| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description | 
| RA | CP000730 | 1,035,144 | C→T | 6.1% | intergenic (‑1561/‑6145) | USA300HOU_0983 ← / → USA300HOU_0984 | competence protein/glycosyltransferase | 
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 1,035,144 | 0 | C | T | 6.1% | 195.1 / 2.4 | 70 | intergenic (‑1561/‑6145) | USA300HOU_0983/USA300HOU_0984 | competence protein/glycosyltransferase | 
| Reads supporting (aligned to +/- strand): ref base C (33/30); new base T (2/2); total (37/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.78e-01 | |||||||||||
AAACATATTCTTCCATTGCTAAGTTTAAAGTTGGATCTGTAATATTATTATTACTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATGATTTAAGGAGGACTTAAAATGACT  >  CP000730/1035012‑1035282                                                                                                                                    |                                                                                                                                           acaCATATTGTTCCATTGGTAAGTTTAAAGTTGGATCTGTAATATTATTATTACTACTGAATTTAATTCTTATCTCTCCCTTATAAGTATATATATTCTCTATTTATTTATGCGTTAACTTTGCTCAAAATGGCGATtatt                                                                                                                                     >  2:445914/3‑140 (MQ=255)aaaCATATTCTTCCATTGCTAAGTTTAAAGTTGGATCTGTAATATTATTATTACTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCACATtata                                                                                                                                     >  2:784821/1‑141 (MQ=255)      atTCTTCCATTGCTAAGTTTAAAGTTGGATCTGTAATATTATTATTACTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTca                                                                                                                               <  1:209824/141‑1 (MQ=255)           tcCATTGCTAAGTTTAAAGTTGGATCTGTAATATTATTATTACTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAt                                                                                                                          >  1:763843/1‑141 (MQ=255)           tcCATTGCTAAGTTTAAAGTTGGATCTGTAATATTATTATTACTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATGTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAt                                                                                                                          <  2:502122/141‑1 (MQ=255)                tGCTAAGTTTAAAGTTGTATCTGTAATATTATTATTACTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTc                                                                                                                    <  2:934058/141‑1 (MQ=255)                 gCTAAGTTTAAAGTTGGATCTGTAGTATTATTATTACTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCt                                                                                                                   <  1:634795/141‑1 (MQ=255)                    aaGTTTAAAGTTGGATCTGTAATATTATTATTACTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTaaa                                                                                                                <  1:670738/141‑1 (MQ=255)                    aaGTTTAAAGTTGGATCTGTAATATTATTATTACTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTaaa                                                                                                                <  2:375157/141‑1 (MQ=255)                      gTTTAAAGTTGGATCTGTAATATTATTATTACGAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CCTTCTAAata                                                                                                              >  1:675574/1‑141 (MQ=255)                        ttAAAGTTGGATCTGTAATATTATTATTACTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGACAATTATATACTCACAAAT‑CATTCTAAATATc                                                                                                            >  1:715413/1‑141 (MQ=255)                            aGTTGGATCTGTAATATTATTATTACTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCt                                                                                                        <  2:588755/141‑1 (MQ=255)                                 gATCTGTAATATTATTATTACTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTCCTTATTTATGCCTTAACTTTGCCCCAAATGCCAATTCTATACTCCCCACC‑CCTTCTAAACATCGCCTTAAAg                                                                                                   >  1:475330/1‑141 (MQ=255)                                        aaTATTATTATTACTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACAtt                                                                                            <  2:626075/141‑1 (MQ=255)                                            ttattattaCTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTttat                                                                                        <  2:930419/141‑1 (MQ=255)                                              attatcaCTAATGAATTTCATTACAATCTCTCCCTGAGATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTttatta                                                                                      <  1:385912/141‑1 (MQ=255)                                               ttattaCTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATTTCGGCTTAAGGTTACATTTtattat                                                                                     >  1:711294/1‑141 (MQ=255)                                                tattaCTAATGAATTTCATTACAATCTCTCCCTTATCTCTATATATATTCTCTACTTATTTATGCCTTAATGTTTCTCAAAATTCCAATGATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTattatt                                                                                    <  1:930562/141‑1 (MQ=255)                                                tattaCTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTattatt                                                                                    <  1:336420/141‑1 (MQ=255)                                                             tttCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTTTTTGttttt                                                                       >  2:775339/1‑138 (MQ=255)                                                             tttCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAAt                                                                       <  1:478339/141‑1 (MQ=255)                                                              ttCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAAGTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATa                                                                      <  1:215479/141‑1 (MQ=255)                                                               tCATTACAATCTCTCCCTTATATCTATATAGATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAg                                                                     >  2:605374/1‑141 (MQ=255)                                                                cATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGt                                                                    <  2:783158/141‑1 (MQ=255)                                                                 aTTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGtt                                                                   >  2:425055/1‑141 (MQ=255)                                                                 aTTACAATCTCTCCCTTATATATAACTGATTTCTCTACTTATTTCTGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTACATATAGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGtt                                                                   >  2:432887/1‑141 (MQ=255)                                                                   tACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGTCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTTATTTTTAATAttttt                                                                 >  2:855549/1‑140 (MQ=255)                                                                   tACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGTCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTa                                                                 >  2:492879/1‑141 (MQ=255)                                                                   tACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTCGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTa                                                                 >  1:511747/1‑141 (MQ=255)                                                                    aCAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTAt                                                                >  1:144267/1‑141 (MQ=255)                                                                       aTCTCTCCCTTATATCTATATATATTCTCTACATATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTg                                                             >  2:913050/1‑141 (MQ=255)                                                                            tcCCTTATATCTCTATATATTCTCTACTTATTTCTGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAg                                                        <  2:897322/141‑1 (MQ=255)                                                                            tcCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAg                                                        >  1:462345/1‑141 (MQ=255)                                                                            tcCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAg                                                        <  1:281657/141‑1 (MQ=255)                                                                            ccccTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAg                                                        <  1:595207/140‑1 (MQ=255)                                                                              ccTTATATCTATATATATTCTCTACTTATTTATGGCTTAACTTTGCTCTACATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTg                                                      <  2:757052/141‑1 (MQ=255)                                                                               cTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGa                                                     >  1:185709/1‑141 (MQ=255)                                                                               cTTATAGCTATATATATTCTCTACTTATTTATGCCTTGGTTTTGCTTAGAATGCGAGTTACGTACTCACTAAT‑AACTGTAAATTCTGCCAAAAAGGGACAATTTATTATGTTTGATTGTTAAGAGTTTAATTGtgcagcga                                                     <  2:388332/141‑8 (MQ=255)                                                                                       tagatatatTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGt                                             <  2:745240/138‑1 (MQ=255)                                                                                          atatctTCTCAACTAATTTCCGCCTTAACTTTGCTCAAACTGCCAACTATATACTCACAAAT‑CATTCTAAATATCGACTTCAGGTTACATTTTATTATTTTTGATTGTTAATATTTTACTTGTTCACTGAATTTTATTAcc                                          >  2:36126/1‑140 (MQ=255)                                                                                           tatatTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACaa                                         >  1:124496/1‑141 (MQ=255)                                                                                           tatatTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACaa                                         <  1:333595/141‑1 (MQ=255)                                                                                                   ttacttactTATGCCTTAACTTGGCTCAAAATGCCAATTACACACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAAttt                                 <  2:50606/140‑1 (MQ=255)                                                                                                    tACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTa                                <  1:4337/141‑1 (MQ=255)                                                                                                       ttatttatGCCTTAACTTTGCTCAAAATGTCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGtt                             <  1:492879/141‑1 (MQ=255)                                                                                                       ttatttatGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGtt                             >  1:341741/1‑141 (MQ=255)                                                                                                       ttatttatGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGtt                             >  1:821893/1‑141 (MQ=255)                                                                                                       ttatttatGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGtt                             <  2:558840/141‑1 (MQ=255)                                                                                                       ttatttatGCCTTAACTTGGCTCAAAATGTCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGtt                             <  1:855549/141‑1 (MQ=255)                                                                                                        tatttatGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATGGTTTATTTGTTAAGTGAATTTTTGTACAATTTATTTTAGttt                            >  2:681162/1‑140 (MQ=255)                                                                                                        tatttatGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGGTAAGTGAATTTTAGTACGATATAATTTAGTTa                            >  2:406014/1‑141 (MQ=255)                                                                                                         atttatGCCTTAACTTTGCTCAAAATGCCAATTATATACTCAAAAAT‑GATTCTCGATATGGGATTGAAGTTTCCTTCTAACAGTATCGATTGTTAATATGGCAGGCGTGAAGTGAATTGTAGGATAATATAATTTAGTTAt                           >  2:81938/1‑141 (MQ=255)                                                                                                          tttatGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATg                          >  1:191728/1‑141 (MQ=255)                                                                                                          tttatGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATg                          >  1:788669/1‑141 (MQ=255)                                                                                                           ttatGCCTTAACTTTTCTCAAAATGCCAATATTATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTTGTACAATATAATTTAGTTATGa                         >  2:244466/1‑141 (MQ=255)                                                                                                             atGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATGAtt                       <  1:603038/141‑1 (MQ=255)                                                                                                                    aagttttCTCAAAATGGCAATTAAATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTGAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAACTTAGGTATGATTTAaggag                <  1:651867/138‑1 (MQ=255)                                                                                                                    aacattccccAAAATGCCACTTATCTACTCACAAAT‑CATTCTAAATATCGGCTTCAAGTTACACTGTATTATTTTTGATTGTTAATAGTTTATTTGGTAAGTGAATTTTAGCACAATATAATTTAGTTATGATTTAaggag                <  1:445914/132‑1 (MQ=255)                                                                                                                    aaCTTTGCTCAAAATGCCAATTATTTACTCACAAAT‑CACTCTAAATATCGGCCTAAAGTTACATTTTATTATTTTTGATTGTTCATAGTGGACTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATGATTTAaggag                <  1:784821/141‑1 (MQ=255)                                                                                                                       tttGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATGATTTAAGGGGGAc             >  2:794913/1‑141 (MQ=255)                                                                                                                        ttGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTTGTTATGATTTAAGGAGGACt            >  2:497438/1‑141 (MQ=255)                                                                                                                         tGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATGATTTAAGGAGGACtt           <  1:913050/141‑1 (MQ=255)                                                                                                                         tGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGAATATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATGATTTAAGGAGGACtt           >  1:447325/1‑141 (MQ=255)                                                                                                                         tGCTCAAAATGCCAATTATATACT‑ACTATTCCATCCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATGATTTAAGGAGGCCtt           >  1:935404/1‑141 (MQ=255)                                                                                                                          gCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATGATTTAAGGAGGACTTa          >  1:145739/1‑141 (MQ=255)                                                                                                                           cTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATGATTTAAGGAGGAATTaa         >  1:8456/1‑141 (MQ=255)                                                                                                                           cTCAAAAGGCCAATTATATACTCACAAAG‑CATTCTAAATATCGGCTTAAAGTTACAGTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATGATTTAAGGAGGACTTaa         >  1:597267/1‑141 (MQ=255)                                                                                                                            tCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATGATTTAAGGAGGACTTaaa        <  2:511747/141‑1 (MQ=255)                                                                                                                             cAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATGATTTAAGGAGGACTTaaaa       >  1:255037/1‑141 (MQ=255)                                                                                                                                  tGCCAATTATATACGCACAAAT‑CATTCTAAATATCGGCTTAAAGGTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATGATTTAAGGAGGAGTTAAAATGaag  >  2:715253/1‑139 (MQ=255)                                                                                                                                    |                                                                                                                                           AAACATATTCTTCCATTGCTAAGTTTAAAGTTGGATCTGTAATATTATTATTACTAATGAATTTCATTACAATCTCTCCCTTATATCTATATATATTCTCTACTTATTTATGCCTTAACTTTGCTCAAAATGCCAATTATATACTCACAAAT‑CATTCTAAATATCGGCTTAAAGTTACATTTTATTATTTTTGATTGTTAATAGTTTATTTGTTAAGTGAATTTTAGTACAATATAATTTAGTTATGATTTAAGGAGGACTTAAAATGACT  >  CP000730/1035012‑1035282 | 
| Alignment Legend | 
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG | 
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑ |