MQ=255) ttcgtGCAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATGGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTGATGAATTGAACGTATGACATGTAAGCAAAccgg > 2:17757/1‑139 (MQ=255) tcgtGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTAGTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGc > 2:367584/1‑141 (MQ=255) tcgtGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTAGTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGc > 2:263226/1‑141 (MQ=255) aaGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTg < 1:748595/141‑1 (MQ=255) tGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAAc < 1:577368/141‑1 (MQ=255) ggAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAGAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCCGCACGAGCAAAcc > 1:445904/1‑141 (MQ=255) acacTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACtt > 2:208712/1‑141 (MQ=255) ttttAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTa > 1:50039/1‑141 (MQ=255) ttAGATTACTGTAATGCAAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAAt < 1:202365/141‑1 (MQ=255) tAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAAtt > 2:708076/1‑141 (MQ=255) tAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAAtt > 2:363503/1‑141 (MQ=255) gATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTgg < 2:424983/141‑1 (MQ=255) gATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTgg < 1:256708/141‑1 (MQ=255) aTTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAACTGAACGTATGGACTGTAAACAAACCAGCACGTGTCAACCAACTTGCTAATTggg < 1:591096/141‑1 (MQ=255) ttATTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTgggg < 1:192497/141‑1 (MQ=255) aCTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAg > 1:779328/1‑141 (MQ=255) tattGCTAAAAGAGTAAACAGTGAATATGCAAAGATGACTACAGCAAAAGTAAAAATGGTAAACGCAGCGGGTTATGAATTGAACGTATGGACTGTAATCCAGACAGCGCGTGCAAACCGACTTGCTAATTGGGGAGTTGa < 2:305685/138‑1 (MQ=255) tAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGa < 2:305705/141‑1 (MQ=255) aTGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATg > 2:274621/1‑141 (MQ=255) aTGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGATAATTGGGGAGTTGATg > 2:811961/1‑141 (MQ=255) aTGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCAAGTGCAAACCAACTTGCTAATTGGGGAGTTGATg > 1:802984/1‑141 (MQ=255) aTGCTAAAATAGTAAAAACTGTATATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTACTAATTGGGGAGTTGATg > 2:882828/1‑141 (MQ=255) tAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTAt < 1:221127/141‑1 (MQ=255) aaaaTAGTAAACACGGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATc < 2:519054/141‑1 (MQ=255) aaTAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCACCTTGATAATTGGGGAGTCGAAGGTGTCtt > 2:172906/1‑141 (MQ=255) aGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTAc > 2:178039/1‑141 (MQ=255) aGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTAc < 1:603672/141‑1 (MQ=255) aGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGATGATGGTATCTTTAc > 1:888046/1‑141 (MQ=255) tAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAACAGACGCACTTTAGGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAg < 1:661609/141‑1 (MQ=255) tAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAg < 2:840776/141‑1 (MQ=255) acacTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAATAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACa > 2:591482/1‑141 (MQ=255) acacTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACa > 1:605446/1‑141 (MQ=255) gAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCa > 1:37090/1‑141 (MQ=255) aaGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAg < 2:160854/141‑1 (MQ=255) aaGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCAGGTTAAGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGaaaaaaaaa < 2:89138/141‑6 (MQ=255) gATGCCAAACTTAGTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGAt < 1:367584/141‑1 (MQ=255) gATGCCAAACTTAGTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGAt < 1:263226/141‑1 (MQ=255) aTGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGTGTTGATGGTATCTTTCCAGACAGTCCAAATa > 1:847430/1‑141 (MQ=255) aTGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTAGATGGTATCTTTACAGACAATGCAGATa > 1:633373/1‑141 (MQ=255) aTGCCAAACTTACTAAAGAAAAAGTAAAAATGGTAAACGAAGCGGGTTATGAATTGAAAGTATGGCCTGTAAACAAACCAGAACGTGAACACCAACTCGCTAAATGGGGAGTTGATGGTATCTTTACAAACAATGCAGATa > 1:186065/1‑141 (MQ=255) tGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATaa > 2:515498/1‑141 (MQ=255) tGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATaa > 2:752118/1‑141 (MQ=255) cacgcagaCTAAAGCAAAAGGAAAAATGGTAATAGAGGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCCCGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATAAAAt < 1:16567/134‑1 (MQ=255) cAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGACTTGAACGTATGGACTGTACACAAACCAGCACGTGCCAACCAACTTGCTAATTGGGGCGTTGATGGTTTTGTTATTTATAATGCAGATagaag > 2:408408/1‑140 (MQ=255) cAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATAAAAt < 1:774147/141‑1 (MQ=255) cAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATAAAAt < 1:129704/141‑1 (MQ=255) aaaCTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATAAAATg > 2:703538/1‑141 (MQ=255) ttACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATAAAATGGTGc < 2:131745/141‑1 (MQ=255) ttACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATAAAATGGTGc < 2:855190/141‑1 (MQ=255) ttACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATAAAATGGTGc < 2:547566/141‑1 (MQ=255) ttACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATAAAATGGTGc < 1:475002/141‑1 (MQ=255) ctACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATAAAAAggacg < 2:8817/140‑4 (MQ=255) aCTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACCGACAACGCAGATAAAATGGTGCAt > 2:163056/1‑141 (MQ=255) aCTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATAAAATGGTGCAt < 1:873585/141‑1 (MQ=255) aCTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCCAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATAAAATGGTGCAt < 1:256885/141‑1 (MQ=255) aCTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGAGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATAAAATGGTGCAt < 1:370658/141‑1 (MQ=255) | GCTTGTTAAACTTGCAGAAGAAATCATGCCACAATATAACAGAGCAGTTATATTCCATACAACTTCGTTTCGTGAAGACTGGAGAACACTTTTAGATTACTGTAATGCTAAAATAGTAAACACTGAAGATGCCAAACTTACTAAAGCAAAAGTAAAAATGGTAAAAGAAGCGGGTTATGAATTGAACGTATGGACTGTAAACAAACCAGCACGTGCAAACCAACTTGCTAATTGGGGAGTTGATGGTATCTTTACAGACAATGCAGATAAAATGGTGCAT > CP000730/38265‑38544 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |