| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 96,144 | A→G | 8.6% | intergenic (+660/+819) | USA300HOU_0093 → / ← USA300HOU_0095 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 96,144 | 0 | A | G | 8.6% | 188.9 / 7.0 | 68 | intergenic (+660/+819) | USA300HOU_0093/USA300HOU_0095 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (36/26); new base G (3/3); total (39/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.21e-01 | |||||||||||
TGAAAATTATGTATTTAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTATGGG > CP000730/96008‑96284 | tggaaaTTATTGATTTAGGTGAAGATTATTTTAGGAAACATAAAACCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGaagaaa < 2:153303/138‑1 (MQ=255) ttATGTATTTAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAata < 2:109565/141‑1 (MQ=255) tATGTATTTAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGTTTGTTGAAGAAAGAAatat < 1:430448/141‑1 (MQ=255) aTGTATTTAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAAtata < 2:317057/141‑1 (MQ=255) aTGTATTTAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAAtata < 2:583131/141‑1 (MQ=255) gTATTTAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAAc > 2:707896/1‑141 (MQ=255) ttAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTc < 1:563493/141‑1 (MQ=255) ttAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTc < 1:648448/141‑1 (MQ=255) tAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGATGAAGAAAGAAATATAACAGTCa > 1:652178/1‑141 (MQ=255) cTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCaatt > 2:398090/1‑141 (MQ=255) cTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCaatt > 1:236682/1‑141 (MQ=255) cTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTATTAAAGAAAGAAATATAACAGGCagtt > 1:649287/1‑141 (MQ=255) aGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCaattataa > 2:132860/1‑141 (MQ=255) gtattTTAGGATACATAAAGTCGGTTCTAACGCTAAAGTGATATTTGCAGCGCCAAAAGATGATT‑TATTTGACGTAGGAAAATATAATAAAGAATTCGAAAAGATGGTTGAAGAAAGAAATATAACAGTCaattttaatta > 2:777099/2‑141 (MQ=255) attTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAattataattata > 2:641531/1‑141 (MQ=255) attTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAataataaatata > 2:752867/1‑141 (MQ=255) aaaCATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCttgtt > 1:1722/1‑141 (MQ=255) cATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGaa > 1:259763/1‑141 (MQ=255) aaaTCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCg > 2:447029/1‑141 (MQ=255) aaTCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGa > 2:266578/1‑141 (MQ=255) cGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGt > 2:276051/1‑141 (MQ=255) gCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCAACGGTGACaaaaaa > 2:306889/1‑141 (MQ=255) gtgATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCt < 1:203281/141‑1 (MQ=255) atatGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAAGCGACGGTGACAAAAAAGTGGCTACAtt < 1:799913/141‑1 (MQ=255) gCAACGCCAAAAGATGCTTAAATCTTATGTA‑TAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGaa < 2:809644/141‑1 (MQ=255) gCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAGAGTGGCTACATTCGaa < 1:481783/141‑1 (MQ=255) gCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGaa < 1:5363/141‑1 (MQ=255) cAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAAc > 2:598358/1‑141 (MQ=255) cAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGCCGACCAAAAAAGGGCTACATTCGacc > 2:487433/1‑139 (MQ=255) cAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAAAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAAc > 2:597110/1‑141 (MQ=255) cAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACTGTGACAAAAAAGTGGCTACATTCGAACATATCa > 1:237275/1‑141 (MQ=255) aaaaGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGCCAAAAAAGTGGCTACATTCGAACATAGCaa > 1:78108/1‑141 (MQ=255) aaaaGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCaa > 2:756743/1‑141 (MQ=255) aaGATGCTT‑TATTTGACGTATGAAAATATAATAAAGAATTAGAAAGGATTGTTGAGGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAg > 1:490299/1‑141 (MQ=255) aaGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAGGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAg > 1:513926/1‑141 (MQ=255) aaGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAGGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAg > 2:712226/1‑141 (MQ=255) aaGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAg > 1:607493/1‑141 (MQ=255) gATGCTT‑TATTTGACGTAGGAAAATATAATAAATAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCATAGCa < 1:550571/141‑1 (MQ=255) gATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCa < 1:99927/141‑1 (MQ=255) cTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGTCAAAAAAGTGGCTACATTCGACCATATCAAAGCATACg < 1:450741/141‑1 (MQ=255) cTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAAAATAGTTGAAATCGAGGATGACAAAAAAATGGTTCCTAGCTAACATATCAAAGCATACg > 2:364662/1‑141 (MQ=255) tt‑tATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGa < 1:310965/141‑1 (MQ=255) aTTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAg > 1:719819/1‑141 (MQ=255) aTTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAg > 1:396075/1‑141 (MQ=255) cGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCACTTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATAAAAGCATACGATAGaaaaaa > 2:159438/1‑140 (MQ=255) gTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATCATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACa < 1:679666/141‑1 (MQ=255) gTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACa < 1:347452/141‑1 (MQ=255) gTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACa < 1:617600/141‑1 (MQ=255) gaGGAAAATATAATAAAGAAGTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTGGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATAGCAAAGCATACGATAGAAAAACaa < 2:763388/140‑1 (MQ=255) ggAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACAGTGAAAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATa < 2:434916/141‑1 (MQ=255) gAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATaa > 2:78713/1‑141 (MQ=255) ataaAGAATTAGAAAGGATTGTTGAAGAAAGAAATATACCAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGCAAAACAATAAGTTATGata > 1:196242/1‑141 (MQ=255) ataaAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGata > 2:365384/1‑141 (MQ=255) ataaAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTAAGata > 2:238426/1‑141 (MQ=255) ataaAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTGAAGata > 1:357416/1‑141 (MQ=255) aaGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGt < 1:766868/141‑1 (MQ=255) aaGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCCTGTGCGTAACGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGt < 1:793576/141‑1 (MQ=255) ttAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACAt > 1:476284/1‑141 (MQ=255) tataagggATTGTAGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATg < 1:702653/135‑1 (MQ=255) tAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATg < 1:464951/141‑1 (MQ=255) aaaaaaCGAATGTCGAAGAAAGAACTATAGCAGTCAATTATAATTATACCCCAGTGGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATg < 1:626800/138‑1 (MQ=255) aTTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAACCGAAGGTGACAAAAAAGTGGCTACAGTCGAACATATCCAAGCACACGAAAGAAAAACAATAAGTTAGGATATGTTTAATATAAaacca > 2:19272/1‑141 (MQ=255) ttgttgAAGAAAGAAATATAACAGCCAATTATAATTATAACCTTGGTGAAATCGACGGTGACAAAAAAGTGGCTACCTCCGCACATATGCAAGCATACGATAAAAAAACAATAAGTTATGATATGTTACATGTAAcaccac < 2:171060/141‑1 (MQ=255) tgttgAGGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACaccacc < 2:513926/141‑1 (MQ=255) tgttgAGGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACaccacc < 2:490299/141‑1 (MQ=255) tgttgAGGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACaccacc < 1:712226/141‑1 (MQ=255) gttgAAGAAAGAAAGATAACAGTCACTCAGGACTATAACCTTGTTGAAATCGACGGTGGCAAGAAAGTGGCTACATTCGCACATATCAAAGCATACGATAGAAAACCAATAAGTTATGATATGTTACATGTAGAACCACCt > 2:336866/1‑141 (MQ=255) ttgAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTa > 2:797924/1‑141 (MQ=255) ttgAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGAGACAAAAAAGTGGCTACATTCGAACATATCACAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTa > 2:446657/1‑141 (MQ=255) gaagaaAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTATg < 2:461154/141‑1 (MQ=255) aaagaaagaAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGAATAAAAAAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTATg < 2:764586/140‑1 (MQ=255) aaagaaagaAATATAACAGTCAATTATAATGATAACCTTATTGAACTCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTATg < 2:329331/140‑1 (MQ=255) aagaaagaAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCAACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTATgg < 1:306889/141‑1 (MQ=255) agaaagaaATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTATggg < 2:607493/141‑1 (MQ=255) | TGAAAATTATGTATTTAGCTGAAGATTATTTTAGGAAACATAAAATCCGTTCTAACGCTAATGTGATATATGCAACGCCAAAAGATGCTT‑TATTTGACGTAGGAAAATATAATAAAGAATTAGAAAGGATTGTTGAAGAAAGAAATATAACAGTCAATTATAATTATAACCTTGTTGAAATCGACGGTGACAAAAAAGTGGCTACATTCGAACATATCAAAGCATACGATAGAAAAACAATAAGTTATGATATGTTACATGTAACACCACCTATGGG > CP000730/96008‑96284 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |