| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 2,679,725 | G→A | 100% | W70* (TGG→TAG) | USA300HOU_2536 → | possible secretory antigen |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 2,679,725 | 0 | G | A | 100.0% | 234.0 / ‑6.5 | 79 | W70* (TGG→TAG) | USA300HOU_2536 | possible secretory antigen |
| Reads supporting (aligned to +/- strand): ref base G (0/2); major base A (35/39); minor base C (2/1); total (37/42) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
CAATCCGTCGAACAAACGCATCAATCGCATGCCGCAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTGGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACGGTAGTATTAAA > CP000730/2679589‑2679858 | cAATCCGTCGAACAAACGCATCAATCGCATGCCGCAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTAt < 2:691133/141‑1 (MQ=255) aaTCCGTCGAACAAACGCATCAATCGCATGCCGCAGTTAATTATTATAGTAAAAACCCATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTAtt < 1:497399/141‑1 (MQ=255) tCCGTCGAACAAACGCATCAATCGCACGCCCCAGCTAAAAATCATAGTCAAAAACAATGTCACCGCAGGGCCACTCAACGGAGCGCACAAGTCTTTAAACCCGTATCTAATAGATGGGGCAACGCTAAAAATTAGTATTAc > 2:856186/1‑141 (MQ=255) cGTCGAACAAACGCCTCAATCGCATGCCGCAGTTCATTATTAAAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCTCAAGTCGGTAAACATGTTACTAATAGCTAGGGCATGGCTAAAACTTCGTATTATaa > 2:176222/1‑141 (MQ=255) cGTCGAACAAACGCATCAATCGCATGCCGCAGTTCATTATTATAGTAAAAACCAATGTACATGGTGGGCCTTTAAACTTCGCGCACCAGACGGTAAACCTGTTTCTAATAGATGGGACAATGCTAGAAATTAGTATTACaa > 2:123107/1‑141 (MQ=255) cGTCGAACAAACGCATCAATCGCATGCCGCAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACaa > 1:683528/1‑141 (MQ=255) tCGAACAAACGCATCAATCGCATGCCGCAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGAATTTCAATg > 2:60347/1‑141 (MQ=255) cAAACGCATCAATCGCATGCCGCAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTAGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGt < 2:22556/141‑1 (MQ=255) aaaaaGCAGCAGTCGCATGCCGCAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGt < 2:779495/140‑1 (MQ=255) aCGCATCAATCGCATGCCGCAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTaaa < 1:627920/141‑1 (MQ=255) aCGCATCAATCGCATGCCGCAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTaaa < 1:627865/141‑1 (MQ=255) ccATCAATCGCATGCCTCAGTTAATTATTATAGTAAAAACCAATTTACATGGGGTGCATTTAAACGTCGCGCACAATTCGTTAAACCTTTTTCTAATACATGTGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATc < 2:66719/140‑1 (MQ=255) ctCAATCGCATGCCGCAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCaa < 2:331977/140‑1 (MQ=255) aTCAATCGCATGCCGCAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCaa < 1:544846/141‑1 (MQ=255) aTCAATCGCATGCCGCAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCaa < 1:23994/141‑1 (MQ=255) tCGCATGGCGCAGTTAATGATTAAAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATTGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAatat < 1:227717/141‑1 (MQ=255) gCATGCCGCAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTGTTACAATGAACGTAAATCAAAATATGc > 1:253759/1‑141 (MQ=255) gCATGCCGCAGTTAATGAGTAGAGTAAAAACGACAGTACATGGGGGGCATTTAAAAGTGGGGCCCAAGTCCGGAATGATGTATCCAGTAGATGGGGCAAGACTAGAAATTAGTATTACAATGCACGTAAAGCAAAATATgg > 2:20650/1‑140 (MQ=255) tccGCAGTTAATTATTATAGTAAAAACCAATGTACATGGTTGGCAGTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGAGGCAATGCTAAAAATTGGTATTACTATGCACGTAAATCAAAATATGCGACt < 2:284967/140‑1 (MQ=255) ccGCAGTTAATTATTATAGTAAAAACCAAAGTACATGGTGGGCATTTAAACGACGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATACGACTg > 2:681411/1‑141 (MQ=255) cGCAGTTAATTATTATAATAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTgg < 2:347488/141‑1 (MQ=255) cAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTTAATCAAAATATGCGACTGGTc < 1:449508/141‑1 (MQ=255) cAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTc < 1:93666/141‑1 (MQ=255) aGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCg < 2:730022/141‑1 (MQ=255) ttattaTAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTCGTATTACAATGGACGTAAATCAAAATATGCGACTGGTCGTACAcc > 1:585026/1‑141 (MQ=255) attatAGCCACAACCAATGTACCGGGTGGGCAGTTAAACGTCGCGGACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCaa < 2:19596/141‑1 (MQ=255) tataGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGa > 1:388732/1‑141 (MQ=255) aGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGaaaa < 2:453974/141‑1 (MQ=255) aGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACAAAGaaaa > 2:20098/1‑141 (MQ=255) aaaaCCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTg < 2:600786/141‑1 (MQ=255) aaTGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCa < 2:683528/141‑1 (MQ=255) aaTGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCa > 1:800588/1‑141 (MQ=255) aTGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCAt > 1:300276/1‑141 (MQ=255) aTGTACATGGTGGGCATTTAAACGTCGCGAAAAAGTCAGTAAACCTATTTCTAATAGATGGGGCAATGCTAAAAATTAGTCTTTTTGTGTATAAATTTTAAAATATTCGACTGGTCGTACACCAAGAAAATTTGATGTcca > 1:239917/1‑139 (MQ=255) tACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTACACCTGTTCCTAGTAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCa < 1:280709/141‑1 (MQ=255) tggtggGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCa > 1:602562/1‑141 (MQ=255) ggttgGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCaa < 1:191170/141‑1 (MQ=255) gCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTGGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCa < 1:211200/141‑1 (MQ=255) gCATCTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCa > 1:588054/1‑141 (MQ=255) cATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAg < 1:509871/141‑1 (MQ=255) ttAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACAGCCGGat > 2:764788/1‑141 (MQ=255) aaCGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCGGGagagt > 1:154331/1‑137 (MQ=255) aCGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGAtatta < 2:552593/141‑1 (MQ=255) gTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGAAATCAACTGCAGAATCATATg > 2:99870/1‑141 (MQ=255) cgcgCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCACTGCGCTTAATGAGTACAACCATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCGGTGCTGCACTCACCTGCAGCACATTATGGa > 2:745997/1‑141 (MQ=255) gcACGAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTAATACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACag > 2:526693/1‑140 (MQ=255) gcACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACAt > 2:567181/1‑141 (MQ=255) acaAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGt < 1:532832/141‑1 (MQ=255) acaAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGt < 1:749757/141‑1 (MQ=255) acaAGTCGGTAAACCTGTTTCTAATAGAGGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCACGATATTATGGACATGt < 1:430550/141‑1 (MQ=255) caAGTCGGTAAACCTGTTCCTAAGAGATGGGGCAATGCTAAAAATTAGCATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTc < 2:99452/141‑1 (MQ=255) aGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGc < 1:221825/141‑1 (MQ=255) cGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAgt > 1:37432/1‑141 (MQ=255) cGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGAAATTATGGACATGTCGCatt > 2:442873/1‑139 (MQ=255) gggaacccTGTTTCTAATAGATGGGGCAATGCTAAAACATACAACTGTAAACCACGTAAATCAAAATATGCGACTGGGCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAgtt < 1:280289/135‑1 (MQ=255) gTATACCTGTTTCTAATAGAGGGGGTAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAATTATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGGAATCAACTGCAGGATATTATGGACATGTCGCAgttg < 1:681411/141‑1 (MQ=255) gTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAgttg < 1:45057/141‑1 (MQ=255) tAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAACTTAGCAATCATGCAATCAACTGCAGGAAATAATGAACATGTAGGAgtatt > 2:635732/1‑138 (MQ=255) ccTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGaa > 1:694261/1‑141 (MQ=255) ccTGTTTCTAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGGTGTTGaa > 2:597525/1‑141 (MQ=255) tAATAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGtata < 1:711247/141‑1 (MQ=255) aaTAGATGGTGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATTCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGtatat < 2:417638/141‑1 (MQ=255) aaTAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGtatat < 2:417582/141‑1 (MQ=255) aTAGATGGGGCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTCCTGTCATGCAATCCACTGCAGGATATTATGGAACTCTCCCAGTTGTTGCACAAGtatata > 2:46913/1‑141 (MQ=255) ggggCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGAAATTATGGACATGTCGCAATTGTTGAAAAAGTAAATaaaaaag > 2:805792/1‑139 (MQ=255) gggCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACgg > 1:296348/1‑141 (MQ=255) gggCAATGCTAAAAACTAGTATTACGATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACgg > 1:432694/1‑141 (MQ=255) gggaaagCTAAAAATTAGGATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACGgt < 1:98358/135‑1 (MQ=255) ggCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCGTGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACGgt > 1:282613/1‑141 (MQ=255) ggCAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACGgt > 2:550782/1‑141 (MQ=255) ggCAAAGCTAACAATTCGCATTATAATGCACGTAAACCAAAATCTGCGTCTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAGAAACGgt < 1:178915/141‑1 (MQ=255) cAATGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACGgtag > 1:446471/1‑141 (MQ=255) aaTGCTAAACATTAGTATTACAATGCACGTAAATCAACATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACGgtagt < 1:20650/141‑1 (MQ=255) tGCTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACGGTAGTAt < 2:388732/141‑1 (MQ=255) cTAAAAATTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACGGTAGTATTa < 2:275743/141‑1 (MQ=255) aaaaaaTTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAACAAAATTTGCTGGCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACGGTAGTATTaa < 2:55760/140‑1 (MQ=255) aaaaaTTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACGGTAGTATTaaa > 1:98463/1‑141 (MQ=255) aaaaaTTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACGGTAGTATTaaa > 2:371291/1‑141 (MQ=255) aaaaaTTAGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACGGTAGTATTaaa > 1:98384/1‑141 (MQ=255) | CAATCCGTCGAACAAACGCATCAATCGCATGCCGCAGTTAATTATTATAGTAAAAACCAATGTACATGGTGGGCATTTAAACGTCGCGCACAAGTCGGTAAACCTGTTTCTAATAGATGGGGCAATGCTAAAAATTGGTATTACAATGCACGTAAATCAAAATATGCGACTGGTCGTACACCAAGAAAATTTGCTGTCATGCAATCAACTGCAGGATATTATGGACATGTCGCAGTTGTTGAACAAGTATATAAAAACGGTAGTATTAAA > CP000730/2679589‑2679858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |