Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 1,056,257 C→A 17.1% intergenic (‑1758/+1909) sspA ← / ← USA300HOU_0997 S01 family glutamyl endopeptidase/bifunctional N‑acetylmuramoyl‑L‑alanine amidase/mannosyl‑glycoprotein endo‑beta‑N‑acetylglucosaminidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007301,056,2570CA17.1% 117.5 / 6.1 63intergenic (‑1758/+1909)sspA/USA300HOU_0997S01 family glutamyl endopeptidase/bifunctional N‑acetylmuramoyl‑L‑alanine amidase/mannosyl‑glycoprotein endo‑beta‑N‑acetylglucosaminidase
Reads supporting (aligned to +/- strand):  ref base C (34/17);  new base A (3/9);  total (37/26)
Fisher's exact test for biased strand distribution p-value = 1.96e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TTGAAAATTGGCGAATACTTGGTGCTCTTAAATATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACTTAGACAGTATAAAATTATGAATCTTTAAACTGTG  >  CP000730/1056118‑1056396
                                                                                                                                            |                                                                                                                                           
ttGAAAATTGGCGAATACTTGGCGCTTCTAACTCTTTAGGAATAGAATTTAAAGAAAGTTTCATGTGTACCACCGTGATTTTTGATCAAATATTGTGTTTAAATTTGGAAGGTGTTAATATCATAACATACTTTTAAAGc                                                                                                                                             <  2:364876/140‑1 (MQ=255)
   aaaaTTGGCGAATACTTGGTGCTCTTAAATATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCaaa                                                                                                                                          <  1:186533/140‑1 (MQ=255)
    aaaTTGGCGAATACTTGGTGCTCTTAAATATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCaaaa                                                                                                                                         >  2:655559/1‑140 (MQ=255)
    aaaTTGGCGAATACTTGGTGCTCTTAAATATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCaaaa                                                                                                                                         >  1:480479/1‑140 (MQ=255)
    aaaTTGGCGAATACTTGGTGCTCTTAAATATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCaaaa                                                                                                                                         >  2:640038/1‑140 (MQ=255)
    aaaTTGGCGAATACTTGGTGCTCTTAAATATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAAAATACTTTTAAAGCaaaa                                                                                                                                         >  2:175023/1‑140 (MQ=255)
           cGAATACTTGGTGCTCTTAAATATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTa                                                                                                                                  >  1:661974/1‑140 (MQ=255)
                 cTTGGTGCTCTTAAATATTTAGAATTAGAATTTCTTCTGAAACACATTTGTGTATACTCATAGATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCTTAACATAATTTTAAATAAAAAAAGAGTAAAATAc                                                                                                                            >  1:364604/1‑140 (MQ=255)
                   tGGTGCTCTTAAATATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGAGTAAATTACtt                                                                                                                          >  1:268402/1‑140 (MQ=255)
                   tGGTGCTCTTAAATATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGAAAAAAAGGGTAAATTACtt                                                                                                                          >  1:161091/1‑140 (MQ=255)
                    ggTGCTCTTAAATATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTa                                                                                                                         >  2:634293/1‑140 (MQ=255)
                     gTGCTATTAAATATTTTGAATTAGTTTTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATTCTACCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTaa                                                                                                                        <  1:334133/140‑1 (MQ=255)
                          ctTAAATATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTCGGGACCGGAAAACATACTTTTTAAGCAAAAAAGGGTAAATTACTTAAGCttt                                                                                                                   >  1:549731/1‑140 (MQ=255)
                          ctTAAATATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCttt                                                                                                                   >  2:386019/1‑140 (MQ=255)
                          ctTAAATATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGAAAAAAAGGGTAAATGACTTAAGAttt                                                                                                                   >  1:336458/1‑140 (MQ=255)
                             aaaTATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAAGGTAAATTACTTAAGCTTTAtt                                                                                                                >  1:579120/1‑140 (MQ=255)
                             aaaTATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACATAAAATATAAATCGAAAAAGAAAAGCCATATAAGATATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTAtt                                                                                                                >  2:271811/1‑140 (MQ=255)
                              aaTATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTAttt                                                                                                               >  2:294982/1‑140 (MQ=255)
                                tatTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGa                                                                                                             >  1:431443/1‑140 (MQ=255)
                                        atttgaatgCAAAGAATGTTTCACTTGTGAAACCGCAAATATCACTCAAATATTTACTAAAAATTTACAAAATAAGAATATCATAACAAACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGaa                                                                                                     <  2:63650/140‑1 (MQ=255)
                                         ttagaattTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGaaa                                                                                                    <  1:131724/140‑1 (MQ=255)
                                           agaattTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAAATTAATTTGAAAAACGaaaaa                                                                                                  >  2:727085/1‑140 (MQ=255)
                                           agaattTAAAGAAAGTTTCATTTGAGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGaaaaa                                                                                                  >  1:487146/1‑140 (MQ=255)
                                           agaaatTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGATAAATTACTTAAGCTTTATTTGAAAAACGaaaaa                                                                                                  >  1:517438/1‑140 (MQ=255)
                                            gaattTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAAt                                                                                                 >  1:487132/1‑140 (MQ=255)
                                                   aagaaagTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTaaa                                                                                          <  1:730850/140‑1 (MQ=255)
                                                     gaaagTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATa                                                                                        >  1:732813/1‑140 (MQ=255)
                                                        ggTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTAAAAAACGAAAAATGTCTAAATacac                                                                                     >  2:316230/2‑140 (MQ=255)
                                                           ttCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTgt                                                                                  >  1:497861/1‑140 (MQ=255)
                                                            tCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATACTATCATAAAATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGATTTATTTGAAAAACGAAATATGTCGAAATACACTgaa                                                                                 >  2:657608/1‑138 (MQ=255)
                                                              aTTTGTGACACCTCAAATATATAAGCTGTAGAGGCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACagtagt                                                                               >  1:754952/1‑140 (MQ=255)
                                                              aTTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTgtagt                                                                               >  2:244484/1‑140 (MQ=255)
                                                                   tgACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTACTAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATATCTAAATACACTGTAGTAacta                                                                          >  2:493080/1‑140 (MQ=255)
                                                                   tgACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAacta                                                                          >  2:579847/1‑140 (MQ=255)
                                                                     aaacatCAACTATAAATCAAACATTATCCAAAAATTTATAAATTAATCATATCATAACATAAAAAAAAAAAAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAactact                                                                        <  2:747689/135‑1 (MQ=255)
                                                                       acCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACttt                                                                      >  1:227173/1‑140 (MQ=255)
                                                                       acCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTAAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACttt                                                                      >  2:22/1‑140 (MQ=255)
                                                                                   aaTCAATTATTGTACAAAAATTTAGAAATTAATACTATCATAACATAAATAAAAAAAAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATa                                                          <  2:449703/140‑1 (MQ=255)
                                                                                   aaTCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATTTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATa                                                          <  1:487840/140‑1 (MQ=255)
                                                                                   aaTCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTATAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATa                                                          <  1:60904/140‑1 (MQ=255)
                                                                                   aaTAAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTATTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATa                                                          <  2:635565/140‑1 (MQ=255)
                                                                                         atatTGTCTAAAAATTTAGAAATTAATAATATCTTAACATAATTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTgg                                                    <  2:456887/140‑1 (MQ=255)
                                                                                         ataatttCTAAAAATTTATAAATTAATAATATCATAACATAAAAAAAAAGAAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTgg                                                    <  2:480479/134‑1 (MQ=255)
                                                                                              gTCTAAAAATTTAGAACTTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACa                                               >  1:452414/1‑140 (MQ=255)
                                                                                                cTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGt                                             <  1:294982/140‑1 (MQ=255)
                                                                                                cTAAAAATATAGAAAGTTATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTACCTCCCATGTCATATTAAGGTTTCAAAATGAATAAAGTGGTTACAGt                                             >  2:533291/1‑140 (MQ=255)
                                                                                                 tAAAAATTTAGAAATTAATAATATCATAACATAAAATAAAAAAAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGtt                                            <  2:431443/140‑1 (MQ=255)
                                                                                                      aTTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGt                                       <  2:497861/140‑1 (MQ=255)
                                                                                                       acttACAAATTAATAATATCCTAACATACAAAAAAAGAAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGt                                       <  2:713/138‑1 (MQ=255)
                                                                                                          taaaaaTTAATAATATCATAACATAAAAAAAAAAAAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTACATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACt                                    <  2:654304/137‑1 (MQ=255)
                                                                                                           aGAAATTAATAATATTATAACATACTTTTAAAGCAAAAGACGGTAACATACGAAATTTTTATTTGAAAAACACAATATGCCTCAATACACCGTAGATACTACTTTAAAAAAGATATAACGGGGTTACAGGTGATCTAcat                                   >  2:123023/1‑138 (MQ=255)
                                                                                                           aGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACtt                                   >  1:600259/1‑140 (MQ=255)
                                                                                                           aGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACtt                                   >  2:424511/1‑140 (MQ=255)
                                                                                                           aGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATATACtt                                   >  1:219521/1‑140 (MQ=255)
                                                                                                                ttAATAATATTATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACTTAGACa                              <  1:296426/140‑1 (MQ=255)
                                                                                                                ttAATAATATTATAACATAATAAAAAAAAAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACTTAGACa                              <  2:504174/140‑1 (MQ=255)
                                                                                                                ttAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACTTAGACa                              <  1:725643/140‑1 (MQ=255)
                                                                                                                          cataacataaaaaaaaaGCAAAATAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCGAAATGAATAAAGTGGTTACAGTTAATGTACTTAGACAGTATAAAAtt                    <  2:475190/126‑1 (MQ=255)
                                                                                                                           aTAACATACTTTTAAAGAAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACTTAGACAGTATAAAATTa                   <  1:193008/140‑1 (MQ=255)
                                                                                                                              aCATACTTTTAAAGCAAAAAAGTGTAATTTACTTAATTTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACTTAGACAGTATAAAATTATGa                <  1:453958/140‑1 (MQ=255)
                                                                                                                                      ttAAAGAAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACTTAGACAGTATAAAATTATGAATCTTTaa        <  2:511531/140‑1 (MQ=255)
                                                                                                                                      ggaaaGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACTTAGACAGTATAAAATTATGAATCTTTaa        <  2:185610/138‑1 (MQ=255)
                                                                                                                                      aaaaaaCAAAAAAAGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACTTAGACAGTATAAAATTATGAATCTTTaa        <  2:78055/138‑1 (MQ=255)
                                                                                                                                         aaGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTATTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACTTAGACAGTATAAAATTATGAATCTTTAAACt     >  1:300175/1‑140 (MQ=255)
                                                                                                                                            cAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACTTAGACAGTATAAAATTATGAATATTTAAACagtg  >  1:685857/1‑140 (MQ=255)
                                                                                                                                            |                                                                                                                                           
TTGAAAATTGGCGAATACTTGGTGCTCTTAAATATTTAGAATTAGAATTTAAAGAAAGTTTCATTTGTGACACCTCAAATATAAATCAAATATTGTCTAAAAATTTAGAAATTAATAATATCATAACATACTTTTAAAGCAAAAAAGGGTAAATTACTTAAGCTTTATTTGAAAAACGAAAAATGTCTAAATACACTGTAGTAACTACTTTTCAAAATGAATAAAGTGGTTACAGTTAATGTACTTAGACAGTATAAAATTATGAATCTTTAAACTGTG  >  CP000730/1056118‑1056396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: