Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 1,697,768 G→A 6.5% intergenic (+24/+21) rpsT → / ← holA ribosomal protein S20/possible DNA‑directed DNA polymerase III delta subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007301,697,7680GA 6.5% 218.8 / 2.0 79intergenic (+24/+21)rpsT/holAribosomal protein S20/possible DNA‑directed DNA polymerase III delta subunit
Reads supporting (aligned to +/- strand):  ref base G (30/43);  new base A (2/4);  total (32/47)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01

AAAAATGAATTAGTAAGCTTAGCAGTTAAGTTAGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATTCATCAAGTTGATAATG  >  CP000730/1697628‑1697908
                                                                                                                                            |                                                                                                                                            
aaaaaTGAATTAGTAAGCTAAGCAGTTAAGTTAGTAGACAAAGCTGCTCAAAGTCATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAgcg                                                                                                                                              >  1:717536/1‑141 (MQ=255)
     ttgactAGTAAGCTTAGCATTTAAGTTAGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGc                                                                                                                                         <  2:318079/136‑1 (MQ=255)
     tGAATTAGTAAGCTTAGCAGTTAAGTTAGTAGACAAAGCTGATACCCGTACTATTACTCATGCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGc                                                                                                                                         <  1:753722/141‑1 (MQ=255)
     tGAACTAGTAAGCTTAGCAGTTAAGTTAGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGc                                                                                                                                         <  2:399864/141‑1 (MQ=255)
        aTTAGTAAGCTTAGCAGTTAAGTTAGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTg                                                                                                                                      >  1:438947/1‑141 (MQ=255)
         ttAGTAAGCTTAGCAGTTAAGTTAGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCACGCTTGa                                                                                                                                     >  1:772951/1‑141 (MQ=255)
            gTAAGCTTAGCAGTTAAGTTAGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACt                                                                                                                                  <  1:1034822/141‑1 (MQ=255)
             ttgatgaattattgaatattatagatgcttgtgcggaaactgattataaacttaaatcatcatatatggataaacagttaatactggaattattcattctatctttataaaAAATAAAAGTTCAAGCGCATGCTTGAACtt                                                                                                                                 >  1:955031‑M1/112‑141 (MQ=255)
             tAAGCTTAGCAGTTAAGTTAGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAACGTTCAAGCGCATGCTTGAACtt                                                                                                                                 <  2:809262/141‑1 (MQ=255)
                 cTTAGCAGTTAAGTTAGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTAt                                                                                                                             <  1:929999/141‑1 (MQ=255)
                 cTTAGCAGTTAAGTTAGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCATGCGCTTGAACTTTTAt                                                                                                                             <  1:466727/141‑1 (MQ=39)
                   tAGCAGTTAAGTTAGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTAttt                                                                                                                           <  1:3505/141‑1 (MQ=255)
                   tAGCAGTTAAGTTAGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTAttt                                                                                                                           <  2:833711/141‑1 (MQ=255)
                     gCAGTTAAGTTAGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTAttttt                                                                                                                         <  1:337941/141‑1 (MQ=255)
                     gCAGTTAAGTTAGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTAttttt                                                                                                                         >  1:570492/1‑141 (MQ=255)
                     gCAGTTAAGTGAGTAGACAAAGCTGCTCAAAGTAATGGAATACATTCAAACTAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAGTAATCTTTTTAAATTAAAGTTCAAGCGCATGCTTGAACTTTTAttttt                                                                                                                         <  1:772685/141‑1 (MQ=255)
                       agttaagttaGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTta                                                                                                                       >  1:689150/1‑141 (MQ=255)
                        gctaatttaATAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTtat                                                                                                                      <  2:1008384/139‑1 (MQ=255)
                         ttaagttaGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTtata                                                                                                                     <  1:883072/141‑1 (MQ=255)
                         ttaagttaGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTtata                                                                                                                     <  1:510383/141‑1 (MQ=255)
                         ttaagttaGTAGAAAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTtata                                                                                                                     <  1:453676/141‑1 (MQ=255)
                           aagttaGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATaaa                                                                                                                   <  2:446382/141‑1 (MQ=255)
                           aagttaGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATaaa                                                                                                                   >  1:446382/1‑141 (MQ=255)
                                    gACTAAGCGGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAgaatg                                                                                                          <  2:109401/141‑1 (MQ=255)
                                    aaCAAAGCTGCTCAAAGTAATTTAATACAGTCAAACAAAGCTGTCCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTCTATTTTTTATAAAGATAgaatg                                                                                                          <  2:808278/140‑1 (MQ=255)
                                     accaagacgctCAAAGTAATTTAATACAGTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTCCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAgaatga                                                                                                         <  2:457921/133‑1 (MQ=255)
                                     aCAAAGCTTCTAAAAGTAATTTAGTAAATTCAAACAAAGCTGACCGTATCAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAgaatga                                                                                                         <  1:847705/141‑1 (MQ=255)
                                     aCAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAgaatga                                                                                                         <  1:894981/141‑1 (MQ=255)
                                     aCAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAgaatga                                                                                                         <  2:744729/141‑1 (MQ=255)
                                     aCAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAAGAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAgaatga                                                                                                         <  1:810391/141‑1 (MQ=255)
                                      cAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAgaatgaa                                                                                                        >  2:641746/1‑141 (MQ=255)
                                      aaaaGCTGCACAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAgaatgaa                                                                                                        <  2:113119/140‑1 (MQ=255)
                                         aGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAATTAAGTAATCTTTTTAAATAAAAGTTCAAGCGCATGCTGGAACTTTTATTTTTTATAAATATGTAATGaataa                                                                                                     >  2:667662/1‑141 (MQ=255)
                                             gctCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTcc                                                                                                 >  1:160969/1‑141 (MQ=255)
                                             gctCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATAAATAATTcc                                                                                                 >  1:867461/1‑141 (MQ=255)
                                               tCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAg                                                                                               <  2:788154/141‑1 (MQ=255)
                                                 aaaGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTa                                                                                             <  2:787263/141‑1 (MQ=255)
                                                  aaGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTAt                                                                                            >  1:584748/1‑141 (MQ=255)
                                                  aaGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTACAGTAt                                                                                            >  2:54110/1‑141 (MQ=255)
                                                       aTTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACt                                                                                       <  2:53103/141‑1 (MQ=255)
                                                       aTTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACt                                                                                       <  1:653211/141‑1 (MQ=255)
                                                       aTTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACt                                                                                       <  2:180953/141‑1 (MQ=255)
                                                       aTTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAACAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAGTAATTCCAGTATTGACt                                                                                       >  2:739692/1‑141 (MQ=255)
                                                       aTTTAATACATGCAAACAAACCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACt                                                                                       <  1:726889/141‑1 (MQ=255)
                                                          tAATACATTCAAACAAAGCTGACCGTATTAAATCCCAATTCATGACTGTAAATAAATAATCTTATTAAATAAAAGATCATGAACAGGCTTGAACTGTGATTTTTTATAAAGATAGAATGAATAATTACAGTATTAACTGtt                                                                                    >  2:530822/1‑141 (MQ=255)
                                                            aaacttaaatcatcatatatggtaatacagtgaatactggaattattcattctatctttataaaAAATAAAAGTTCAAGCATGCGCTTGAACTTTTATTTTTTATAAATATAGAATGAATAATTCCGGTATGAACTGTTTa                                                                                  <  1:536300‑M1/77‑1 (MQ=255)
                                                                       caaaGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATatga                                                                       >  2:969406/1‑141 (MQ=255)
                                                                         aaGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATatgatg                                                                     <  1:728268/141‑1 (MQ=255)
                                                                             tatggataaacagttaatactggaattattcattctatctttataaaAAATAAAAGTTCAAGCATGCGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGAttt                                                                 <  2:647456‑M1/94‑1 (MQ=255)
                                                                                   taaacagttaatactggaattattcattctatctttataaaAAATAAAAGTTCAAGCATGCGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGttt                                                           <  1:502180‑M1/100‑1 (MQ=255)
                                                                                   taaaaaattaatactggaattatgcattctatctttataaaAAATAAAAGGTCAAGCATGAGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTAGTAACTGTTTATCCATATATGATGATTTAAGttt                                                           >  2:80833‑M1/42‑141 (MQ=255)
                                                                                          tCACAATTAATGACCGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCa                                                    <  1:323039/141‑1 (MQ=255)
                                                                                          acacaATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCa                                                    <  1:21266/140‑1 (MQ=255)
                                                                                            acaATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGt                                                  >  1:764923/1‑141 (MQ=255)
                                                                                            acaATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGt                                                  >  1:328820/1‑141 (MQ=255)
                                                                                               aTTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTc                                               <  2:438947/141‑1 (MQ=255)
                                                                                                ttAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCTTGTATGAGGATTTAAGTTTATAATCAGTTTcc                                              >  1:312235/1‑141 (MQ=255)
                                                                                                ttAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTcc                                              >  1:771355/1‑141 (MQ=255)
                                                                                                   aTGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGca                                           >  1:929671/1‑141 (MQ=255)
                                                                                                   aTGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGca                                           <  2:494540/141‑1 (MQ=255)
                                                                                                    tGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGcac                                          >  1:1003143/1‑141 (MQ=255)
                                                                                                     gACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTCAAGTTTATAATCAGTTTCCGcaca                                         <  2:508696/141‑1 (MQ=255)
                                                                                                       cTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAg                                       <  1:1006766/141‑1 (MQ=255)
                                                                                                              taaataaTCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCtat                                >  1:559781/1‑141 (MQ=255)
                                                                                                              taaataaTCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCAAAAGCATCtat                                >  1:516779/1‑141 (MQ=255)
                                                                                                                aatactCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTataa                              <  1:1034885/141‑1 (MQ=255)
                                                                                                                aataatCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTataa                              <  1:647444/141‑1 (MQ=255)
                                                                                                                 ataatCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAGTGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAACATCTataat                             >  1:1109613/1‑141 (MQ=255)
                                                                                                                 ataatCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTataat                             >  2:330056/1‑141 (MQ=255)
                                                                                                                   aatCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAatat                           <  2:48828/141‑1 (MQ=255)
                                                                                                                   aatCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAatat                           <  2:240790/141‑1 (MQ=255)
                                                                                                                   aatCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACGTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAatat                           <  2:233913/141‑1 (MQ=255)
                                                                                                                           taaataaaAGTTCAAGCGCATGCTTGAACTTTTATTTTATAACAAGATAGAATAAATAATACAATCTAAAACTTTTTAGCAATATATAATAATTTATGTTTTTATGTATTTTCCTAACAATCATTGATAATTTTCaataat                   >  2:809597/1‑141 (MQ=255)
                                                                                                                             aagaaaaGGTCAAGCGCATGCTTGAACTTTTATTTTTTTTAAAGATAGAATGAATAGTTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATtc                 <  2:109702/138‑1 (MQ=255)
                                                                                                                             AATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATtc                 >  2:29689‑M1/1‑141 (MQ=255)
                                                                                                                               TAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATtcat               >  1:931509‑M1/1‑141 (MQ=255)
                                                                                                                                AAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATtcatc              >  2:914398‑M1/1‑141 (MQ=255)
                                                                                                                                     TTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATTCATCAAGtt         >  2:977096‑M1/1‑141 (MQ=255)
                                                                                                                                      TCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATTCATCAAGTTg        <  1:829322‑M1/141‑1 (MQ=255)
                                                                                                                                      TCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATTCATCAAGTTg        >  1:897865‑M1/1‑141 (MQ=255)
                                                                                                                                            gcATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTATCCGCAGAAGCATCTATAATATTCAATAATTCATCAAGTTGATAATg  <  2:717536/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                            
AAAAATGAATTAGTAAGCTTAGCAGTTAAGTTAGTAGACAAAGCTGCTCAAAGTAATTTAATACATTCAAACAAAGCTGACCGTATTAAATCACAATTAATGACTGCAAATAAATAATCTTTTTAAATAAAAGTTCAAGCGCATGCTTGAACTTTTATTTTTTATAAAGATAGAATGAATAATTCCAGTATTAACTGTTTATCCATATATGATGATTTAAGTTTATAATCAGTTTCCGCACAAGCATCTATAATATTCAATAATTCATCAAGTTGATAATG  >  CP000730/1697628‑1697908

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: