BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP000730	2,359,473	G→T	7.0%	Q100K (CAA→AAA)	rpsM ←	ribosomal protein S13

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	2,359,473	0	G	T	7.0%	356.7 / 3.3	133	Q100K (CAA→AAA)	rpsM	ribosomal protein S13
Reads supporting (aligned to +/- strand): ref base G (76/45); new base T (8/2); total (85/48)
Fisher's exact test for biased strand distribution p-value = 3.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 135 total aligned reads displayed.

ATTCTTTTTCACTCTACGTTTACGAGATACTTGTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAACTTCACGGATGCGACCTA  >  CP000730/2359337‑2359613

atTCTTTTTCACTCTACGTTTACGAGATACTTGTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCa                                                                                                                                          <  2:497850/141‑1 (MQ=255)

      tttCTCTCTACGTTTACGAGATACTTTTTTACGTGCGATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACt                                                                                                                                    <  1:922689/141‑1 (MQ=255)

         cACTCTACGTTTACGAGATACTTGTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGt                                                                                                                                 <  1:125299/141‑1 (MQ=255)

          aCTCTACGTTTACGAGATACTTGTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTGTTAACTGGTCCTTTTCGAGTTCGCGGGTGGTTACACGTTATCTAACCACAAAccgata                                                                                                                                >  1:78292/1‑136 (MQ=255)

          aCTCTACGTTTACGAGATACTTGTTTACGTGCCATTTAAAATTTGCCTCCTTTAATTATTATTTTTTCTTGTTAGATACCGTTTTAACTGTTACTTTACGACTACGCGCGTTGTTTTTAGTTTTTTGACCACGAAATgtga                                                                                                                                >  1:569332/1‑138 (MQ=255)

            tctACGTTTACGAGATACTTGTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTTGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTtaa                                                                                                                              >  2:1001976/1‑141 (MQ=255)

             ctACGTTTACGAGATACTTGTTTACCTGCCATTTATTATTTGCCTTCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAAc                                                                                                                             <  1:1031064/141‑1 (MQ=255)

              tACGTTTACGAGATACTTGTTTACGTGCCATTTAAAATTTGACTCCTTTATCTTTTATGTTTTCTTGTTAGCTACCGTTTTAACATCTCTTCCACTATTACGCGCGTTGTTTTTCGTTTTTTTGCCACGAACTGGTAAAcc                                                                                                                            >  2:1062727/1‑141 (MQ=255)

                cGTTTACGAGATACTTGTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAAATGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCac                                                                                                                          <  1:480296/141‑1 (MQ=255)

                         gaTACTTGTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTGCCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGag                                                                                                                 >  1:423920/1‑140 (MQ=255)

                         gaTACTTGTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCCCGAACTGGTAAACCACGCCGGTGAc                                                                                                                 >  1:477885/1‑141 (MQ=255)

                         gaTACTTGTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCCCGAACTGGTAAACCACGACGGTGAc                                                                                                                 >  2:241083/1‑141 (MQ=255)

                         gaTACTTGTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTgtc                                                                                                                 >  1:967116/1‑139 (MQ=255)

                         gaTACTTGTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTgcg                                                                                                                 >  1:313755/1‑139 (MQ=255)

                         gaTACTTGTTTACGTGCCATTAAAAAATTGGCTCCTTTACCTATTATTTTTTCTTTTTAGATACCGTTTTAACTGGTCCTTTACTAATACGCGCGTTGATTCTCGTTTTTTTACCACAATATGGTACACCACGATGGttcc                                                                                                                 >  2:319956/1‑138 (MQ=255)

                         gaTAATTGTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGCATACTCGCGTTGTTTTTCGTTATTTGACCACGAACTGGTAAACCACGACGGTGAc                                                                                                                 >  1:752478/1‑141 (MQ=255)

                                gTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTTTTTTCTACCGTTTTAACTGGTCCTTTACGAGGACGCGCGTTGTTTTTCGTTTTTTGCCTACGAACTGGTAAACCACGACGGTGGCGGATAcc                                                                                                          >  2:911534/1‑141 (MQ=255)

                                gTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTTACCACGATCTGGTAAACCACGACGGTGAAGGTTAcc                                                                                                          >  2:329752/1‑141 (MQ=255)

                                gTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATAcc                                                                                                          >  2:413283/1‑141 (MQ=255)

                                gTTTACGTGCCATTGAAAATTTGCGTCCATTACTTATTATTTTTTCTTGTTGGCTACCGTTTTAGGTGGTCCGTTAGGAGTACGCGAGTTGTTTTTCGTTTTTTGACCACGAACTGGTTGACCTCGACGGTGGAGGATAcc                                                                                                          >  2:836984/1‑141 (MQ=255)

                                     cGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGt                                                                                                     >  1:39248/1‑141 (MQ=255)

                                      gTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTa                                                                                                    >  2:963090/1‑141 (MQ=255)

                                      gTGCCATTTAAAATTTGCCTCCTTTACCTATTATTGTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGtc                                                                                                    >  2:950212/1‑140 (MQ=255)

                                       tGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTat                                                                                                   >  2:561202/1‑141 (MQ=255)

                                         ccATTTAAAATTTGCCTCCTTTACCTATTATTTTTTTTTTATTGTTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTAGTTTTTTGTTTACGTACTTGTAAGCCTAGACGGTGAAGGTTACCACGGTacgt                                                                                                 >  2:718438/1‑138 (MQ=255)

                                         ccATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTatga                                                                                                 >  2:819328/1‑141 (MQ=255)

                                          cATTTTAAATTTGCCTCCTTTACCTTTTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTatgat                                                                                                <  2:1031391/141‑1 (MQ=255)

                                           aTTTACAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGACTCATACGATTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTatgatg                                                                                               <  1:255043/141‑1 (MQ=255)

                                           aTTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTatgatg                                                                                               >  1:139799/1‑141 (MQ=255)

                                            tttAAATTTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTAtgatga                                                                                              <  2:713369/141‑1 (MQ=255)

                                            tttAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTAtgatga                                                                                              <  2:410923/141‑1 (MQ=255)

                                            tttAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTAtgatga                                                                                              <  2:509240/141‑1 (MQ=255)

                                             ttAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTTTCTGGTCCTTTACGAGTACGCGTGTTGTTTTTCGTTTTTTGATCTCGAACTGGTAATCTATGACGGTGGTGGATATCGCGGTttgttgga                                                                                             >  2:395402/1‑139 (MQ=255)

                                              tAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGAGCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTatgat                                                                                                >  2:285091/1‑137 (MQ=255)

                                              tAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGTTAAACCCCGACGGTGACGGATACCACGGTATGATaaaa                                                                                            >  2:410339/1‑141 (MQ=255)

                                                 aaTTTGCCTCCTTTACCTATTCTTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAAttt                                                                                         <  2:498481/141‑1 (MQ=255)

                                                   tttGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGTTAAACCACGACGGTGACGGCTACCCCGGTatgcttcaatatcc                                                                                       >  2:371021/1‑130 (MQ=255)

                                                    ttgacccctTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCa                                                                                      <  2:495029/135‑1 (MQ=255)

                                                     tGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCAt                                                                                     >  1:834725/1‑141 (MQ=255)

                                                      gcttcctTACCCTATTATTCTTTCTTGGTAGCTACCGTTTTAACTAGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTAGACCACGAACTGGTACACCACGACGGTGACGGATACCACGGTATGATGAAATTGCCAtt                                                                                    <  2:378994/138‑1 (MQ=255)

                                                             ttacgcattattTTTTCTTGTTAGCTACCGTCTTAACGGGTCCTTTACGAGTACGCGCTTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGtt                                                                             <  2:51612/135‑1 (MQ=255)

                                                                ccTATTCTTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAACTTTCCATTAACCGTTTGa                                                                          >  2:676218/1‑141 (MQ=255)

                                                                ccTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGCATACCACGGTATGATGAAATTTCCATTAAACGTTTGa                                                                          >  2:943506/1‑141 (MQ=255)

                                                                  tattatTTTTTCTTGTTAGCTACCGTTTTAGCTGGTGCTTTACGAGTCCGCGCATTGTTTTTTGTTTTTTGACCACGAACTGGTAAACCACGCGCGCGACGGATGCCACGGTATGATGAAAATTCCATTAAACGTTTgtat                                                                        >  2:1005819/1‑138 (MQ=255)

                                                                  tattatTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGata                                                                        >  1:341291/1‑141 (MQ=255)

                                                                  tattatTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGata                                                                        <  1:1057062/141‑1 (MQ=255)

                                                                    ttattGTTTCATGTGAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTACCATTAAACGTTTGATAtt                                                                      >  2:1098527/1‑141 (MQ=255)

                                                                     tttcttttCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGGTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATAttt                                                                     <  2:2541/137‑1 (MQ=255)

                                                                        tttttCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTCCGGACGTTATTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGGATGATGAAATTTCCATTAAACGTTTGGTATTTAag                                                                  >  1:582813/1‑141 (MQ=255)

                                                                            tCTTGTTAGCTACCGTTTTACCTGGTCCTTTACGAGGACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACTACGGTGACGGATACCACGGTATGATGAAATTTCCATTTAACGTTTGATATTTAagttag                                                              <  1:233166/141‑1 (MQ=255)

                                                                            tCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACTACTGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAagttag                                                              <  1:423907/141‑1 (MQ=255)

                                                                             cTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGCGACGGATACCACGGTATGATGAAATTTTCATTAAACGTTTTATCTTTAagttagt                                                             >  1:441072/1‑141 (MQ=255)

                                                                              ttGTTAGCTACAGTTTTAACTGGTCCTTTACGAGTACGCGCGTGGTTTTTCGTTTTTTGACCACGAACTGTTACACCACGACGCTGACTGATACCACGTTATGATGAAATTTCCCTTAAACGTTTGTTATTTAatttagtt                                                            >  2:263175/1‑141 (MQ=255)

                                                                                gTTAGCTACCGTTTTGACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGATTc                                                          >  1:821159/1‑141 (MQ=255)

                                                                                gTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGtttt                                                          >  2:1006543/1‑140 (MQ=255)

                                                                                     cTACCGTTTTATCTGGTCCTTTACGAGTACGCGTGTTTTTTTTCTTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGACATTTAAGTTAGTTTCacgac                                                     <  2:613355/141‑1 (MQ=255)

                                                                                         cGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTaa                                                 >  2:590918/1‑141 (MQ=255)

                                                                                            tttAACTGTTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTc                                              <  1:763685/141‑1 (MQ=255)

                                                                                            tttAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTc                                              >  2:532732/1‑141 (MQ=255)

                                                                                             ttAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCa                                             <  1:112094/141‑1 (MQ=255)

                                                                                             ttAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCa                                             >  1:1049353/1‑141 (MQ=255)

                                                                                             ttAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCa                                             >  1:303139/1‑141 (MQ=255)

                                                                                             ttAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCAAGAACTGGTAAACCACGACGGTGACGGATACAACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTcc                                             >  2:580450/1‑140 (MQ=255)

                                                                                              tAACTGGTCCTTTACGTGTACGCGCGTTGTTTTTCGTTTTTTGACCTCGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCAc                                            <  1:85616/141‑1 (MQ=255)

                                                                                                 cTGGTCCTTTACGAGTACGCGCGTTGTTTTTTTTTTTTTTTTCACGAAATGGTAACCCACGACGGTGACGGATGGTACGGGAGGGTGAAATTTTCATTTTACGTTTTATATTTTTTTTAGTTTCCCGTCGTAAGTCaaatt                                         >  2:1105756/1‑137 (MQ=255)

                                                                                                 cTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACTAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCtt                                         >  2:901467/1‑141 (MQ=255)

                                                                                                 cTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACttt                                         >  2:106154/1‑141 (MQ=255)

                                                                                                 cTGGTCCTTTACGAGGACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCAGGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGGTATTTAAGTTAGTTTCACGAGGTAAGTCACCtt                                         >  2:617805/1‑141 (MQ=255)

                                                                                                        tttACGAGTACCCGCGTTGGTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAACTCACCTTCGACttt                                  <  2:752478/141‑1 (MQ=255)

                                                                                                         ttACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTTAACGTTTGATATTTAATTTAGTTGCATGACGTAAGTTACGTTCGTCtttt                                 >  1:96982/1‑140 (MQ=255)

                                                                                                          tACGAGTACGCGCGTTGTTTTTCGTTTTTTTTCTTTTTATTGATAAACCACCACGGTGACGGATAGCACGGTATGATGAAATTTCCATTAAACGTTTGATCTTTAAGTTAGTTCCACTACGTAAGTCACCTTCGACTTtat                                >  2:745974/1‑141 (MQ=255)

                                                                                                          tACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTtat                                <  2:139799/141‑1 (MQ=255)

                                                                                                            cGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACAACGTCGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGAAAGTCACCTTCGACTTTATaa                              >  2:950885/1‑141 (MQ=255)

                                                                                                             gAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAAc                             <  2:39248/141‑1 (MQ=255)

                                                                                                             gAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACAACGACGGTGACGGATACTTCGGTACGATGAAATTTCCATTAAACGTTTGATATTTAAGTTTGTGTTACGACGTACGTCACCTTTGCCTGTATAAc                             >  2:1091423/1‑141 (MQ=255)

                                                                                                               gTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCg                           >  1:756720/1‑141 (MQ=255)

                                                                                                                 aCGCGCGTTGTTTTTTTTTTTTTTTCCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCTTc                         >  2:12170/1‑141 (MQ=255)

                                                                                                                   gcgcgTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTcca                       >  1:719741/1‑139 (MQ=255)

                                                                                                                   gcgcgTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTa                       >  1:1002493/1‑141 (MQ=255)

                                                                                                                    cgcgTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTAc                      >  2:198397/1‑141 (MQ=255)

                                                                                                                    cgcgTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACAGTGACGAATACCACGGTATGATGAAATTTACATTAAACATTTGATATTTAATTTAGTTTGACGACGTAAGTAACTTTCGACTTTCAAAACGTCTaa                      >  2:776157/1‑140 (MQ=255)

                                                                                                                     gcgTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGCCTTTATAACCGTCTACa                     >  1:676595/1‑141 (MQ=255)

                                                                                                                     gcgTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTCTGATCATTAAGATAATTTCACGAAGTAAGTCACCTTCGACTTTATAACCGTCTACa                     >  1:799721/1‑141 (MQ=255)

                                                                                                                       gttgttTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAAc                   <  1:963090/141‑1 (MQ=255)

                                                                                                                        ttgttTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATCACCGTCTACAACt                  >  1:365006/1‑141 (MQ=255)

                                                                                                                        ttgttTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGCTGCACGACGTAGGTCACCTTCGACTTTATAACCGTCGACAACt                  >  1:204173/1‑141 (MQ=255)

                                                                                                                         tgttTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATTACCGTCTACAACtt                 <  2:750768/141‑1 (MQ=255)

                                                                                                                         tggttttCGTTTTTTTACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAACtt                 <  2:16232/138‑1 (MQ=255)

                                                                                                                           tttttCGTTTTTTGACCACGAACTGGTAAACCACGACGTTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAACTTCa               <  1:329752/141‑1 (MQ=255)

                                                                                                                           tttttCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTACACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAACTTCa               <  1:1062727/141‑1 (MQ=255)

                                                                                                                           tttttCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAACTTCa               <  1:824428/141‑1 (MQ=255)

                                                                                                                           tttttCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAACTTCa               <  1:413283/141‑1 (MQ=255)

                                                                                                                             tttCGTTTTTTTGCCGCGTACTGGTAAACCACGACGGTTACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAACTTCACg             <  2:96982/141‑1 (MQ=255)

                                                                                                                             tttCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAACTTCACg             <  2:796445/141‑1 (MQ=255)

                                                                                                                              ttCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAACTTCACgg            >  1:352197/1‑141 (MQ=255)

                                                                                                                                  ttttttGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAACTTCACGGATGc        <  1:911534/141‑1 (MQ=255)

                                                                                                                                  ttttctGACCATGAACTGGTAAACCACGACTGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTGGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAACTTCACGGATGc        <  1:836984/141‑1 (MQ=255)

                                                                                                                                      ttGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAACTTCACGGATGCGAcc    <  1:1002687/141‑1 (MQ=255)

                                                                                                                                        gACCACGAACTGGTCAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTCGTTACATCGTGTAGGACACCTTCGACTTTATAACCGTCTACAACTTCACGGATGCGACCTa  >  1:577839/1‑141 (MQ=255)

                                                                                                                                        gACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTACATTAACCGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAACTTCACGAATGCAACCTa  >  1:479766/1‑141 (MQ=255)

ATTCTTTTTCACTCTACGTTTACGAGATACTTGTTTACGTGCCATTTAAAATTTGCCTCCTTTACCTATTATTTTTTCTTGTTAGCTACCGTTTTAACTGGTCCTTTACGAGTACGCGCGTTGTTTTTCGTTTTTTGACCACGAACTGGTAAACCACGACGGTGACGGATACCACGGTATGATGAAATTTCCATTAAACGTTTGATATTTAAGTTAGTTTCACGACGTAAGTCACCTTCGACTTTATAACCGTCTACAACTTCACGGATGCGACCTA  >  CP000730/2359337‑2359613

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`