Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 607,884 G→A 100% R209* (CGA→TGA)  USA300HOU_0550 ← deoxynucleoside kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730607,8840GA100.0% 249.4 / ‑6.5 80R209* (CGA→TGA) USA300HOU_0550deoxynucleoside kinase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (39/40);  minor base T (1/0);  total (40/40)
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

TATATGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTCCAGT  >  CP000730/607747‑608021
                                                                                                                                         |                                                                                                                                          
tataTGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGc                                                                                                                                        <  2:659276/141‑1 (MQ=255)
   atGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAAt                                                                                                                                     <  1:232267/141‑1 (MQ=255)
        aatgaatgTATTCGATAAAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGt                                                                                                                                <  2:298951/141‑1 (MQ=255)
         aTTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTACTCTTTTATAGTGTATCTACTTGACGATATGTTTGAATAATTCAAGCAATTTTGtt                                                                                                                               >  2:183252/1‑141 (MQ=255)
            aaTGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATTTGTTTGAATAATTCAAACCATTTTGTTTAt                                                                                                                            >  2:483447/1‑141 (MQ=255)
             aTGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTTTTTAtt                                                                                                                           >  2:531465/1‑140 (MQ=255)
             aTGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATc                                                                                                                           <  1:612105/141‑1 (MQ=255)
              tGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAGTATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTGATCGTGTATCTACTTTTCTATATGTTTGAATAATTCAAGGAATTTTGTTTATCa                                                                                                                          >  1:179793/1‑141 (MQ=255)
               gTATTCGATAGAATTGATAAAATAATCGATAATATCTATTGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCAt                                                                                                                         <  2:320426/141‑1 (MQ=255)
               gTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATATACTTGACAATATTTTTGAATAATTCAAGCAATTTTGTTTATCAt                                                                                                                         >  1:139447/1‑141 (MQ=255)
                   tCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGATTAATTCAAGCAATTTTGTTTATCATAGGa                                                                                                                     >  1:739031/1‑141 (MQ=255)
                   tCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGa                                                                                                                     >  1:410980/1‑141 (MQ=255)
                       aaGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTa                                                                                                                 <  1:233264/140‑1 (MQ=255)
                        aGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATAATAGGATTTaa                                                                                                                >  2:197610/1‑141 (MQ=255)
                        aGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAAACTAACCGCAACGAGGAGAGACGTTTATCGTGTATATACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTaa                                                                                                                >  2:495026/1‑141 (MQ=255)
                             tGATAAAATAATCGATAATATCTATGGAATATATATTTAATATAAATATAAACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGAtt                                                                                                           <  2:496973/141‑1 (MQ=255)
                               aTAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCg                                                                                                         >  2:23700/1‑141 (MQ=255)
                               aTAAAATAATCGATAATATCCATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCGCCTTGTCAATATTTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAATGATTCg                                                                                                         >  1:475345/1‑141 (MQ=255)
                                tAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCgg                                                                                                        <  1:479458/141‑1 (MQ=255)
                                 aaaaTAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCggg                                                                                                       >  1:130545/1‑141 (MQ=255)
                                   aataatCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAATGCTTCGGGGt                                                                                                     >  2:246933/1‑141 (MQ=255)
                                   aataatCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGt                                                                                                     >  1:17032/1‑141 (MQ=255)
                                    ataatCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTc                                                                                                    >  1:421125/1‑141 (MQ=255)
                                     taatCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTcc                                                                                                   >  1:606682/1‑141 (MQ=255)
                                         cGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATCTCTTTCGTCTCCTATCGTGTATCTACTTGTCGCTCTGTTTGAATAATTCAAGAAATTTTGTTTATCATAGGCTTTAAAGGTTCGGGGTCCTTAt                                                                                               >  2:692226/1‑141 (MQ=255)
                                         cGATAATATACTTGGAATATATATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTCGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCTTAGAATTTAAAGATTCGGGGTCCtaag                                                                                               >  2:618046/1‑138 (MQ=255)
                                           ataattTCTATGGAATATACATTGGATATAAACATAGACGCTATGTCTTTAGTCTTTTATCGGGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTCGTTAGTCGGGGTCCTTATgg                                                                                             <  2:273436/141‑1 (MQ=255)
                                           ataataTCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAGGCAATTTTGTTTATCATAGTATTTGAAGATTCGGGGTCCTTATgg                                                                                             >  1:31710/1‑141 (MQ=255)
                                            taataTCTATGGAATATACCTTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAACGATTCGGGTTCCTTATGGa                                                                                            <  2:350994/141‑1 (MQ=255)
                                            taataTCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGa                                                                                            <  2:574265/141‑1 (MQ=255)
                                               tatCAATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATCATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGatat                                                                                         >  1:517606/1‑141 (MQ=255)
                                                agcTATGGAACATACATTGAATATAAACATATACGCTATGTCTTTAGTCCTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATc                                                                                        <  1:20484/139‑1 (MQ=255)
                                                  cTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCat                                                                                      <  1:630879/141‑1 (MQ=255)
                                                    aTGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGTTATCatat                                                                                    >  2:245488/1‑141 (MQ=255)
                                                     tGGACTATACATGGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACGTGTCGATATGTTTGAACAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATAtt                                                                                   <  1:234872/141‑1 (MQ=255)
                                                         atatACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCAtt                                                                               <  1:716622/141‑1 (MQ=255)
                                                           ataCATTGAATATAAACATATACGCTCTGTATTTAGTCTTTTCACGTGTATCTAACTGAAGAAACCTTTGTAAATTTGTATGCGGTAAGGTTTTCATAGGATTTAAACATGCTTGGTCCTAATGGATATCATATTCATTaa                                                                             >  2:752447/1‑141 (MQ=255)
                                                              cATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAAGATTTAAAGATTCGGCGTCCTTATGCATATCATATTCAAGAatat                                                                          >  2:718127/1‑141 (MQ=255)
                                                                ttGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTg                                                                        >  1:73571/1‑141 (MQ=255)
                                                                ttGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTg                                                                        >  2:359693/1‑141 (MQ=255)
                                                                 tGAATATAAACATATACGCTATGTTTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGa                                                                       <  1:469455/141‑1 (MQ=255)
                                                                 tGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGa                                                                       <  2:745953/141‑1 (MQ=255)
                                                                   aaTATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATa                                                                     <  2:136632/141‑1 (MQ=255)
                                                                     tataAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGGATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACg                                                                   <  2:758507/141‑1 (MQ=255)
                                                                      ataAACATATACGCTATGTCTTTAGTCTTTTACCGTGTATCTACTTGTCGATATGTTTGAATGATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGt                                                                  >  1:544879/1‑141 (MQ=255)
                                                                        aaaCATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTAc                                                                <  1:295210/141‑1 (MQ=255)
                                                                         aaCATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACa                                                               <  1:736984/141‑1 (MQ=255)
                                                                           cATATACGCTATGTCTTTAGTCTTTGATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAAc                                                             <  1:575326/141‑1 (MQ=255)
                                                                              ataCGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTgg                                                          <  1:23700/141‑1 (MQ=255)
                                                                                 cGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAATATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACa                                                       <  2:179793/141‑1 (MQ=255)
                                                                                 cGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACaaatagcca                                                       <  2:576079/141‑8 (MQ=255)
                                                                                 cGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACa                                                       <  2:139447/141‑1 (MQ=255)
                                                                                 cGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACa                                                       <  1:427985/141‑1 (MQ=255)
                                                                                 cGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACa                                                       <  1:73056/141‑1 (MQ=255)
                                                                                 cGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATACTGATACGTACAACTGGACa                                                       <  1:566921/141‑1 (MQ=255)
                                                                                 cGCTATGTCTTTAGTCTTTTATCGTGTAACTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCATTATGGATATCATATTCATTAATATTGATACGTACAACTGGACa                                                       <  1:429445/141‑1 (MQ=255)
                                                                                  gCTATGTCTTTAGTCTTTGATCTTGTATGTACTTGTCTATATGTTTGAATTATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACAt                                                      >  2:559281/1‑141 (MQ=255)
                                                                                   cTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATg                                                     <  1:504414/141‑1 (MQ=255)
                                                                                           ttAGTCTTTTATCGTGTATCTACTCGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGCGTCCTTATGGATATCATATTCATTAATATTGTTACGTACAACTGGACATGCATAAAAg                                             >  2:499846/1‑141 (MQ=255)
                                                                                            tAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGc                                            >  2:674422/1‑141 (MQ=255)
                                                                                                 ttttATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGGCCTTATGGATATCATATTCATTAATATTGATACGTACCACTGGACATGCATTAAAGCTATTa                                       >  2:475500/1‑141 (MQ=255)
                                                                                                   ttATCGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACCTGCATTCACGCTATTAAt                                     >  2:207967/1‑141 (MQ=255)
                                                                                                       cGTGTATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCaa                                 >  2:358505/1‑141 (MQ=255)
                                                                                                        gtgtATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAAt                                >  1:641900/1‑141 (MQ=255)
                                                                                                        gtgtATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGCACACATGGACATGCATTCAAGCTATTAATCCAAt                                >  1:707421/1‑141 (MQ=255)
                                                                                                         ttgaTCTACTTGGGGATATGTATGAATAATTTAAGCAATTTTCTTTATCATAGGATTTAAAGAGTCGGGGTCCTTATTGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATc                               <  2:31710/138‑1 (MQ=255)
                                                                                                         tgtATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGTTACGTACAACTGGACATGCATTAAAGCTATTAATCCAATc                               >  2:5263/1‑141 (MQ=255)
                                                                                                          gtATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCg                              >  1:742031/1‑141 (MQ=255)
                                                                                                          gtATCTACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCg                              <  2:142074/141‑1 (MQ=255)
                                                                                                               tACTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATa                         <  2:649956/141‑1 (MQ=255)
                                                                                                                aCTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATTATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAg                        <  1:127493/141‑1 (MQ=255)
                                                                                                                aCTTGTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTCCAGCTGGACATGCATTAAAGCTATTAATCCAATCGTCATAg                        >  1:139061/1‑141 (MQ=255)
                                                                                                                    gTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGtt                    <  1:197279/141‑1 (MQ=255)
                                                                                                                    gTCGATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGtt                    >  2:381873/1‑141 (MQ=255)
                                                                                                                       gATATGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTaa                 <  2:17032/141‑1 (MQ=255)
                                                                                                                           tGTTTGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGGCATGCATTAAATCTATTAATCCAACCGCGATAGGGTTTACATAg             >  2:620842/1‑141 (MQ=255)
                                                                                                                           tGTTTGAACAATTCAAGCAATTTTGTTTATCATAGGATTTAAATATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAg             <  1:483447/141‑1 (MQ=255)
                                                                                                                             tttGAATAATTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTGCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATTCAATCGGCATAGTGTTTCAATAGCt           >  2:741141/1‑141 (MQ=255)
                                                                                                                                 aataatTCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCttttt       <  2:73571/141‑1 (MQ=255)
                                                                                                                                      ttCAAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTCCAGt  <  1:602598/141‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                          
TATATGTGAATTAATGTATTCGATAGAATTGATAAAATAATCGATAATATCTATGGAATATACATTGAATATAAACATATACGCTATGTCTTTAGTCTTTTATCGTGTATCTACTTGTCGATATGTTTGAATAATTCGAGCAATTTTGTTTATCATAGGATTTAAAGATTCGGGGTCCTTATGGATATCATATTCATTAATATTGATACGTACAACTGGACATGCATTAAAGCTATTAATCCAATCGTCATAGCGTTTAAATAGCTTTTTCCAGT  >  CP000730/607747‑608021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: