BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP000730	607,884	G→A	31.1%	R209* (CGA→TGA)	USA300HOU_0550 ←	deoxynucleoside kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	607,884	0	G	A	31.1%	134.4 / 77.6	106	R209* (CGA→TGA)	USA300HOU_0550	deoxynucleoside kinase
Reads supporting (aligned to +/- strand): ref base G (44/29); new base A (16/17); total (60/46)
Fisher's exact test for biased strand distribution p-value = 2.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.08e-01

Only 100 of 107 total aligned reads displayed.

GTATATGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTCCAGTATT  >  CP000730/607746‑608024

gtATATGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAg                                                                                                                                            >  1:1095737/1‑141 (MQ=255)

gaataaggtaaTTAATGTATTCGATAAAATTTATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATCCTCTATTTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAg                                                                                                                                            <  1:333194/132‑1 (MQ=255)

 tattaggaaaTTAATGTATTGGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGc                                                                                                                                           <  1:438017/133‑1 (MQ=255)

      gtgAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTGGAGCAAttt                                                                                                                                      >  2:577414/1‑141 (MQ=255)

      ctactattatattatCGATAGAATTGATAAAATAATCAATAATAACAATGGAATATACATTGAATATAATCATATACGATTTGTTTTTAGTCTTTTAACTTGTATTTACTTGTCTATATGTTTGAATTATTCAAGCAAttt                                                                                                                                      <  2:715255/127‑1 (MQ=255)

       tgAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATAAGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAAtttt                                                                                                                                     >  2:104059/1‑141 (MQ=255)

        gAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTg                                                                                                                                    <  1:435893/141‑1 (MQ=255)

        gAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTg                                                                                                                                    <  1:737326/141‑1 (MQ=255)

            tAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACACTATGTTTTTAGTATTTTATCGTGTATCTAATTGTTGTTATGTTTGAATTATTCGACCAAttttttttt                                                                                                                                >  2:1170684/1‑140 (MQ=255)

              aTGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATc                                                                                                                              <  2:153421/141‑1 (MQ=255)

               tGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACCTATACGCTATGTCTTTAGTCTTTTATCGTATATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTAACa                                                                                                                             >  2:180695/1‑141 (MQ=255)

               tGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCa                                                                                                                             >  2:705963/1‑141 (MQ=255)

               tGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCa                                                                                                                             >  1:44263/1‑141 (MQ=255)

               tGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCa                                                                                                                             >  1:1127255/1‑141 (MQ=255)

                gTATTCGATAGAATTGATATAAGAATCGTTAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCAt                                                                                                                            <  2:116989/141‑1 (MQ=255)

                gTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCAt                                                                                                                            >  1:182669/1‑141 (MQ=255)

                ataatagaacgAATTGAAAAAATAATCGAAAATATGTAATGAATATACATTAAATATAAACATATACTCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCAt                                                                                                                            <  1:82352/131‑1 (MQ=255)

                      gATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGAtt                                                                                                                      >  2:51161/1‑141 (MQ=255)

                         aGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTaa                                                                                                                   <  2:797366/141‑1 (MQ=255)

                         aGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTaa                                                                                                                   <  2:581517/141‑1 (MQ=255)

                         aGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGGGTAGCGACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTaa                                                                                                                   <  1:165273/141‑1 (MQ=255)

                           aaTTGATAAAATAATCGCTACCTTCTGTTTAATATACATTGAATATAAACAGATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAg                                                                                                                 >  2:849542/1‑141 (MQ=255)

                           aaTTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTTTCATAGGATTTaaat                                                                                                                 >  2:24845/1‑140 (MQ=255)

                            atggATAAAATGACGTATAAGCTCTATGGAATATACATTGAACATAAACATATACGCTATGTCTTGAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGa                                                                                                                <  1:1115322/138‑1 (MQ=255)

                            aTTGATAAAATAATCGATAATATCTACGGAATATACAGTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGa                                                                                                                <  1:1115334/141‑1 (MQ=255)

                             ttGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGAt                                                                                                               <  1:570542/141‑1 (MQ=255)

                              tGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGAtt                                                                                                              <  2:320627/141‑1 (MQ=255)

                               gATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTTGAGCAATTTTGTTTATCATAGGATTTAAATATTc                                                                                                             >  1:882604/1‑141 (MQ=255)

                                  aaaaTAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATTTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGGTTCggg                                                                                                          <  2:660544/141‑1 (MQ=255)

                                  aaaaTAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCggg                                                                                                          <  2:93706/141‑1 (MQ=255)

                                  aaaaTAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCggg                                                                                                          <  1:156430/141‑1 (MQ=255)

                                  aaaaTAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCggg                                                                                                          <  2:375322/141‑1 (MQ=255)

                                     ataatCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCgggggc                                                                                                       >  2:505213/1‑139 (MQ=255)

                                       aatCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATCTGTTTTAATAATTCGAGCAATTTTGTTTTTCATAGGATTTAAAGATTCGGGGTCCt                                                                                                     >  1:750110/1‑141 (MQ=255)

                                         tcgagaatactcaTGGAATATACATTTAATATAAACATATACGCTTTGTCTTTAGTCTTTTATCGTTTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATCTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTa                                                                                                   <  1:757778/129‑1 (MQ=255)

                                          cGATAATATCTATGGAATATACATTGAATATAAACATATAGGATATGTCTTTAGTATTTTATCGTGTATGTATTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATAATAGGATTTAAAGATTAGGGGTTCTTAt                                                                                                  >  2:343136/1‑141 (MQ=255)

                                          cGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTAt                                                                                                  >  1:668085/1‑141 (MQ=255)

                                          cGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTAt                                                                                                  >  1:202407/1‑141 (MQ=255)

                                          cGATAATATCTATGGAATATACATTGAATATAAACAAATACGCTCTGTCTTTCGTCCTTTATCGTGGAATTACTTGTCGAGATGGTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTACAGATTCGGGGTCCTTag                                                                                                  >  1:827773/1‑140 (MQ=255)

                                          cGATAATATCTATGGAATATACATAGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTAt                                                                                                  >  1:767522/1‑141 (MQ=255)

                                           tagaataTCTAGGTAATATACATTGAATATAAACATATACGTTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGAAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATg                                                                                                 <  2:144176/138‑1 (MQ=255)

                                             taataTCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGa                                                                                               <  2:873354/141‑1 (MQ=255)

                                                tatCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGatat                                                                                            >  1:1072424/1‑141 (MQ=255)

                                                  tCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTAGGGGTCCTTATGGATATCa                                                                                          >  1:262772/1‑141 (MQ=255)

                                                    tATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCata                                                                                        <  1:1024695/141‑1 (MQ=255)

                                                    tATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCata                                                                                        <  2:44263/141‑1 (MQ=255)

                                                     aTGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTTAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCatat                                                                                       >  2:317825/1‑141 (MQ=255)

                                                     aTGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAAGTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCatat                                                                                       <  1:1087066/141‑1 (MQ=255)

                                                      tGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAtt                                                                                      <  1:936939/141‑1 (MQ=255)

                                                          atatACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATATAAGGATTTAAAGAGTCGGGGTCCTTATGGATATCATATTCAtt                                                                                  >  1:513212/1‑141 (MQ=255)

                                                          aaataCATTGAATATAAACATATACGCTATGTCTTTATTCTTTTATCGTGTATCCACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCAtt                                                                                  <  1:1044798/139‑1 (MQ=255)

                                                           aataAATTGAATATAAACATATACGCGATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTa                                                                                 <  1:87361/140‑1 (MQ=255)

                                                             taCATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATCATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAat                                                                               >  1:137033/1‑141 (MQ=255)

                                                              aCATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAAATTCGGGGTCCTTATGGATATCATATTCGTTAata                                                                              >  1:531759/1‑141 (MQ=255)

                                                               cATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAatat                                                                             >  2:909737/1‑141 (MQ=255)

                                                                 ttGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTg                                                                           >  1:13798/1‑141 (MQ=255)

                                                                       ataAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGt                                                                     <  2:776453/141‑1 (MQ=255)

                                                                         aaaGATATACGCTATGTCTTTAGTCTTTTGTGGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTGGGGGTCCTTATGGATATCATATTAATTAATATTGATACGTaa                                                                   >  2:55815/1‑140 (MQ=255)

                                                                         aaaCATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTAc                                                                   >  2:644756/1‑141 (MQ=255)

                                                                           aCATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACaa                                                                 >  1:702594/1‑141 (MQ=255)

                                                                           aCATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACaa                                                                 >  2:611910/1‑141 (MQ=255)

                                                                               ttaggCTATGTTTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTgg                                                             <  2:32945/137‑1 (MQ=255)

                                                                               ataCGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTgg                                                             <  2:220548/141‑1 (MQ=255)

                                                                                taCGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGa                                                            >  1:650727/1‑141 (MQ=255)

                                                                                taCGCTATGGCTTTAGTCTTTTATCGTGTATCTATTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGa                                                            <  2:1127595/141‑1 (MQ=255)

                                                                                 aCGCTATGTCTTTAGTCTTTTATCGTGTATCTATTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGAc                                                           <  2:465910/141‑1 (MQ=255)

                                                                                  cGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACa                                                          >  2:1046045/1‑141 (MQ=255)

                                                                                      attgcTTCAGTCTTTTATCGTGTATCTACTTGTCGATACGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTCAAAGATTCGGGGTCCTTATGGATATCATATTCACTAATATTGATACGTACAACTGGACATGCa                                                      <  1:404356/137‑1 (MQ=255)

                                                                                       tGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCAt                                                     <  1:794106/141‑1 (MQ=255)

                                                                                         tCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTAATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTa                                                   >  1:43061/1‑141 (MQ=255)

                                                                                            ttAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAg                                                <  2:1095737/141‑1 (MQ=255)

                                                                                            ttAGTCTTTTATCGTGGATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAg                                                <  2:829835/141‑1 (MQ=255)

                                                                                                    ttATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTGATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAAt                                        >  2:1025040/1‑141 (MQ=255)

                                                                                                    ttATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAAt                                        <  2:831039/141‑1 (MQ=255)

                                                                                                    ttATCGTGTATCTACTTGTCGATATGGTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAAt                                        <  2:221759/141‑1 (MQ=255)

                                                                                                     tATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATc                                       <  2:2063/141‑1 (MQ=255)

                                                                                                       tCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTATTGATCAGAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCa                                     >  1:629985/1‑141 (MQ=255)

                                                                                                        cGTGTATCTACTTGTCGATAAGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCaa                                    >  1:756614/1‑141 (MQ=255)

                                                                                                         gtgtATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAAt                                   >  2:608791/1‑141 (MQ=255)

                                                                                                         gtgtATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAAt                                   >  1:840124/1‑141 (MQ=255)

                                                                                                              tCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGACTTCCAAATTCGGGGTCCTAATGGATATTATATTCATTAATATTGATACGTACAACTGGACATGCATGAAAGCTATTAATCCAATCTTCa                              >  1:279769/1‑141 (MQ=255)

                                                                                                               cTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAACGCTATTAATCCAATCGCCaa                             >  2:102228/1‑140 (MQ=255)

                                                                                                                tACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATa                            >  2:1065096/1‑141 (MQ=255)

                                                                                                                tACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATa                            >  1:699633/1‑141 (MQ=255)

                                                                                                                 aCTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAACCCAATCGTCATAg                           >  2:861563/1‑141 (MQ=255)

                                                                                                                  cTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTTAAGCTATTAATCCAATCGTCATAGc                          >  1:838606/1‑141 (MQ=255)

                                                                                                                  cTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGc                          <  2:249040/141‑1 (MQ=255)

                                                                                                                   ttGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCg                         >  1:720323/1‑141 (MQ=255)

                                                                                                                    tGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGt                        >  2:645082/1‑141 (MQ=255)

                                                                                                                     gTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGtt                       >  1:1018217/1‑141 (MQ=255)

                                                                                                                      tCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGttt                      >  2:868717/1‑141 (MQ=255)

                                                                                                                      tCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTACTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTATTCCAATCGTCATAGCGttt                      >  2:665123/1‑141 (MQ=255)

                                                                                                                       cGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGAGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTa                     >  1:996754/1‑141 (MQ=255)

                                                                                                                        gATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGtttga                    >  2:967623/1‑139 (MQ=255)

                                                                                                                           atGTTTGAATAATTCGAGCCATTTTGTTTATCATAGGAATTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATAGGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATa                 >  1:668849/1‑141 (MQ=255)

                                                                                                                           atGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATa                 >  1:505296/1‑141 (MQ=255)

                                                                                                                           atGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATa                 >  1:277962/1‑141 (MQ=255)

                                                                                                                              tttGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCt              >  1:1068109/1‑141 (MQ=255)

                                                                                                                                    taatTCGAGCAATTTTTTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTcc        <  2:901498/141‑1 (MQ=255)

                                                                                                                                          gAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTCCAGTAtt  <  1:648934/141‑1 (MQ=255)

GTATATGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTCCAGTATT  >  CP000730/607746‑608024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`