BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP000730	428,178	A→T	3.6%	V371V (GTT→GTA)	ahpF ←	peroxiredoxin subunit F

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	428,178	0	A	T	3.6%	369.3 / 2.4	133	V371V (GTT→GTA)	ahpF	peroxiredoxin subunit F
Reads supporting (aligned to +/- strand): ref base A (69/54); new base T (2/4); total (74/59)
Fisher's exact test for biased strand distribution p-value = 4.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.20e-01

Only 100 of 133 total aligned reads displayed.

ACGTATACCTGTAACATGGTCTTCTCCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAACACCTTTATTAATCAATTGCT  >  CP000730/428040‑428317

ccGTATACCTGTAACTTGGTCTTCTCCGACAACTTCAGTAGTTTTGGCATGTGTTTTGATATCAAAATTTGGTAAAGTACGTAAACGTTCTTTTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAAc                                                                                                                                            <  1:258981/140‑1 (MQ=255)

aCGTATACCTGTAACATGGTCTTCTCCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAAc                                                                                                                                            >  1:25267/1‑141 (MQ=255)

aCGTATACCTGTAACATGGTCTTCTCCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGATTTTAATTCGCTAGCGAATTCGAATAATGTAAc                                                                                                                                            >  1:751453/1‑141 (MQ=255)

aCGGATCCCTGTAACATGGTCTTCTCCGACAACGTCAGTAGTTTTGGCATTTGTTTTGGTATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAAc                                                                                                                                            <  1:261457/141‑1 (MQ=255)

   tataCCTGTAATATGGTCTTCTCCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTACCGAATTCGAATAATGTCACATg                                                                                                                                         >  2:956262/1‑141 (MQ=255)

   tataCCTGTAACATGGTCTTCTCCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGCTAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTCGCGAATTCGCATAATGTAACATg                                                                                                                                         >  2:90437/1‑141 (MQ=255)

     taCCTGTAACATGGTCTTCTCCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATCATGTTACAttat                                                                                                                                       <  1:502248/141‑4 (MQ=255)

     taCCTGTAACATGGTCTTCTCCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATCATGTTACAttat                                                                                                                                       <  1:341795/141‑4 (MQ=255)

               aTGGTCTTCTCCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAAGATGAT‑TAACGATAcc                                                                                                                            <  1:822065/141‑1 (MQ=255)

               aTGGTCTTCTCCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATAcc                                                                                                                            <  1:272748/141‑1 (MQ=255)

                 ggTCTTCTCCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAg                                                                                                                          >  1:641476/1‑141 (MQ=255)

                 ggTCTTCTCCGACAACTTCAGGAGTTTAGGACTTTGTTTTGATATCAACATTTGATAAAGACCGTAAACGATCTTGTCACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAg                                                                                                                          >  2:730906/1‑141 (MQ=255)

                   tcttctCCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCa                                                                                                                        <  1:778681/141‑1 (MQ=255)

                      tctcCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAgg                                                                                                                     >  2:654109/1‑141 (MQ=255)

                       ctcCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCCACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTTACATGAT‑TAACGATACCCGCAAGGt                                                                                                                    >  2:270563/1‑141 (MQ=255)

                       ctcCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGt                                                                                                                    >  1:818542/1‑141 (MQ=255)

                       ctcCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGAGCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATCCCAGctggtt                                                                                                                    >  2:885892/1‑136 (MQ=255)

                        tcCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTc                                                                                                                   <  2:1100508/141‑1 (MQ=255)

                        tcCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTc                                                                                                                   <  1:654109/141‑1 (MQ=255)

                        tcCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTCATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTc                                                                                                                   <  1:595448/141‑1 (MQ=255)

                          cGACAACTTCAGTAGTTTTGGTATTTGTTGTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCaattgacc                                                                                                                 <  1:1030305/141‑7 (MQ=255)

                           gACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAAt                                                                                                                <  2:497456/141‑1 (MQ=255)

                           gACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAAt                                                                                                                <  1:998088/141‑1 (MQ=255)

                                 ttCAGTAGTTTTGGCTTTTGTTTTGATATCAACATTTGATAAAGATCGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGGGAATTCGAATAATGTAACATGAT‑TAATGTTCCCGGGAGGGTCAAttgttgg                                                                                                          >  2:23548/1‑140 (MQ=255)

                                   cAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCtt                                                                                                        >  1:99018/1‑141 (MQ=255)

                                    agtagtTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTc                                                                                                       <  2:344324/141‑1 (MQ=255)

                                    agtagtTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTc                                                                                                       <  2:798154/141‑1 (MQ=255)

                                    agtagtTTTGGCATTTGTTTTGATATCAACAGTTGAGAAAGAACGTCAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTc                                                                                                       <  2:263093/141‑1 (MQ=255)

                                    agtagtGTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTc                                                                                                       <  2:78406/141‑1 (MQ=255)

                                       agtTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCCATTGCTGCTTCAAc                                                                                                    >  1:498219/1‑141 (MQ=255)

                                       agtTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCCGCTTCAAc                                                                                                    >  1:1084293/1‑141 (MQ=255)

                                       agtTATGGCATATGTTCTGATATCAACATTTAATAAAGAACGTAAACGAACTAGTAACACCTT‑GTCTGCTTTTAAATCGCTAGCGAATTCGAATAAGGTAACATGAC‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAAc                                                                                                    >  2:937921/1‑141 (MQ=255)

                                          tttGGCATTTGTTTTGATATCAACATTTGATAAAGAGCGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTATCGAATTCGAATAATGTAACATGAT‑TAACGATACCGGCAGGGTCAATGTCTGCGTAAGcccc                                                                                                 >  2:569093/1‑141 (MQ=255)

                                          tttGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAAcccc                                                                                                 >  1:291897/1‑141 (MQ=255)

                                          tttGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAAcccc                                                                                                 >  2:412323/1‑141 (MQ=255)

                                                 tttGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATATTGTTA‑AGGATGTAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTa                                                                                          >  1:1083068/1‑141 (MQ=255)

                                                 tttGTTTTGATATCAACATTTGATAAAGAAAGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGATa                                                                                          >  2:952781/1‑141 (MQ=255)

                                                  ttGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTCACATGCT‑TAACGATACCAGCAAGGTCAATTGCTGCTACAACCCCAGAGTTAc                                                                                         >  2:835942/1‑141 (MQ=255)

                                                   tGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCTAATTCGACTAATGTAACATGAT‑TAACGATACCCGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTAcc                                                                                        <  1:1038229/141‑1 (MQ=255)

                                                     ttttGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGc                                                                                      >  1:316478/1‑141 (MQ=255)

                                                       ttcgtatCAACTTTTTATAAAGAACGTAAACGGTCTTGTCGCGCATTAATCT‑CTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCa                                                                                    <  1:910369/137‑1 (MQ=255)

                                                       ttGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCa                                                                                    <  1:660926/141‑1 (MQ=255)

                                                            atCCACATTTGGTAACGACCGTAAACGATCTTGTATCACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATCAGGTAGCATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGAt                                                                               <  1:346690/141‑1 (MQ=255)

                                                             tCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTAGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCATCCGCCGTGTTGACGCCCCCGaca                                                                              >  1:705196/1‑139 (MQ=255)

                                                                 tctttGATAAAGAACGTACACGACCTTGTAACATTTT‑GTCTGCGTTTAACCCTCTTGCTAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTg                                                                          <  1:974495/139‑1 (MQ=255)

                                                                    ttGATAAAGAACGTAAACGATCTTGTAACCCGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGAtttgtgcta                                                                       <  2:403226/141‑9 (MQ=255)

                                                                      gATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACg                                                                     >  1:399858/1‑141 (MQ=255)

                                                                       aTAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGt                                                                    >  1:1012615/1‑141 (MQ=255)

                                                                           aGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCttt                                                                <  2:849042/141‑1 (MQ=255)

                                                                            gAACGTAAACGATCTTGTAAGACGTT‑GTCGGCTTTTAATTCGCTAGCGAATTCGAGTAATTTAACATGAT‑TAACGATACCATCCAGGTCTATTGCTACTTCAACCACAGAGTTTTGACCACTGATCACGGGTACGCCtttt                                                               >  2:472968/1‑140 (MQ=255)

                                                                            gAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGGTAACTGCTACGCCtttt                                                               >  2:244830/1‑140 (MQ=255)

                                                                             aaCGTAAACGATCTTGTAACACGCT‑GTCTGCTTTTAATTCGCCAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTTCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTAt                                                              <  2:299262/141‑1 (MQ=255)

                                                                                  aaaCGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGACTTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCa                                                         <  1:989577/141‑1 (MQ=255)

                                                                                  aaaCGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCa                                                         <  2:356306/141‑1 (MQ=255)

                                                                                   aaCGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCaa                                                        >  2:579322/1‑141 (MQ=255)

                                                                                   aaCGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCaa                                                        >  1:768885/1‑141 (MQ=255)

                                                                                   aaCGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGCCTCTATTTTCaa                                                        >  2:741680/1‑141 (MQ=255)

                                                                                   aaCGATCTTGTAACACGTT‑GTCTGCTTTTAATTAGCTAGCGTATTCGGATAATGTAACATGAT‑TAACGATGCCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCaa                                                        >  1:650492/1‑141 (MQ=255)

                                                                                   aaCGATCTTGTAACACGTT‑GCCTGCTTTTAATTCGCTAGCGAATACGAATAACGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACTGATAACTGCTGCGTCTTTATTTTCaa                                                        >  1:671947/1‑141 (MQ=255)

                                                                                     cGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCCCCACCGATAACTGCTACGTCTTTATTTTCTAAt                                                      >  2:440469/1‑141 (MQ=255)

                                                                                     cGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTCCTGCTTCAACCCAAAAGTTACCGCCACCGAAAACTGCTACGCCTATATTTTCAAAt                                                      >  2:19320/1‑141 (MQ=255)

                                                                                      gATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGCT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGACACGTATTTCTTTTCAAATa                                                     >  2:141652/1‑141 (MQ=255)

                                                                                           tGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGt                                                >  1:225771/1‑141 (MQ=255)

                                                                                           tGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGCCTTTATTTTCAAATAGAGGt                                                >  1:225599/1‑141 (MQ=255)

                                                                                            gTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTc                                               >  1:110969/1‑141 (MQ=255)

                                                                                               acacGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAACAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGt                                            >  2:399248/1‑141 (MQ=255)

                                                                                                     t‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCCGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGGCCGTCACAGt                                      >  2:778210/1‑141 (MQ=255)

                                                                                                     t‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAgg                                      >  2:914526/1‑140 (MQ=255)

                                                                                                     t‑GTCTGCTTCTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGt                                      >  1:811303/1‑141 (MQ=255)

                                                                                                       gTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTg                                     >  1:109627/1‑141 (MQ=255)

                                                                                                       gTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGCAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTg                                     >  1:292752/1‑141 (MQ=255)

                                                                                                          tGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACCTGAT‑TAACGCTACCACCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCCACGTCTTTATTTTCAGATAGAGGTCCGTCACAGTGAgg                                  >  1:428146/1‑141 (MQ=255)

                                                                                                                tAATTCGCTTGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGaa                            <  2:902409/141‑1 (MQ=255)

                                                                                                                tAATTCGCTAGGGAATGCGAATAATGTACCATGAT‑CAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGaa                            <  1:372470/141‑1 (MQ=255)

                                                                                                                tAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATCACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGaa                            <  1:731883/141‑1 (MQ=255)

                                                                                                                  aTTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATg                          <  1:761694/141‑1 (MQ=255)

                                                                                                                  aTTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATg                          >  2:1029811/1‑141 (MQ=255)

                                                                                                                   ttCGCTAGCCAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGc                         <  1:168647/141‑1 (MQ=255)

                                                                                                                    tCGTTAGGGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCa                        <  2:268130/141‑1 (MQ=255)

                                                                                                                     cGCTAGCGAATTCGAATAATGTTACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCaa                       <  1:588886/141‑1 (MQ=255)

                                                                                                                     cGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCaa                       <  1:371896/141‑1 (MQ=255)

                                                                                                                     cGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTAAGGGCAGAATGCaa                       <  2:751453/141‑1 (MQ=255)

                                                                                                                       cTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAaca                     <  2:185422/141‑1 (MQ=255)

                                                                                                                       cTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAaca                     >  1:495842/1‑141 (MQ=255)

                                                                                                                        tAGCGAATTCGAATAATGTAACATGAT‑TAACGCTACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGACTGCAacac                    >  1:77917/1‑141 (MQ=255)

                                                                                                                        tAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAacac                    >  1:188827/1‑141 (MQ=255)

                                                                                                                          gCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGATTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTGCAAATAGAGGTCCGTCACTGTGAGGGCAGAAAGCACCAACt                  >  2:644283/1‑141 (MQ=255)

                                                                                                                           cGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAACACCtt                 >  1:410513/1‑141 (MQ=255)

                                                                                                                            gAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAACACCttt                <  1:448192/141‑1 (MQ=255)

                                                                                                                              atccGAATAATGTAACTGGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAACACCTttat              <  2:1084293/138‑1 (MQ=255)

                                                                                                                              aTTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGACTTTATTTTCAAATAGAGGTCCGTCACAGAGAGGGCAGAATGCAACACCTttat              >  2:650349/1‑141 (MQ=255)

                                                                                                                                 cGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAACACCTTTATTaa           <  2:182488/141‑1 (MQ=255)

                                                                                                                                   aataatGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAACACCTTTATTAATc         >  1:570107/1‑141 (MQ=255)

                                                                                                                                      aatGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAACACCTTTATTAATCAAt      >  1:918104/1‑141 (MQ=255)

                                                                                                                                      aatGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAACACCTTTATTAATCAAt      >  1:357946/1‑141 (MQ=255)

                                                                                                                                      aatGTAACATGAT‑TAACGATACCAGCAAGGTCAAGTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAACACCTTTATTAATCAAt      <  2:212163/141‑1 (MQ=255)

                                                                                                                                      aatGTAACATGAT‑TAACGATACCAGCAAGCTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAACACCTTTATTAATCAAt      <  1:1010518/141‑1 (MQ=255)

                                                                                                                                      aatGGAACATGAT‑TAACGATACCAGCAATGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAACACCTTTATTAATCAAt      <  1:9975/141‑1 (MQ=255)

                                                                                                                                         gTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAACACCTTTATTAATCAATTGc   <  2:1012615/141‑1 (MQ=255)

                                                                                                                                          tAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCATAGTGAGGGCAGAATGCAACACCTTTATTAATCAATTGct  <  2:551095/141‑1 (MQ=255)

ACGTATACCTGTAACATGGTCTTCTCCGACAACTTCAGTAGTTTTGGCATTTGTTTTGATATCAACATTTGATAAAGAACGTAAACGATCTTGTAACACGTT‑GTCTGCTTTTAATTCGCTAGCGAATTCGAATAATGTAACATGAT‑TAACGATACCAGCAAGGTCAATTGCTGCTTCAACCCCAGAGTTACCGCCACCGATAACTGCTACGTCTTTATTTTCAAATAGAGGTCCGTCACAGTGAGGGCAGAATGCAACACCTTTATTAATCAATTGCT  >  CP000730/428040‑428317

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`