BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP000730	2,774,969	A→G	10.1%	D739D (GAT→GAC)	clfB ←	clumping factor B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	2,774,969	0	A	G	10.1%	190.9 / 2.2	92	D739D (GAT→GAC)	clfB	clumping factor B
Reads supporting (aligned to +/- strand): ref base A (41/36); new base G (4/9); total (47/45)
Fisher's exact test for biased strand distribution p-value = 2.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTGTCTGAA  >  CP000730/2774833‑2775107

ctgaatctgagtCACTTTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGc                                                                                                                                        <  2:532593/141‑1 (MQ=255)

      gtgggtctcTGTCGGGATCCGAATCGCTATCTGAAGCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTatctg                                                                                                                                  <  2:454537/133‑1 (MQ=14)

       cgagtcACTGTCTGAATCTGACTCACTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGATTCGCTATCTGACTCTGAGTCGCTGTATCAGTATGAAGTCCTatcttg                                                                                                                                 >  2:330152/5‑139 (MQ=11)

        gaatcACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTatccgaa                                                                                                                                >  2:77776/1‑141 (MQ=255)

          atcACTGTCTGAATCCGAATCCCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTatctgaatc                                                                                                                              <  1:457820/141‑1 (MQ=255)

            cACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTGCGAGTCGCTATCTGAATCTGAGTCGCTGTTTGAGTCGGAGGCGATatctgtatgtg                                                                                                                            >  2:228066/1‑141 (MQ=17)

              cTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAg                                                                                                                          >  1:730661/1‑141 (MQ=255)

              cTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAg                                                                                                                          <  2:730152/141‑1 (MQ=255)

                 tCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTCTCTGAGTCTGAGTCg                                                                                                                       >  2:586982/1‑141 (MQ=255)

                 tCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCg                                                                                                                       >  1:675016/1‑141 (MQ=255)

                 tCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCg                                                                                                                       >  1:180150/1‑141 (MQ=255)

                  cTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGc                                                                                                                      >  1:682217/1‑141 (MQ=255)

                          gAATCGCAATCGGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGACCCTAcctgag                                                                                                              >  2:641094/1‑141 (MQ=14)

                            aTCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGGTAgctgagtc                                                                                                            >  2:65732/1‑141 (MQ=255)

                             tCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGCTTCGCTATCTGCATCTGAGTCGCTAtctcagtct                                                                                                           >  1:646575/1‑141 (MQ=255)

                                cTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGGGTCGCTGtctgagtttgag                                                                                                        >  2:635144/1‑141 (MQ=14)

                                  ctctgaatctgaaTCACTATCCGAGTCCGAGTCGCTCTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtc                                                                                                      <  2:691356/140‑1 (MQ=255)

                                   tctgaatctgaaTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTGtctgagtctgagtcg                                                                                                     >  2:258082/1‑141 (MQ=255)

                                   tctgaatctgaaTCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctaagcctgagtcg                                                                                                     >  2:391914/1‑141 (MQ=255)

                                    ctgaatctgaatCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgc                                                                                                    >  1:179264/1‑141 (MQ=255)

                                      gaatctgaatcGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCGGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgcta                                                                                                  >  1:538718/1‑140 (MQ=255)

                                         tctgaatcGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCGCTATCTGCATCTGAGTCGCTAtctgagtctctgcccctgact                                                                                               >  1:6958/1‑129 (MQ=14)

                                            gaatcGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCGCTGgctgagtctgagtcgctgtctgag                                                                                            >  2:640529/1‑141 (MQ=255)

                                            gaatcGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgctgtctgag                                                                                            <  1:599878/141‑1 (MQ=255)

                                              gtcGCTTTCCGAGTCTGAGTCGTTGTCTGAGTCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTAtctgagtctgagtcgctgtctgagtc                                                                                          <  2:154376/140‑1 (MQ=14)

                                              atcGTTAGCTGAGTCTGAGTCGTTGTCTGAATCTGATGCGCTGTCTGTGTCCGAATCGCTCTCTGATTCTGTGTCGCTGTTTGAGACTGAATCGCTATCAGAGTCTGAGTTGCTAtctgactctgagtcgctgtctgagtc                                                                                          <  2:724029/141‑1 (MQ=14)

                                              atcGCTATCCGAGTCTGGGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgctgtctgagtc                                                                                          <  1:594947/141‑1 (MQ=255)

                                              atcGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAGTCTGAGTCGCTAtctgagtctgagtcgctgtctgagtc                                                                                          <  2:441786/141‑1 (MQ=255)

                                               tcGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGCATAGCTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgaggctgacacgctgtctgagtct                                                                                         >  2:500677/1‑141 (MQ=14)

                                                cGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgctgtctgagtctg                                                                                        <  1:494356/141‑1 (MQ=255)

                                                 gCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGGATCTGAGTCGCTAtctgagtctgagtcgctgtctgagtctgg                                                                                       >  2:684924/1‑140 (MQ=255)

                                                 gCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgctgtctgagtctga                                                                                       <  1:394497/141‑1 (MQ=255)

                                                 ccTATCCGACTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgctgtctgagtctga                                                                                       <  2:581459/140‑1 (MQ=255)

                                                  tcaTCCCAGTTTTAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCCGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgctgtctgagtctgag                                                                                      <  2:628909/139‑1 (MQ=255)

                                                  cTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgctgtctgagtctggg                                                                                      >  1:644330/1‑139 (MQ=255)

                                                  cTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgctgtctgagtctgag                                                                                      >  2:486407/1‑141 (MQ=255)

                                                    ttCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgctgtctgagtctgagtc                                                                                    <  1:714820/140‑1 (MQ=255)

                                                    ctCCGAGTCTGAGCCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgctgtctgagtctgagtc                                                                                    <  1:297866/140‑1 (MQ=255)

                                                      ccGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgctgtctgagtctgagtcgc                                                                                  >  2:315520/1‑141 (MQ=255)

                                                        gAGTCTGCGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTAtctgagtctgagtcgctgtctgagtctgagtcgctg                                                                                >  1:483449/1‑141 (MQ=255)

                                                         ggTCTGAGTCGCTGTCTGAATCCGAATCGCTTTCTGAGTCCGAATCGCTATCTGAATCTGAGTCCCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATctgagtctgagtcgctgtctgagtctgagtcgctgt                                                                               <  2:12308/140‑1 (MQ=255)

                                                            ttgattggcttgttgaatctgaatcGCTGTCTGAGTCCGAGTGGTTATTTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGagtctgagtcgctgtctgagtctgagtcgctgtctg                                                                            <  2:53107/128‑1 (MQ=14)

                                                            ttGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGagtctgagtcgctgtctgagtctgagtcgctgtctg                                                                            <  1:547535/140‑1 (MQ=255)

                                                              gagtcgtgtcctgagtctgaatCGCTTTCTGAGGCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGtctgagtcgctgtctgagtctgagtcgctgtctgag                                                                          <  2:384648/131‑1 (MQ=14)

                                                              gAGTCGCTGTCTGATTCTGATTCGCTTTCTGAGTCTGAATCGCTATCTGATTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGtctgagtcgctgtctgagtctgagtcgctgtctgag                                                                          <  2:340479/141‑1 (MQ=14)

                                                                gTCGCTGTCTGAATCTGAATCGCTCTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCtgagtcgctgtctgagtctgagtcgctgtctgagtc                                                                        >  1:560072/1‑141 (MQ=255)

                                                                  cGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGACTCGCTGTCTGCATCTGAGTCGCTGTCTGAGTCtgattcactgtatgcatctgagtccctgtctgagtcgc                                                                      >  2:226108/1‑139 (MQ=11)

                                                                  cGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAAGCTGGGTCGCTGTCTGAGTCTGGGTCGCTGTCTGACTCTTATACGCGGTCTGagtctcgttcgatgtctgagtctgagacgctgtctgggagtc                                                                      >  2:226037/1‑135 (MQ=2)

                                                                  cGCTGAATGATTTTGCATCGCTGTCAGAGTCCGATGCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGagtcgctgtctgagtctgagtcgctgtctgagtctg                                                                      <  1:746622/141‑1 (MQ=14)

                                                                   ccTGTCTGAATCTGAGTCGCTGTCTGAGTCCGAGTCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAgtcgctgtctgagtctgagtcgctgtctgagtctga                                                                     <  2:707488/140‑1 (MQ=255)

                                                                    cTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGagtcgcggtctgagtctgagtcgctgtctgaggctgga                                                                    >  2:245046/1‑139 (MQ=255)

                                                                       tctgagtctgaaTCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCg                                                                 <  1:601404/141‑1 (MQ=255)

                                                                       tctgaatctgaaTCGCTGTCTGAGTCCGAATCGCTACCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCg                                                                 <  1:415151/141‑1 (MQ=255)

                                                                        ctgaatctgaatCGCTATCTGAGTCCGAATCGGTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGc                                                                <  2:439740/141‑1 (MQ=255)

                                                                         tgaatctgaatcGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTatctgaat                                                                                                                               >  1:323721/1‑77 (MQ=35)

                                                                          gaatctgaatcGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTa                                                              <  1:636099/141‑1 (MQ=255)

                                                                           aatctgaatcGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTat                                                             <  1:229064/141‑1 (MQ=255)

                                                                            atctgaatcGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTatc                                                            >  1:212070/1‑141 (MQ=255)

                                                                            atctgaatcGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGACTCTGAAACGCTatc                                                            >  2:412456/1‑141 (MQ=255)

                                                                            atctgaatcCCTGCCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTatc                                                            <  2:412699/141‑1 (MQ=255)

                                                                               tgaatcGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTatctga                                                         <  1:616504/141‑1 (MQ=255)

                                                                                gaatcGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTCTCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTCTCTGGGTCTTAATCGCTatatgaa                                                        >  2:309876/1‑141 (MQ=14)

                                                                                gaatcGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCGGGCGGAGTCTGAGGCGCTGTCTGAGTCTGAATCGCTatctgaa                                                        >  1:399635/1‑141 (MQ=255)

                                                                                 actcGTTGTCCGAGTCCGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTatctgaat                                                       <  2:378570/139‑1 (MQ=14)

                                                                                  atcGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTatctgaatc                                                      <  1:374896/141‑1 (MQ=255)

                                                                                  atcGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTatctgaatc                                                      >  1:82274/1‑141 (MQ=255)

                                                                                     tctatCTGCGTCCGAGTCGCTATCTGAATCTGAGTCGCCGTTCGAGTCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTatctgaatctga                                                   <  2:300158/137‑1 (MQ=14)

                                                                                     cccatccgggTCCGATTCGCTATCTGAGTCTGCGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCACTGTCTGAGTCTGAATCGCTatctgaatctga                                                   <  2:189301/132‑1 (MQ=17)

                                                                                      cTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGGATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTATGAGTCTGAGTCGCTGTATGAGTCTGAATGGCTATATGAATCTGAg                                                  >  1:12481/1‑141 (MQ=17)

                                                                                           tGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTgtctggatctgaatggcg                                             >  2:627773/1‑135 (MQ=255)

                                                                                           tGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGGGTCGCt                                             >  1:310226/1‑141 (MQ=255)

                                                                                             aGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGACTCACTgt                                           >  2:217715/1‑141 (MQ=255)

                                                                                               tCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGGCGCTgcct                                         >  2:485527/1‑141 (MQ=255)

                                                                                                ccGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTgtctg                                        >  1:571973/1‑141 (MQ=255)

                                                                                                  gAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTgtctgag                                      <  1:596750/141‑1 (MQ=255)

                                                                                                  gAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTgtctgag                                      <  1:27504/141‑1 (MQ=255)

                                                                                                    aTCACTATCTGAATCTGAGTCGCTGTCTGAGGCTGAATCGCTATCTGAATCTAAGTCCCTATCTGAACCTGAGTCCCGGTCTGAGTCTGTCTCACTGTCTGAGTCTGGATCGCTATCTGAATCTGAGGCGCTgtctgagtc                                    >  2:328840/1‑141 (MQ=14)

                                                                                                      cGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTgtctgagtctg                                  >  1:623179/1‑141 (MQ=255)

                                                                                                          ttctgactcttaTTCGCGGTCTGTGCTTGAGTCGCTTTCTGCATCTGAGTCGCTATCTGGGTCTGAGTCGCTGTCTGAGTCCGAGTCGCTGTCTGAGTTTGAATCGCTATCTGACTCTGAGTCGCCGTCtgagtccgagtc                              <  2:106155/140‑1 (MQ=14)

                                                                                                           tctgaatctgaGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTTTGAATCGCTTTCTGAATATGAATCGCTgtctgagtctgaatgg                             >  2:275179/1‑137 (MQ=14)

                                                                                                           tctgaatctgaGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGtctgagtcg                             <  1:228066/141‑1 (MQ=255)

                                                                                                           tctgaatctgaGTCGCTGTATGATTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTTAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTATGAATCTGAATCGCTGTCGGCAtcagagtcg                             >  2:354523/1‑141 (MQ=11)

                                                                                                                atctgaGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGtctgagtcgctgtc                        >  1:252889/1‑141 (MQ=255)

                                                                                                                acctgaGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGtctgagtcactgtc                        >  2:702173/3‑141 (MQ=255)

                                                                                                                   cctggcGCTGTCTGAGTCTGAGTCGCTATCTGATTCTGAGTCGCTATCTGTGTCTGGGTCGCTGTCTGAGTCTGAGTCGCTGTTTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGtctgagtcgctgtctga                     <  2:377390/136‑1 (MQ=17)

                                                                                                                     cgttgCTGTCTGAGTCTGAATCGCTATCTGACTCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGtctgagtcgctgtctgaat                   <  2:236744/137‑1 (MQ=255)

                                                                                                                     aGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGtctgagtcgctgtctgaat                   <  1:486407/141‑1 (MQ=255)

                                                                                                                      gTCGCTGTCGGTGTCTGTGTCGCTTTCTGAGGCTGTGTCGCTGTCTGAGTCTGTGTCGCTGTCTGGGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGtctgagtcgctgtctgaatc                  <  2:406030/141‑1 (MQ=14)

                                                                                                                        cGCTGTCTGCGTCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGtctgagtcgctgtctgaatctg                <  2:272582/141‑1 (MQ=255)

                                                                                                                           tGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGtctgagtcgctgtctgaatctgagt             >  2:385083/1‑141 (MQ=255)

                                                                                                                                gaatctgaGTCGCTATCTTAGTCTGTGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAGtctgagtcgctgtctgaatctgagtcgctg        <  2:355197/138‑1 (MQ=11)

                                                                                                                                      gaAGCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGtctgagtcgctgtctgaatctgagtcgctgtctgaa  <  1:649307/141‑1 (MQ=255)

CTGAATCTGAATCACTGTCTGAATCCGAATCGCTATCTGAATCTGAATCGCTATCCGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTGTCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTGTCTGAA  >  CP000730/2774833‑2775107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`