| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 18,890 | C→G | 93.9% | N182K (AAC→AAG) | USA300HOU_0014 → | DHH subfamily phosphodiesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 18,890 | 0 | C | G | 93.9% | 238.4 / 5.3 | 77 | N182K (AAC→AAG) | USA300HOU_0014 | DHH subfamily phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base C (3/2); new base G (45/27); total (48/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.01e-01 | |||||||||||
TATAATCAGTATCATTTCCAAGTACGTTATTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAACTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCAAAAGATACAGTTCCGATCAATTCGTAGC > CP000730/18753‑19024 | tataATCCGTATCATTTCCAAGTACGTTATTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTAc > 2:679492/1‑141 (MQ=255) ataATCAGCATCATTTTCAAGTACGTTATTCCGAGAATGATCACGTCCTCTATTTCTTTGATATAACTGAACAAGTACCAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACAATCTTTTGAGAGAAGTACg < 2:189360/141‑1 (MQ=255) taATCAGTATCATTTCCAAGTACGTTATTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAGAATTCTAAACCAATCATTACGAAATTATTTTTAGATAAGTACGa > 2:443155/1‑141 (MQ=255) aaagcAGTATCATTTCCAAGTACGTTATTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGa < 2:13394/137‑1 (MQ=255) aaaTCAGTATCATTTCCAAGTACGTTATTCTGAGAATGATCACTGCCTCTATCTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGa < 2:13340/140‑1 (MQ=255) aTCAGTATCATTTCTCAGTTCGGTATTCTGAGAATGATCACTGCATCTTTTTTCTTGATATAACTGAACAAGTACAAACAAATGAAGTTTATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATg < 2:181102/141‑1 (MQ=255) tCAGTATCATTTCCAAGTACGTTATTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATga < 1:790733/141‑1 (MQ=255) tCAGTATCATTTCCAAGTACGTTATTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATga < 1:95698/141‑1 (MQ=255) aGTATCATTTCCAAGTACGTTATTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGCCATTATTTTTAGATAAGTACGATgaga > 1:377450/1‑141 (MQ=255) aGTATCATTTCCAAGTACGTTATTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATgaga > 1:445723/1‑141 (MQ=255) tttCCAAGTACGTTATTCTGAGGCTAAGCACGTCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCa > 1:206983/1‑141 (MQ=255) tttCCAAGTACGTTATTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAGAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCa > 2:851551/1‑141 (MQ=255) tttCCAAGTACGTTATTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTACACCCATAATCACGACATTATCTTTAGCTAACTACGATGAAATTACGCa > 2:590101/1‑141 (MQ=255) tttCCAAGTACGTTATTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCa > 2:359730/1‑141 (MQ=255) cAAGTCCGTTATAATGAGAATGATCGCTGCCTCTATTTCTTTAATATAACTGAACAAGTCCAAACAAATGAACTATATGAAAAGTCTAAACCAATCAGAGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAat < 2:279056/141‑1 (MQ=255) aaGTACGTTATTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAata > 1:407645/1‑141 (MQ=255) aTTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGACCTATACGACAATTCTAAACCAATCATTGCGACATTATTTTTACATAAGTACGATAAGATTACGCAAAATAGGAAGGATa > 2:3849/1‑141 (MQ=255) aTTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACGGAACAAGTACAGACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATa > 2:651282/1‑141 (MQ=255) cTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGc < 2:175175/141‑1 (MQ=255) gagaATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATAAGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGGAGCGATTACGCAAAAAATGAGTGAAACGCaa > 1:153327/1‑140 (MQ=255) aTGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATATGCAACGtt > 1:436835/1‑141 (MQ=255) tCACTGCGTCTATTTCTTTGATATAACCGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACCATGAGAGGAGGCAAAATATGAATGATACGCAGCGTTCGGa < 1:122368/141‑1 (MQ=255) tCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGa < 1:726367/141‑1 (MQ=255) tCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGa > 2:335868/1‑141 (MQ=255) tCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGa > 1:24179/1‑141 (MQ=255) cACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGaa > 1:275334/1‑141 (MQ=255) cACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGaa > 2:210847/1‑141 (MQ=255) gCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAACTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCa < 2:409395/141‑1 (MQ=255) ctATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGCTTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTc > 1:453703/1‑141 (MQ=255) ctATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTc > 1:499799/1‑141 (MQ=255) aTTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCaa > 2:386046/1‑141 (MQ=255) tCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATgg > 1:127937/1‑141 (MQ=255) cTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGt > 2:467546/1‑141 (MQ=255) gATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAAcg < 1:469563/141‑1 (MQ=255) atatAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAAcgc > 2:653382/1‑141 (MQ=255) ctaACTGAACAAGGACAAACAAATGAACTATATGAAATTTCTAAACCAAGCATTGCGACCTTATTTTTGGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCgt < 1:114695/140‑1 (MQ=255) aCTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAAACAATCATTGCTACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTc > 2:611122/1‑141 (MQ=255) aaGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTc > 1:305099/1‑141 (MQ=255) aaGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGAAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTc > 1:415627/1‑141 (MQ=255) tACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGAt > 1:343934/1‑141 (MQ=255) acaaacaaATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCCAAATATGAATGATACGCAGCGTTCGGAAATAAACTCAATGGTAACGCGTGTCATTAGTCGATg > 1:337556/1‑141 (MQ=255) acaaacaaATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATg > 1:433317/1‑141 (MQ=255) caaacaaaTGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATgg < 1:306209/141‑1 (MQ=255) aaaaaaaaGGAACTATATGAAAATTCTAAACCAAGCATTGCGACATTAGTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGCAAATCAACTCAATGGTAACGCTTGTCATTAGTCGATgg < 1:483199/140‑1 (MQ=255) aaacaaaTGAATTATATGAACATTCTAAACCAATCATTGCGACATTATTTTTAGAGAAGTACGATGAGATTACGCAAAACATGAATGATACGCAGCGTTCGGAAATCAACTCAATGTTAACGCGTGTCATTAGTCGATggg < 1:554873/141‑1 (MQ=255) aacaaaTGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAACTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGc < 2:37164/141‑1 (MQ=255) accaaTGAACTATATGAAAATTCGAAACCAATCATTGCGACCTTATTTTTAGATAAGTACCATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCa < 2:362477/138‑1 (MQ=255) aaaTGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAAc > 1:358901/1‑141 (MQ=255) aTGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATGAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCGACTg > 1:501542/1‑141 (MQ=255) aTGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGGTTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAGCTCAATGGTAACGCGTGTCATTAGTCGATGGGCGACTg > 1:499449/1‑141 (MQ=255) aTGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTg < 2:499799/141‑1 (MQ=255) aTGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTg > 2:574071/1‑141 (MQ=255) aTGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAACATGAGTGATACGAAGCGCTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAAcgg > 1:114703/1‑139 (MQ=255) gAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAg < 1:82314/141‑1 (MQ=255) gAACTATAGTAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGACAGGAACGCAGGGCTCGGAAATCATATACCTACAAACGCGTGTCATTAGTCGCTGCGCATTTGAg < 2:610768/141‑1 (MQ=255) aCTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCCAAATATGAATGATAGGCAGCGTGCGGAAATCAACTCAATGGTAACGCGGGTCATTAGTCGATGGGCAACTGAGta > 1:162119/1‑141 (MQ=255) aCTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAGTATGAATGATACGCGGGTAGCGATAATCAACTCAATGGTAACGAGTGTGATTAGTCGATGGGCAACTGAGta > 1:162629/1‑141 (MQ=255) aCTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGta > 2:775805/1‑141 (MQ=255) cTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGtat < 2:445723/141‑1 (MQ=255) atatGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGAGGGTCATTAATCGATGGGCAACTGAGTataa > 1:398010/1‑141 (MQ=255) gAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAatata > 2:701914/1‑141 (MQ=255) cTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCa > 1:810241/1‑141 (MQ=255) cTAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCa < 1:359730/141‑1 (MQ=255) tAAACCAATCATTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAAAGGTAAAGAGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCaa > 2:82676/1‑141 (MQ=255) aTCATTGCGACATTATTTTTAGATAACTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGGCGATGGGAAACGGAGCAGAATCTATTTTTCAACAGAGAc > 2:775170/1‑141 (MQ=255) tCATTGCGACATTATTTTTAGATAACTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCAAAAGATACa > 1:186822/1‑141 (MQ=255) taTTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCAAAAGATACAg < 2:519836/140‑1 (MQ=255) cATTGCGGCATTTTTTTTAGATAAGTATGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCAAAAGATACAg < 2:88872/141‑1 (MQ=255) aTTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCAAAAGATACAGt > 1:740948/1‑141 (MQ=255) aTTGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCAAAAGATACAGt < 2:821696/141‑1 (MQ=255) tGCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCAAAAGATACAGGTc > 1:59379/1‑141 (MQ=255) gCGACATTATTTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCAAAAGATACAGTTcc < 1:386046/141‑1 (MQ=255) attattTTTAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAGTGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCAAAAGATACGGTGCCGATCa > 1:789627/1‑141 (MQ=255) ttttAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCAAAAGATACAGTTCCGATCAATTCg < 1:735782/141‑1 (MQ=255) ttAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAGCTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCAAAAGATACAGTTCCGATCAATTCGTa > 1:216294/1‑141 (MQ=255) ttAGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCAAAAGATACAGTTCCGATCAATTCGTa > 1:456904/1‑141 (MQ=255) aGATAAGTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTCCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCAAAAGATACAGTTCCGATCAATTCGTAGc < 2:81113/141‑1 (MQ=255) | TATAATCAGTATCATTTCCAAGTACGTTATTCTGAGAATGATCACTGCCTCTATTTCTTTGATATAACTGAACAAGTACAAACAAATGAACTATATGAAAATTCTAAACCAATCATTGCGACATTATTTTTAGATAACTACGATGAGATTACGCAAAATATGAATGATACGCAGCGTTCGGAAATCAACTCAATGGTAACGCGTGTCATTAGTCGATGGGCAACTGAGTATAATATATTTTTCAAAAGATACAGTTCCGATCAATTCGTAGC > CP000730/18753‑19024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |