| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 1,067,178 | A→G | 4.1% | S128S (TCT→TCC) | qoxC ← | quinol oxidase subunit III |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 1,067,178 | 0 | A | G | 4.1% | 338.7 / 2.1 | 115 | S128S (TCT→TCC) | qoxC | quinol oxidase subunit III |
| Reads supporting (aligned to +/- strand): ref base A (61/45); new base G (3/2); total (67/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
CTATAAATAATTTTGGCGCATTATATTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCTTGGCGCATGTAGT > CP000730/1067042‑1067317 | cTATAAATAATTTTGGCGCATTATATTTGTCTAATCCGCGGCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTGGCGATACGTGACAACCATGCGTTCCTAATAGGATAAGGATACTACACCAGTACGAAc > 1:690896/1‑141 (MQ=255) tataAATAATTCTGGCGCATTATATTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAAcc < 2:94057/141‑1 (MQ=255) ataaataaTTTTGGCGCATTATATTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCa < 1:511547/141‑1 (MQ=255) aaataaTTTTGGCGCATTATATTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAGGAACCAAt > 1:173170/1‑141 (MQ=255) aaataaTTTTGGCGCATTATATTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAGGAACCAAt > 1:172949/1‑141 (MQ=255) aaataaTTTTGGCGCATTATATTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAt < 2:1020629/141‑1 (MQ=255) ataatTTTGGCGCATTATATTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAt‑tg > 2:755372/1‑141 (MQ=255) tGGCGCATTATATTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGtt > 1:674489/1‑141 (MQ=255) tGGCGCATTATATTTAGCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGtt > 1:891599/1‑141 (MQ=255) ggCGCATTATATTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTa > 2:161211/1‑141 (MQ=255) cgcATTATATTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCGCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGAACAGTAAGAACCAAT‑TGTTGGGTTAAc > 1:371995/1‑141 (MQ=255) cATTATATTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGc > 2:1082707/1‑141 (MQ=255) cATTATATTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGc > 2:288449/1‑141 (MQ=255) tataTTTGTCTACTCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTCATAGGATAAAGAAACTAGGCACGAATGTACTAAT‑TGTTGGGTTAACGCCtt > 2:1142966/1‑141 (MQ=255) ttatTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTc < 2:1061714/140‑1 (MQ=255) tatTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATAGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCt > 1:1130931/1‑141 (MQ=255) ttGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGAt < 2:960113/141‑1 (MQ=255) tGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATg < 1:1155553/141‑1 (MQ=255) aTCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTACGGCCTCTTGATGCATTgt > 2:769828/1‑141 (MQ=255) aTCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCCTAgt > 1:1167005/1‑141 (MQ=255) cgtcgtTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCAAGGTGTGCg > 1:1110733/1‑141 (MQ=255) gtcgtTGGATTTGGCTTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGATCCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGa < 1:854868/141‑1 (MQ=255) gtTGGATTTGGATGAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGGTAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGccactt > 2:889711/1‑136 (MQ=255) tggatttggattAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGATAACGCATTCCGATGCCCAGCGTGCGAATTCa > 2:1201312/1‑141 (MQ=255) ggatttggattAATAAACAACTGGCCCAGACGATACCTAGCGATACGTGACAACGATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCAt > 1:775530/1‑141 (MQ=255) taggattAATAAACAAATGGCCCAAACGACACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAAt < 1:386727/139‑1 (MQ=255) ggattAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAAttt < 1:89320/141‑1 (MQ=255) ggattAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAAttt < 1:919277/141‑1 (MQ=255) gattAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTCATGCATAGTGTTCGAATTCATAAATTTc > 1:214300/1‑141 (MQ=255) aataaACAAACGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAGGAACCAAT‑TGTTGGGTTAACGCCTTCCGATGCATAGTGTGAGAATTGATAAATTTCGAAt > 2:669485/1‑141 (MQ=255) ataaACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATc < 1:856967/141‑1 (MQ=255) aaaaCAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATcc < 1:1022052/140‑1 (MQ=255) aaaCAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCca > 2:908899/1‑141 (MQ=255) aaaCAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCAAAGTGTGCGCATTCATAAATTTCGAATCca > 1:1194223/1‑141 (MQ=255) cAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCcaaca < 2:461164/141‑1 (MQ=255) cAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCATAAGAGGGTAAAGAAACTAGACCAGTAAGCACCACTCTGTT‑GTTTTAGTCCTTCTGATGTATAGTGTGTGAATTCATAAATTTCGAATCcaaca > 2:250353/1‑141 (MQ=255) cAAATGACCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCAAATCGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCcaaca < 1:1054735/141‑1 (MQ=255) aaTGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACaaa < 1:379866/141‑1 (MQ=255) ggCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGAc < 2:962061/141‑1 (MQ=255) cccAACCGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGCTGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTa < 1:525102/141‑1 (MQ=255) cccAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGTAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGCTGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTa > 2:472098/1‑141 (MQ=255) cccAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTa > 2:147393/1‑141 (MQ=255) cccAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCAAACAAAGACTa > 2:323691/1‑141 (MQ=255) cccAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATACAACCAAGACTa > 2:928366/1‑141 (MQ=255) cccAAACGAGAGCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTa > 2:1037026/1‑141 (MQ=255) ccAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTaa > 1:1167799/1‑141 (MQ=255) gATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTaa < 1:748777/141‑1 (MQ=255) caTACCTTGCGATCCGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTaa < 1:547905/140‑1 (MQ=255) aTACCTAGCGAGACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCATTCTGATGCATCGTGTGAGTAATCACAAATTTCGAATCCAACAAAGACTAAACCTaca > 2:539840/1‑139 (MQ=255) tACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTaaaa < 2:265995/141‑1 (MQ=255) aCCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAATACTAAACCTAAAAg > 2:214131/1‑141 (MQ=255) aCCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAg > 1:153761/1‑141 (MQ=255) aCCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACAAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGACTCCCACAAAGACTAAACCTAAAAg > 2:147016/1‑141 (MQ=255) cTAGCGATACGTGACAACCATGCGTTCCGAATAGGATAAAGAAACTAGACCGGTAAGTACCAAT‑TGTTGTGTTAACGCCCTCTGATACGTGGTGTGCGCGTTCATAAATTTCGAATCAAACCAAGACTAAACCTAAAAGTa > 2:827/1‑141 (MQ=255) aGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAAc < 1:531779/141‑1 (MQ=255) aGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAAc > 2:678967/1‑141 (MQ=255) tACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAAt > 1:1098101/1‑141 (MQ=255) aCGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATg > 1:688726/1‑141 (MQ=255) cGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGa > 1:728507/1‑141 (MQ=255) cGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGa < 1:755372/141‑1 (MQ=255) gACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGataa > 1:6513/1‑139 (MQ=255) cAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGatcatc > 2:65074/1‑141 (MQ=255) cAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGatcatc < 2:920449/141‑1 (MQ=255) aaCCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATcc > 2:1058044/1‑141 (MQ=255) aaCCATGCGTTCCGAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATcc > 2:733374/1‑141 (MQ=255) aCCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCa > 1:746788/1‑141 (MQ=255) cATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑GGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAAACTAAAAGTAACGTAATGATCATCCaaa > 2:698185/1‑141 (MQ=255) tCCTAATGGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGCAATGATCATCCAAAAcatcat < 1:621936/141‑1 (MQ=255) ccTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCAtt > 1:195678/1‑141 (MQ=255) ccTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCAtt < 2:718896/141‑1 (MQ=255) ccTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCAAAGTGTGCGAATTCATAAATTTCGGATCCAACAAAGACTAAACCTAAACGTAACGTAATGATCACCCAAAAAAACAtt > 2:667874/1‑141 (MQ=255) tAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAACGATCATCCAAAACATCATTaa > 2:1069404/1‑141 (MQ=255) tAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACtt < 1:288449/141‑1 (MQ=255) tAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACtt < 2:40714/141‑1 (MQ=255) tAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACtt < 1:1082707/141‑1 (MQ=255) aGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTTTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACttt < 2:371995/141‑1 (MQ=255) aGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACttt > 1:369376/1‑141 (MQ=255) gATAAAGAAACTAGAACAGTAAGAAGCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGAGAATTCATAAATTTCGAATCGAAGAAAGACTAAACCTAAAAGTAAAGTAATGAAGATCGAAAAAAGAATTAAATTTTg > 2:776031/1‑141 (MQ=255) tAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTTATAAATTTCGAATCCAACAAAGACTAAACCTAAACGTAACGTAATGATCATCCAAAACATCATTAACTTTTGtt < 2:891599/141‑1 (MQ=255) tAAAGAAACCAGACCAGTAAGAACCAAT‑TCTTGGGTTAACGACTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAACCCAACAAAGTCTATACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGtt < 1:35873/141‑1 (MQ=255) aaGAAACTAGACCAGTAAGAACCAAT‑CGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAATAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGtttt < 1:734263/141‑1 (MQ=255) gAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGtttttt > 1:177462/1‑140 (MQ=255) gAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTc > 1:753283/1‑141 (MQ=255) gAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTc < 1:984405/141‑1 (MQ=255) gAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTc < 1:984667/141‑1 (MQ=255) aaaCTAGGCCAGTAGGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCt < 2:172949/141‑1 (MQ=255) aagaGACCAAGAAGAACCAGT‑TGTTGGGTTAACGCCTTCTGATGCATAGTTTGCGAATGCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCTTg < 2:40830/138‑1 (MQ=255) aCTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCtgg > 1:860253/1‑139 (MQ=255) aCTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCTTg > 1:18212/1‑141 (MQ=255) aCTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCTTg > 1:974680/1‑141 (MQ=255) aCTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCTTg > 1:587795/1‑141 (MQ=255) aCTACACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCTTg < 2:876952/141‑1 (MQ=255) ctatcccAGTACGTACCAAT‑TGTTGGGTTAACGCCTTCTGATGAAGAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCTTgg < 2:417901/136‑1 (MQ=255) tAGCCCAGTAAGAACCAAT‑TGGTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCTTGgc < 2:245491/141‑1 (MQ=255) aGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCTTGgcg > 1:958183/1‑141 (MQ=255) aCCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGACTCCAACAAAGACTAAACCTAAAAATAACGTAATGATATTCCAAAACATCATTAACTTTTGTTTTTCCTGtcgat > 2:418419/1‑139 (MQ=255) aCCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTATCTTTTGTTTTTCTTGGCGCa < 1:728113/141‑1 (MQ=255) aCCAATAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCGACAAAGACTACACATTGAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCTTGGCGCa > 1:816290/1‑141 (MQ=255) atAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATCAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCTTGGCGCATgta < 2:424580/140‑1 (MQ=255) aaGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCTTGGCGCATgtagt > 1:1072996/1‑141 (MQ=255) | CTATAAATAATTTTGGCGCATTATATTTGTCTAATCCGCGTCGTTGGATTTGGATTAATAAACAAATGGCCCAAACGATACCTAGCGATACGTGACAACCATGCGTTCCTAATAGGATAAAGAAACTAGACCAGTAAGAACCAAT‑TGTTGGGTTAACGCCTTCTGATGCATAGTGTGCGAATTCATAAATTTCGAATCCAACAAAGACTAAACCTAAAAGTAACGTAATGATCATCCAAAACATCATTAACTTTTGTTTTTCTTGGCGCATGTAGT > CP000730/1067042‑1067317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |