| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 38,688 | C→A | 8.7% | F12L (TTC→TTA) | maoC → | possible acyl dehydratase MaoC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 38,688 | 0 | C | A | 8.7% | 279.9 / 2.4 | 105 | F12L (TTC→TTA) | maoC | possible acyl dehydratase MaoC |
| Reads supporting (aligned to +/- strand): ref base C (42/50); new base A (2/10); total (44/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 114 total aligned reads displayed.
CAATAGAAAGTTAGAGGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACT > CP000730/38551‑38828 | cAATAGAAAGTTAGAGGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTcaaa > 2:792016/1‑141 (MQ=255) aaTAGAAAGTTAGAGGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTcaaaa > 2:907332/1‑141 (MQ=255) aTAGAAAGTTAGAGGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTcaaaaa > 1:584557/1‑140 (MQ=255) aTAGAAAGTTAGAGGTGAGTCTTACGTTTCAGTGACGGTAGAATTACATTTAACATGTTACATACTAAAAAATTAATCGGAATAAGAAAGAGATACGTATAAGAAATACGAGGATTTTATAGTAGGAGAAACATTcaaaaa > 2:1183126/1‑140 (MQ=255) tAGAAAGTTAGAGGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTAAATAAGAAAGAGAGACATATATGAAATAAGATGATTTTATAGTAGGAGAAACGTGcaagaca > 2:30997/1‑141 (MQ=255) aGAAAGTTAGAGGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTcaaaacaa < 1:319615/141‑1 (MQ=255) gAAAGTTAGAGGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTcaaaacaaa > 1:958564/1‑141 (MQ=255) aGTTAGAGGTGAGTCTTACATTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAg > 1:352641/1‑141 (MQ=255) ttAGAGGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGcc > 1:799144/1‑141 (MQ=255) ttAGAGGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGcc < 1:29701/141‑1 (MQ=255) tAGAGGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTGATAGTAGGAGAAACAATCAAAACCAAAAGCCt > 1:533555/1‑141 (MQ=255) tAGAGGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATATTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCt > 2:767741/1‑141 (MQ=255) gagGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTc > 2:181033/1‑141 (MQ=255) gagGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTc > 2:180946/1‑141 (MQ=255) gagGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTc < 2:733247/141‑1 (MQ=255) ttgTGAGTCTTACGTTTCAGTGACGGTAGACGTACCTTTAACATGTTACATACTAAAAAATTAAATTTAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGTAGAAAAATTCAAAACAAAAAGCCTTCa < 2:102406/139‑1 (MQ=255) aggttgttCTTACGTTTCAAGAAAGATAGAATTAACTTTAACATATTACATAATAAAAAAATAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATATTTGGAGAAAAAAAAAAAAAAAAAAGCCTTCa < 2:412688/134‑1 (MQ=255) agGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTCAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCa > 1:798104/1‑141 (MQ=255) ggAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTTAATAAGAAAGAGAGACATATATGCAATACGATGATTCTACAGTAGGAGAAACATTCAAAACAAAAAGCCTTCatat < 2:304107/140‑1 (MQ=255) aGTCTTACGTTTCAGTGACGGTAGACTTACTTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTa < 1:167511/141‑1 (MQ=255) aGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTa < 1:37905/141‑1 (MQ=255) tCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACCTTCAACACAAAAAGCCTCCATGttccc > 2:137162/1‑138 (MQ=255) taaaaaataagagACGGTAGACTTATCTTTAAAATGAAACATAATAAAAAATAAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAAAAAAAAAAAAAAAAAGCCTTCATATTACaga < 2:222420/129‑1 (MQ=255) cGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACagaaga < 1:22065/141‑1 (MQ=255) gTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACagaagaa < 2:942197/141‑1 (MQ=255) tCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGATATACGATGTTTTTATAGTAGGAGAAACATTCAATACAAAAAGCCTTCATATTACagaagaagca > 1:473677/1‑139 (MQ=255) aGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGATGAAGAAAt > 1:32151/1‑141 (MQ=255) aGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAAt > 1:946529/1‑141 (MQ=255) tGACGGTCGACTCACCTTTAACATGTTACATACAAAAAAATTAAATGGAAGAAGACAGAGACACGTACATCGAATACGATGATCATATGGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAAAAGAAATTa > 2:336070/1‑141 (MQ=255) tGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAAC‑AAAAGCCTTCATATTACAGAAGAAGAAATTAt > 1:457985/1‑141 (MQ=255) gACGGTAGACTTACTTTTAACATTTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTAt < 1:1146041/141‑1 (MQ=255) ggTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATcaa > 1:1100480/1‑139 (MQ=255) ggTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCa > 1:229375/1‑141 (MQ=255) tAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAAt < 1:738978/141‑1 (MQ=255) ataCTTCCCTTTAACACGTTACATACTAAAAAATTAATGTGAATAAGAAAGAGAGACACATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAAtt < 1:456617/139‑1 (MQ=255) aGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAAtt > 1:392041/1‑141 (MQ=255) aCTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTg < 1:227316/141‑1 (MQ=255) cTTACCTTTAACATGTTACATAATAAAATACGAATCTTAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGc < 2:539242/141‑1 (MQ=255) cccTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCGAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGcaac < 1:557993/140‑1 (MQ=255) aCCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGcaac < 1:162761/141‑1 (MQ=255) aCCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAAAATAAAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATCTGcaac < 2:100730/141‑1 (MQ=255) cTTTAACATGTTACAAACAACAAAATTAATTTGCATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACAAAAAAAAAAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGcaacaa < 2:59010/141‑1 (MQ=255) ttAACATGTTACATACTAAAAAATTAATTTGAATAAGAAATAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCACTTTGCAACAACt < 1:847264/141‑1 (MQ=255) tAACATGTTATATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACtt < 1:574548/141‑1 (MQ=255) tAACATGTTACATACTAAGAAATTAATTAGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAAAAAAAAAAAAAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACtt < 2:1136835/141‑1 (MQ=255) tAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACtt < 2:896768/141‑1 (MQ=255) gTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTAAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATc > 2:1102536/1‑141 (MQ=255) aTACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCaa < 2:288043/141‑1 (MQ=255) cTAAAAAATTAATTTGAATAAGAAAGAGATACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAatat < 1:774513/141‑1 (MQ=255) cTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATCATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAatat < 2:352641/141‑1 (MQ=255) atAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGATATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTCGATCCTCCatat < 1:845553/140‑1 (MQ=255) tAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAatata > 1:338781/1‑141 (MQ=255) tAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAatata < 1:1127559/141‑1 (MQ=255) attaattTGAATAAGAGAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCata > 1:666176/1‑141 (MQ=255) attaattTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCata < 1:1165982/141‑1 (MQ=255) attaattTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCata > 2:1031769/1‑141 (MQ=255) aattTGAATAAGAAAGAGAGCCATATAAGAACCACGATGATTTTAAAGCAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAatatatcactacag > 2:11423/1‑133 (MQ=255) aattTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAg > 1:836636/1‑141 (MQ=255) aattTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTGGCAACAACTTTTGATCCTCAATATATGCATATAg > 2:870208/1‑141 (MQ=255) aattTGAATAAGAAAGAGAGAAATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAg < 2:559237/141‑1 (MQ=255) aatgTGAATAAGAAAGAGAGACAGATATGAAATACTATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAg < 1:1135010/141‑1 (MQ=255) aatgTGAAGAAGAGAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAGAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAg < 2:463680/141‑1 (MQ=255) tttGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGAt > 2:1016099/1‑141 (MQ=255) gttGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTAAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATACAATTTGCAACAACTTTTGATCATCAATATATGAATATAGaa > 2:758673/2‑140 (MQ=255) ttGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATa > 1:72467/1‑141 (MQ=255) tGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATaa > 1:707213/1‑141 (MQ=255) gAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATaaa < 1:604394/141‑1 (MQ=255) aagaaaggGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTGGATCCTCAATATATGCATATAGATAAAGaaa < 2:1007259/141‑1 (MQ=255) aaggaggaaaatatatGAAATACGAGGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGataaagataaag < 2:829695/131‑1 (MQ=255) aaagaGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAg > 1:640092/1‑141 (MQ=255) aagaGAGATCTATATGAAATAAAAAGATAATAAAAAAAAAGAAACATTCAAAACAAAAAGCCTTAATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTATATCTATGCAAAAAAAAAAAAAAAAAGc < 2:551993/141‑1 (MQ=255) aagaGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACCAAATGACTACATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGc < 1:1177996/141‑1 (MQ=255) aagaGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGc < 2:198306/141‑1 (MQ=255) aagaGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATAAAGATAAAAAAAAAga > 2:262551/1‑140 (MQ=255) aaaatatatAAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACa < 2:328875/138‑1 (MQ=255) tatatGAAATACGATGATTTTATAGTAGGAGAAACATTGAAAACAAAAAGCCTTCATATTACCGAAGAAGAAATTAGCCAATTTGCAACAACTTTTTATGCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGt < 1:689402/141‑1 (MQ=255) tatatGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGt < 1:838013/141‑1 (MQ=255) agAAATACGATGATGTTATAGAAGGAAAAAAATTAAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGAt < 2:87745/140‑1 (MQ=255) gAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTTATGAACTTTAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGAtt < 1:870208/141‑1 (MQ=255) aTACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTaa > 1:1099945/1‑141 (MQ=255) tACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTaaa < 1:1016099/141‑1 (MQ=255) tACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTaaa < 1:1036673/141‑1 (MQ=255) aacgcggatTTAATAGGAGGAAAAACATTCAAAACAAAAAGCCTCCATATTACAGAAGAAGAAATTATCCAATTTGAAACAACTTTTGATCCCCAAGATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTaaa < 1:30997/135‑1 (MQ=255) aCGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAg > 2:351258/1‑141 (MQ=255) tatTGTATAGTAGGATAAACATTCAAAACAAAAAGTCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAACGTAGATTGAAAGGTATc < 1:173662/140‑1 (MQ=255) gtttttATAGTAACAGAAGAATTACAAACCAAACGCCTACAGATTACAGAAGTAGAAATTAGCCAATTTGCAACAACTTTTGATCCTCTATATATTCATAAAAAAAAAAAAAAAGCAGAACAAAGTAGATTTAAAGGTATc < 2:631332/139‑1 (MQ=255) gctttATAGTAAGAGAATGATTCAAAACAAAAAGCCTTCATATTACAGAAGAAAAAATTATACAGTTTGAAACATAATTTGATCCTCAATATTTGTATATAGCTAAAGAAAAAGGAGAACAAAGTAGATTTAAAGTGATCa > 2:23630/3‑141 (MQ=255) ttttATAGTAGGAAAAACATTCAAAACAAATAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCAt < 2:584557/141‑1 (MQ=255) ttATAGTAGGAGAACCATTCAAAACAAAAAGCCTTCATCAAAAAGCAGTAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTg < 1:682001/141‑1 (MQ=255) attgtagGAGAAACTTTCAAAACAAAAAGCCTTCATTTTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCa < 1:172042/138‑1 (MQ=255) tagtagGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAATAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCAt > 2:776835/1‑141 (MQ=255) tagtagGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCAt > 2:1166456/1‑141 (MQ=255) aggagGTGAAACATTAAGAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATAAAGAAAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATc < 2:224026/138‑1 (MQ=255) gagGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTg < 1:907332/140‑1 (MQ=255) agaAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGgcat > 1:1067301/1‑141 (MQ=255) aaCATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGgcatgca < 2:799144/141‑1 (MQ=255) cATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATa > 1:1017260/1‑141 (MQ=255) ttCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATaca > 2:923864/1‑141 (MQ=255) tCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGAGAAAGAAAAAGCAGAACAAAGTAGATTTAAAGATATCATTACATATGgcaccaacacac > 2:168955/1‑132 (MQ=255) caaaacaaaaAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACt < 1:527124/141‑1 (MQ=255) | CAATAGAAAGTTAGAGGTGAGTCTTACGTTTCAGTGACGGTAGACTTACCTTTAACATGTTACATACTAAAAAATTAATTTGAATAAGAAAGAGAGACATATATGAAATACGATGATTTTATAGTAGGAGAAACATTCAAAACAAAAAGCCTTCATATTACAGAAGAAGAAATTATCCAATTTGCAACAACTTTTGATCCTCAATATATGCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACT > CP000730/38551‑38828 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |