BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP000730	75,007	C→T	7.7%	M1M (ATG→ATA) †	argR1 ←	arginine repressor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	75,007	0	C	T	7.7%	346.0 / 2.5	121	M1M (ATG→ATA) †	argR1	arginine repressor
Reads supporting (aligned to +/- strand): ref base C (53/56); new base T (9/2); total (63/58)
Fisher's exact test for biased strand distribution p-value = 5.50e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 123 total aligned reads displayed.

TTGTAAGTCACGAGAAATAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTAATTATAAGTAGATTATTTTATGCCTAAA  >  CP000730/74869‑75147

ttGTAAGTCACGAGAAATAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCAt                                                                                                                                            <  1:74978/141‑1 (MQ=255)

  gTAAGTCACGAGAAATAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCAttt                                                                                                                                          <  1:2386/141‑1 (MQ=255)

   tAAGTCACGAGAAATAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCAtttt                                                                                                                                         <  2:265852/141‑1 (MQ=255)

    tagccACGAGAAATAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCAttttt                                                                                                                                        <  2:446781/137‑1 (MQ=255)

     aGTCACGAGAAATAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGCTTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTtta                                                                                                                                       <  2:281563/141‑1 (MQ=255)

     aGTCACGAGAAATAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATACCCGTTCAGATAAGATTTAAACGTTTTTCTTTTTTCATTTcta                                                                                                                                       >  2:264564/1‑141 (MQ=255)

       tCACGAGAAATAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTttatt                                                                                                                                     <  1:379548/141‑1 (MQ=255)

         aCGAGAAATAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTATAATGATTCTGTTGTATAACAGTTAAGTTAAGATTTAAAGGTTTTTCTTTTTTGATTTTTTTTAc                                                                                                                                   >  2:24334/1‑141 (MQ=255)

          cGAGAAATAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTAcc                                                                                                                                  >  1:842697/1‑141 (MQ=255)

          cGAGAAATAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTAcc                                                                                                                                  >  2:813102/1‑141 (MQ=255)

             aaaaTAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTAccccc                                                                                                                               <  2:811583/140‑1 (MQ=255)

              aaaTAGTTGTCAAGCTATAGTAAACTCCTAAATGTCTTGCCATGTAATCCACTAGTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCt                                                                                                                              >  1:589445/1‑141 (MQ=255)

                aTAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAGGATTTAAACGTTTTTCTTTTTTCTTTTTTTTTCCCCCtttt                                                                                                                            >  2:283200/1‑141 (MQ=255)

                aTAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCTTTTTTATTACCCCCttt                                                                                                                            >  2:472535/1‑141 (MQ=255)

                aTAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCttt                                                                                                                            >  2:911428/1‑141 (MQ=255)

                aTAGTTACCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCttt                                                                                                                            >  2:504103/1‑141 (MQ=255)

                 tAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTtta                                                                                                                           >  2:648779/1‑141 (MQ=255)

                          ttcTAGAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGGTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTg                                                                                                                  <  2:223967/139‑1 (MQ=255)

                           gCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCtttttttgtagtta                                                                                                                 >  1:205575/1‑133 (MQ=255)

                           gCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTATTCATTTTTATAACGCCATttcttcagttctt                                                                                                                 >  1:657529/1‑133 (MQ=255)

                            cTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCTTTTTTATTACCCCCTTTATTATTTTTGAt                                                                                                                >  2:839287/1‑141 (MQ=255)

                              ataGTAAAGTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTa                                                                                                              <  1:459869/141‑1 (MQ=255)

                              ataGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGAttt                                                                                                              >  2:511687/1‑140 (MQ=255)

                                  tAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTGTTACCCCATTTATTATTTTTGCttcggaa                                                                                                          >  1:98000/1‑136 (MQ=255)

                                  tAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATTaa                                                                                                          >  1:367601/1‑141 (MQ=255)

                                  tAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGaa                                                                                                          >  2:628141/1‑141 (MQ=255)

                                   aaaCTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGaaa                                                                                                         >  1:744398/1‑141 (MQ=255)

                                          aaaaTGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGAttt                                                                                                  <  1:694710/141‑1 (MQ=255)

                                          aaaaTGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGAttt                                                                                                  <  1:895676/141‑1 (MQ=255)

                                           aaaTGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGAtttt                                                                                                 >  1:5966/1‑141 (MQ=255)

                                           aaaTGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGAtttt                                                                                                 >  2:714515/1‑141 (MQ=255)

                                           aaaTGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTGTTTTCATTTTTTTTTCTCCTTTTATTATTTTTTTTTCTGAAATAGAtttt                                                                                                 >  2:595254/1‑141 (MQ=255)

                                             aTGTCTTGCCATGTAATCCACTAATTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTATTTTTTCATTTTTATTAACCCCTTTATTATTTTTTATTATGAAATAGATTTTaa                                                                                               >  2:652318/1‑141 (MQ=255)

                                                    gCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTg                                                                                        <  2:190615/141‑1 (MQ=255)

                                                        tGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATATGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTCTTGATTATGAAATAAATTTTAAATAACTTtata                                                                                    >  2:508084/1‑141 (MQ=255)

                                                        tGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGtata                                                                                    >  1:231835/1‑141 (MQ=255)

                                                         gTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATaa                                                                                   <  1:833009/141‑1 (MQ=255)

                                                           aaTCCACTATTTGTTGTTTTTTATTAAACTGATTCTTTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATaaaa                                                                                 <  1:50726/141‑1 (MQ=255)

                                                           aaTCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATaaaa                                                                                 <  1:50605/141‑1 (MQ=255)

                                                           aaTCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATaaaa                                                                                 <  1:656044/141‑1 (MQ=255)

                                                             tCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAAt                                                                               >  2:317070/1‑141 (MQ=255)

                                                               cACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTAGAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTCTTAACCCTTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCa                                                                             <  1:478661/141‑1 (MQ=255)

                                                                aCTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCAc                                                                            <  1:504103/141‑1 (MQ=255)

                                                                     tttgtgtgTTGTATTAATCTGATTCTGTTGTATAACAGTGAAGATCGGAGTTAAACCGTTTTCTTTTTTCACTTTTATTACCCCCTTTATTACTTTTGCTTATGAGATAGATTTTAAATAACTGTATAAAAATCACTtata                                                                       <  2:435800/137‑1 (MQ=255)

                                                                      tgttgtTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTTATTTTTATTACTCCCTTTATTATTTTTGCTTATGAAATGGATTTTAAATAACTTTATAAAAATCACTTATaa                                                                      >  2:611240/1‑141 (MQ=255)

                                                                      tgttgtTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTTTAAAAATCACTTATaa                                                                      >  1:694111/1‑141 (MQ=255)

                                                                       gttgttTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATaaa                                                                     >  1:385464/1‑141 (MQ=255)

                                                                           ttttttATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAAtctc                                                                 >  1:170007/1‑141 (MQ=255)

                                                                             ttttATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCaa                                                               <  1:911923/141‑1 (MQ=255)

                                                                             ttttATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCaa                                                               <  1:629151/141‑1 (MQ=255)

                                                                               ttatcaAACTGATTCTGTTCTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGAATATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAAtt                                                             <  2:20075/141‑1 (MQ=255)

                                                                               taattaAACTGATTCTGTTGTCTAACAGTTAAGAAAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGCTTTTCACTACCCGAAGAAAAATCTCTTATAAATCTCAAtt                                                             >  2:410921/3‑141 (MQ=255)

                                                                                tattaAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAAttt                                                            >  1:707839/1‑141 (MQ=255)

                                                                                  ttaAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTTTTTTTTTTTACCCCCTTTATTATTTTTGTTTATGAAATAGATTTTAAATAACTGTATAAAAATCCCTTATAAATCTCAAtttta                                                          >  2:505003/1‑139 (MQ=255)

                                                                                    aaaCTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATTTCAATTTACaa                                                        >  1:833849/1‑141 (MQ=255)

                                                                                    aaaCTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACaa                                                        >  1:473463/1‑141 (MQ=255)

                                                                                      aCTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAaat                                                      <  1:582005/141‑1 (MQ=255)

                                                                                            tCTGTTGTATAACAGTTAAGATACGAACTACACTTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTGATAAATCTCAATTTACAAATAAtttt                                                >  2:378080/1‑141 (MQ=255)

                                                                                             cTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTCTTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTg                                               >  1:101898/1‑141 (MQ=255)

                                                                                             cTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTg                                               >  1:101569/1‑141 (MQ=255)

                                                                                                ttgtATAACAGTTAAGATAAGATTTAAACGTTTTTTTTTTTTTTTTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAATATTCACTTATAAATCTCAATTTACAATTAATTTTGaaa                                            >  2:779589/1‑141 (MQ=255)

                                                                                                ttgtATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTTTTTTTTTTTTCACCCTGTATTGTTTTTGATTATTAAATAGAGTTTAAATAATTGTATAAAGTTCACTTCTCAATCTCCATCTTCAAATAATTTTGaaa                                            >  2:609299/1‑141 (MQ=255)

                                                                                                ttgtATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAGATAATTTTGaaa                                            >  2:31813/1‑141 (MQ=255)

                                                                                                 tgtATAACAGTTAATATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAAt                                           <  2:857498/141‑1 (MQ=255)

                                                                                                 tgtATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAAt                                           <  2:843419/141‑1 (MQ=255)

                                                                                                 tgtATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAAt                                           <  1:747514/141‑1 (MQ=255)

                                                                                                  gtATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATa                                          >  1:318455/1‑141 (MQ=255)

                                                                                                   tataACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAg                                         <  1:6938/141‑1 (MQ=255)

                                                                                                    ataACAGTTAATATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGt                                        <  1:373419/141‑1 (MQ=255)

                                                                                                    ataACAGTTAAGCTTAGATTTAAACGTTTTTCTTTTTTTATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAAATGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGt                                        >  2:621991/1‑141 (MQ=255)

                                                                                                    ataACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGt                                        <  1:150996/141‑1 (MQ=255)

                                                                                                    ataACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGt                                        >  2:759880/1‑141 (MQ=255)

                                                                                                    ataACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGt                                        >  2:759865/1‑141 (MQ=255)

                                                                                                    ataACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGt                                        <  1:758663/141‑1 (MQ=255)

                                                                                                    ataACAGTTAAGATAAGATGTAAACGTTTTTCTTTTTTCATTTTTATTACCCTCTCTCGTACTTTTGATGATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGt                                        <  1:209630/141‑1 (MQ=255)

                                                                                                     taACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTg                                       <  1:173861/141‑1 (MQ=255)

                                                                                                      taCATTTAAGATAAGATTTTAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGATATAGCCTTGCTTTAACTGAATAAAGAGCTCTTAATAATCTCAATTTACACATAATTTTGAAATAGTgg                                      <  2:877815/140‑1 (MQ=255)

                                                                                                       aCAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGa                                     <  1:15463/141‑1 (MQ=255)

                                                                                                       aCAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGa                                     <  1:839287/141‑1 (MQ=255)

                                                                                                        cAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAGATAATTTTGAAATAGTGGAt                                    <  2:135880/141‑1 (MQ=255)

                                                                                                             aagataagatTTAAACGTTTTTCTTTTTTTTTTTTTTTTACCCCCTTTATTATTTTTGATTATTAAATAGATTTTAAATAACTGTATAAAATTCACTTTTAAATCTCAATTTACAAATAATTTTGAAATAGTGGTTACttt                               >  2:284105/1‑141 (MQ=255)

                                                                                                               gataagatTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTaa                             >  2:715133/1‑141 (MQ=255)

                                                                                                               gataagatTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTAAATTTACAAATAATTTTGAAATAGTGGATGCTTTaa                             >  2:405013/1‑141 (MQ=255)

                                                                                                                ataagatTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTAAt                            >  1:905043/1‑141 (MQ=255)

                                                                                                                       ttAAACTTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTAATTATAAGt                     <  2:205575/141‑1 (MQ=255)

                                                                                                                       ttAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTAATTATAAGt                     <  2:657529/141‑1 (MQ=255)

                                                                                                                          aaCGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTAGAAATAATTTTGAAATAGTGGATGCTTTAATTATAAGTAGa                  >  1:645017/1‑141 (MQ=255)

                                                                                                                           atgTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTCTGATTATAAGTAGat                 <  2:457972/139‑1 (MQ=255)

                                                                                                                             gTTTTTCTTTTTTTTTTTTTTTTACCCCCTTTATTATTTTTGATTATAAAATAGATTTTAAATAACTGTATAAAAATCCCTTATAAATCACAATTTACAAATATTTTTTTATTAGTTGATTCTTTAATTATAAGTTGattt               >  2:907572/1‑140 (MQ=255)

                                                                                                                             gTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTAATTATAAGTAGatta               <  2:370206/141‑1 (MQ=255)

                                                                                                                             gTTTTTCTTTTTTCATTGTCATTACCTCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTAATTATAAGTAGatta               <  1:700339/141‑1 (MQ=255)

                                                                                                                                 ttCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTAATTATAAGTAGATTAtttt           >  1:480357/1‑141 (MQ=255)

                                                                                                                                   cTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTAATTATAAGTAGATTATTTTAt         <  1:511687/141‑1 (MQ=255)

                                                                                                                                     tttttCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTAATTATAAGTAGATTATTTTATGc       <  1:152718/141‑1 (MQ=255)

                                                                                                                                      ttttTATGTTTATTACGCGCTTTATTATTGTTGATTATGAAAGAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTAATTATAAGTAGATTATTTTATGcc      <  2:234551/141‑1 (MQ=255)

                                                                                                                                       tttCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTAATTATAAGTAGATTATTTTATGCCt     >  1:529727/1‑141 (MQ=255)

                                                                                                                                       tttCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTAATTATAAGTAGATTATTTTATGCCt     >  1:519512/1‑141 (MQ=255)

                                                                                                                                        ttCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAAGAGTGGATGCTTTAATTATAAGTAGATTATTTTATGCCTa    <  1:333773/141‑1 (MQ=255)

                                                                                                                                          cATTTTTATTACCCCCTTTAGTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTAATTATAAGTAGATTATTTTATGCCTaaa  <  1:227329/141‑1 (MQ=255)

                                                                                                                                          cATTTTGATTACCCCCTTTATTATTTTTTTTTATTTTATAAACATAAAACAACTGTCTAAAAATCACTTATAAATCTCAATTTACAACTAATGTTGCAACAGTTGATTCTTTCTTTATTATTAGATTCTCTTATTCCtcca  >  2:502360/1‑138 (MQ=255)

TTGTAAGTCACGAGAAATAGTTGTCAAGCTATAGTAAACTCCAAAATGTCTTGCCATGTAATCCACTATTTGTTGTTTTTTATTAAACTGATTCTGTTGTATAACAGTTAAGATAAGATTTAAACGTTTTTCTTTTTTCATTTTTATTACCCCCTTTATTATTTTTGATTATGAAATAGATTTTAAATAACTGTATAAAAATCACTTATAAATCTCAATTTACAAATAATTTTGAAATAGTGGATGCTTTAATTATAAGTAGATTATTTTATGCCTAAA  >  CP000730/74869‑75147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`