Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 1,416,458 A→T 100% I216N (ATT→AAT)  USA300HOU_1314 ← oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007301,416,4580AT100.0% 231.7 / NA 75I216N (ATT→AAT) USA300HOU_1314oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (36/39);  total (36/39)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

ACTCAATCATAGTAATCCCTCTTTAATTGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAAATGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCAAAGCATCCAATGATGCAACTGG  >  CP000730/1416326‑1416591
                                                                                                                                    |                                                                                                                                      
aCTCAATCATAGTAATCCCTCTTTAATTGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTAGCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGa                                                                                                                                <  2:591160/141‑1 (MQ=255)
   cAATCATAGTAATCCCTCTTTAATTGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACaa                                                                                                                             >  2:6408/1‑141 (MQ=255)
   cAATCATAGTAATCCCTCTTTAATTGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACaa                                                                                                                             >  1:1083987/1‑141 (MQ=255)
   cAATCATAGTAATCCCTCTTTAATTGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACaa                                                                                                                             >  1:426686/1‑141 (MQ=255)
    aaTCATAGTAATCCCTCTTTAATTGTGTTCTCTATTTTATTTTACTTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAat                                                                                                                            >  1:1093339/1‑141 (MQ=255)
          aGTAATCCCTCTTTAATTGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATACTTGTACTGACAATATTTCa                                                                                                                      >  2:964510/1‑141 (MQ=255)
               tCCCTCTTTAATTGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACa                                                                                                                 >  1:980679/1‑141 (MQ=255)
               tCCCTCTTTAATTGTGTTCTATATTCAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACa                                                                                                                 <  1:314929/141‑1 (MQ=255)
                   tctTTAATTGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGAc                                                                                                            >  2:949599/1‑141 (MQ=255)
                    ctTTAATTGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAAAATAATTGTACTGACAATATTTAAATACATGACt                                                                                                           >  2:389694/1‑141 (MQ=255)
                    ctTTAATTGTGTTCTATATTAAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACATTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGAcg                                                                                                           >  1:776173/1‑140 (MQ=255)
                        taTTGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAg                                                                                                       <  2:598143/140‑1 (MQ=255)
                        aaTTGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAGTTGTACTGACAATATTTCAATACATGACTTAAg                                                                                                       >  2:615466/1‑141 (MQ=255)
                        aaTTGTGTTCTATATTTAATTAGACGTTCAGTATACGCATGCAAATGCTTATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAg                                                                                                       <  1:853248/141‑1 (MQ=255)
                         aTTGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGt                                                                                                      <  2:766038/141‑1 (MQ=255)
                          ttGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGtt                                                                                                     >  1:117775/1‑141 (MQ=255)
                          ttGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTGAAAACATAATTGTACTGAGAATATCTCAATACATGACTTAAGtt                                                                                                     <  1:606251/141‑1 (MQ=255)
                            gtgtTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTAt                                                                                                   <  1:416862/141‑1 (MQ=255)
                            gtgtTCTATATTTAATTAGACGTTCAGCATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTAt                                                                                                   <  1:161195/141‑1 (MQ=255)
                              tttCTATTTTTAATTAGTCGTTCAGAATCCCGATGCTGATCCTCCTACTTGCATTGATGAAAAGTTCCACGTTCAATTAGTTGACCTTCTTTTAAAACGTAATGGTTCTGACAATATTTCAATACATGACTTAAGTTAtgt                                                                                                 <  2:640791/140‑1 (MQ=255)
                                        tAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCACTCATAGACTTAAGTTATGTGTGAtaataa                                                                                       >  2:1110250/1‑141 (MQ=255)
                                         aaTTAGACGTTCAGTATACGGATGCAAATGATCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATaataaa                                                                                      <  2:774770/141‑1 (MQ=255)
                                            tAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACAATTAGTACTTATTTTACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAataaataa                                                                                   <  1:254486/141‑1 (MQ=255)
                                                    cAGTATACGGCTGCGAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGAc                                                                           >  2:750007/1‑141 (MQ=255)
                                                    cAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGAc                                                                           >  1:407791/1‑141 (MQ=255)
                                                    cAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGAc                                                                           >  1:1051445/1‑141 (MQ=255)
                                                     aGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGAcc                                                                          <  2:104678/141‑1 (MQ=255)
                                                     aGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACAGGACTTAAGTTATGTGTGATAATAAATAATGTTTGAcc                                                                          <  1:759917/141‑1 (MQ=255)
                                                      gTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCa                                                                         >  2:613330/1‑141 (MQ=255)
                                                      gTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCa                                                                         >  2:923324/1‑141 (MQ=255)
                                                       tataCGTGTGCAAATGCTCATACTTGAAATGATTAATAGTACCTCGTTCAATGGTTTGACCTTCTTTTAAAACATAATTGGACTGACAATATGTGGGTGGTGGGGGGGAGTTATGTGTGATAATAAATAATGTTTGACCAt                                                                        <  2:1009943/141‑1 (MQ=255)
                                                        ataCGGGTGAAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATg                                                                       <  2:896691/141‑1 (MQ=255)
                                                        ataCGGATGCAAATGCTCACACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATTACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATg                                                                       <  2:896097/141‑1 (MQ=255)
                                                           tggATGTAAATGCTCATGTTTGAAATGATTAATATTACGTCGTTCCATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATAGTTCAATACATGACTTAAGTTATGTGTTATAATAAATAATGTTTGACCATGTTc                                                                    <  1:51820/140‑1 (MQ=255)
                                                                 ccaaTGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATAc                                                              <  1:95435/139‑1 (MQ=255)
                                                                  aaaTGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGGCCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACa                                                             <  1:49267/141‑1 (MQ=255)
                                                                  aaaTGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAGTACa                                                             >  2:916754/1‑141 (MQ=255)
                                                                   aaTGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTCATACaa                                                            >  2:398968/1‑141 (MQ=255)
                                                                    aTGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAat                                                           >  1:675097/1‑141 (MQ=255)
                                                                              ttcaattggttAATATTACCTCTTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTTTAATACAATATGCTGtaat                                                 <  2:906401/132‑1 (MQ=255)
                                                                               tGAAACGTTTGATCTTACCTCGTTTACTTATTTGACCTTCTTTTAAAACATAATTGGTCTGGCAAGATTTCAATACATTACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATAGTATATGCTGtaata                                                <  2:326420/141‑1 (MQ=255)
                                                                                gAAATGATTAATATTACCTTGATCTGTGATTTGGCCGTCTGTTAATACATAATTTTACTGACGATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGtaataa                                               >  2:925686/1‑141 (MQ=255)
                                                                                        tAATATTTCATTATTCAATGAATTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTAAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCa                                       <  2:74966/141‑1 (MQ=255)
                                                                                        tAATATTATCTCGCTCAATTATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCa                                       <  1:448191/141‑1 (MQ=255)
                                                                                        tAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTATGACCATGTTCTAATACAATATGCTGTAATAAATCCATCa                                       <  1:788362/141‑1 (MQ=255)
                                                                                              tACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTCGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGag                                 >  1:776934/1‑140 (MQ=255)
                                                                                               aCCTCGTTCAATGATTTGACCATCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGAGTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTACTAAATCCATCACTTGAtt                                <  2:638473/141‑1 (MQ=255)
                                                                                                 tccGTTCAATGATTTGTCCTTCTTTGCACACATAATTGTACTTACAAGATCTCAATAGAGGACTTAATTTATTTGTGATACTAAATAAGGTTGGACCATGTTCTAATACAATATGCTTTAATAAATCCATCACTTGATTAc                              <  2:110748/139‑1 (MQ=255)
                                                                                                 cTCGTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGAAAATATTTAAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCTTGTTCTAATACTATATGCTGTAATAAATCCATCACTTGATTAc                              <  2:217816/141‑1 (MQ=255)
                                                                                                 cTCGTTCAATGATTTGACCTGTTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTAc                              <  2:614595/141‑1 (MQ=255)
                                                                                                    gTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACAATGTTCTAATACAATATGCTGTAATAAGTCCATCACTTGATTACCGt                           >  1:921823/1‑141 (MQ=255)
                                                                                                    gTTCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTCACCATATTCTAATACAATATACTGTAATAAATCCATCACTTGTTTACCGt                           >  2:776307/1‑141 (MQ=255)
                                                                                                     ttCAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGtt                          >  2:540253/1‑141 (MQ=255)
                                                                                                       cAATGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCa                        <  2:675097/141‑1 (MQ=255)
                                                                                                        aaTGCTTTGACTTTCTTTTAAAACATAATTATACTGACAATATTTCAATACATGCCATAAGATATTTGTGATAATAAATAATTTTTGCCCATTTTATAATACAATATGCTATAATAAATCTATAACTTATTTACCTTTCaa                       >  2:372160/1‑141 (MQ=255)
                                                                                                        aaTGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCaa                       >  2:578447/1‑141 (MQ=255)
                                                                                                        aaTGATTTGACCTTCTATTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCaa                       >  1:567095/1‑141 (MQ=255)
                                                                                                         aTGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCaaa                      >  2:801807/1‑141 (MQ=255)
                                                                                                         aTGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCaaa                      >  2:44639/1‑141 (MQ=255)
                                                                                                         aTGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCaaa                      >  2:848689/1‑141 (MQ=255)
                                                                                                          tGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAGTAAATAATGTTTGACCATGTTCTAATCCAATATGCTGTAATAAATCAATCACTGCATTACCGTGCAAAg                     >  1:279199/1‑141 (MQ=255)
                                                                                                          tGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACAGTTaaaac                     >  1:652172/1‑140 (MQ=255)
                                                                                                          tGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTATAATAAATCCATCACTTGATTAACGTTCcaaa                     >  2:427694/1‑140 (MQ=255)
                                                                                                          tGATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACGTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCAAAg                     >  1:733735/1‑141 (MQ=255)
                                                                                                           gATTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCAAAGc                    <  1:294173/141‑1 (MQ=255)
                                                                                                            aTTTGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTTATTTGCGGATGACTTGATTACCGTTCAAAGCa                   <  1:264337/141‑1 (MQ=255)
                                                                                                             tttGACCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCAAAGCAt                  <  2:491347/141‑1 (MQ=255)
                                                                                                                 aCCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCAAAGCATCCaa              <  1:938796/141‑1 (MQ=255)
                                                                                                                 aCCTTCTTTTAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCAAAGCATCCaa              <  1:292895/141‑1 (MQ=255)
                                                                                                                         ttAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCAAAGCATCCAATGATGCaa      <  1:964510/141‑1 (MQ=255)
                                                                                                                          tAAAACATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCAAAGCATCCAATGATGCAAc     <  2:29779/141‑1 (MQ=255)
                                                                                                                           aaaaCATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCAAAGCATCCAATGATGCAACt    <  1:863503/141‑1 (MQ=255)
                                                                                                                           aaaaCATAATTGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTCATAATAAATAATCTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCAAAGCAGCCAATGATGCAACt    <  2:756401/141‑1 (MQ=255)
                                                                                                                             aaCATAATTGTACTGACAATCTTTCAATACATGACTTAAGTTATGTGTGCTAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCAAAGCATCCAATGATGCAACTgg  >  2:467185/1‑141 (MQ=255)
                                                                                                                             aaCATAATTGTACTGACAATATTTCAATACATGTCTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCAAAGCATCCAATGATGCAACTgg  <  1:750007/141‑1 (MQ=255)
                                                                                                                                    |                                                                                                                                      
ACTCAATCATAGTAATCCCTCTTTAATTGTGTTCTATATTTAATTAGACGTTCAGTATACGGATGCAAATGCTCATACTTGAAATGATTAATATTACCTCGTTCAATGATTTGACCTTCTTTTAAAACATAAATGTACTGACAATATTTCAATACATGACTTAAGTTATGTGTGATAATAAATAATGTTTGACCATGTTCTAATACAATATGCTGTAATAAATCCATCACTTGATTACCGTTCAAAGCATCCAATGATGCAACTGG  >  CP000730/1416326‑1416591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: