Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 2,279,705 G→A 100% intergenic (+1373/+6659) mtlD → / ← glmM mannitol‑1‑phosphate 5‑dehydrogenase/phosphoglucosamine mutase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007302,279,7050GA100.0% 178.4 / ‑6.5 69intergenic (+1373/+6659)mtlD/glmMmannitol‑1‑phosphate 5‑dehydrogenase/phosphoglucosamine mutase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (33/34);  minor base C (0/1);  total (33/36)
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

TGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTGCTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGC  >  CP000730/2279569‑2279838
                                                                                                                                         |                                                                                                                                      
tgtgCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACtg                                                                                                                                     <  2:450492/140‑1 (MQ=255)
  tgCGGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACtgtt                                                                                                                                   <  2:483002/140‑1 (MQ=255)
     cGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTgttgtt                                                                                                                                >  1:376748/1‑140 (MQ=255)
         attaGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCTTTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCAc                                                                                                                            <  1:599356/140‑1 (MQ=255)
         attaGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGTATCTGCATTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCAc                                                                                                                            <  1:465144/140‑1 (MQ=255)
         attaGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCAc                                                                                                                            <  2:661985/140‑1 (MQ=255)
             gTTGATTCTACTTCTGGTTTACTAGTTACACCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTCGAATTGTTATTTGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGt                                                                                                                        <  1:498106/140‑1 (MQ=255)
              ttGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGATTGTTTTTAGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGtt                                                                                                                       >  1:422013/1‑140 (MQ=255)
              ttGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATCCATCTACACTAGAATTGTTATTAGCTTGCGATTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGtt                                                                                                                       >  1:587521/1‑140 (MQ=255)
                   tCTAGTTCTGGTTTACTAGTTACATCGTTATCCATTTTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGc                                                                                                                  <  2:393594/140‑1 (MQ=255)
                     tactacTGGTTTGCTAGTTACATCGCTATCCATTGTCGGACTGTTTCTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCAACATCACTTGCTGATGTTACTGTTGTTTGACCTGTTGCCGCAt                                                                                                                >  1:470086/1‑140 (MQ=255)
                     tACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAAAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCAt                                                                                                                >  1:365239/1‑140 (MQ=255)
                       cTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATAATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCa                                                                                                              >  1:128431/1‑140 (MQ=255)
                           tGGTTTACTAGTTACATTGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACTCTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACGGTTGTTTCACCTGTTGCCGCATCACtat                                                                                                          <  1:127192/140‑1 (MQ=255)
                           tGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATTCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCTTCACtat                                                                                                          >  1:243800/1‑140 (MQ=255)
                           tGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACtat                                                                                                          >  2:155123/1‑140 (MQ=255)
                           tGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATAACtat                                                                                                          >  1:243953/1‑140 (MQ=255)
                            ggTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTAAACTAGCATTGTTATTAGCTGGCGGATTAGCATTGGCATCATCAGTTGCTGATGTTACTGTTGTTTGACCTGTTGCCGCATCACtatt                                                                                                         >  1:461028/1‑140 (MQ=255)
                                tgcgaGTTAGATCGTTATCCATTTTCGTGCTTGTTGTTTTATCATCTACTCTTGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTAGTAttt                                                                                                     <  2:339299/136‑1 (MQ=255)
                                 aCTAGTTACATCGTTATCCGTTGTCGGACTGTTTGTTGATGCATGTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTg                                                                                                    >  1:364991/1‑140 (MQ=255)
                                 aCTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACAAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTg                                                                                                    >  1:231796/1‑140 (MQ=255)
                                           tCGTTATCCATTGTCGGACTGTTTGTTGATACATATACAATAGAATTGTTATTAGATTGAGGTTTATCTTTTGCATCATAAGTTCATGATGGGACGGTTTTTTCACCTGTGGCCGCATCACTATTATTTGGTGTTGTCgg                                                                                          >  2:157253/1‑140 (MQ=255)
                                             gTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTTTCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGgag                                                                                        <  1:64996/140‑1 (MQ=255)
                                             gTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGgag                                                                                        <  1:612229/140‑1 (MQ=255)
                                                  ccATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCg                                                                                   >  2:574407/1‑140 (MQ=255)
                                                  ccATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCg                                                                                   >  1:254945/1‑140 (MQ=255)
                                                    atgttcgggttgtttgtaGATGCATCTACACTAGGATTGTTAGTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTc                                                                                 <  2:393488/130‑1 (MQ=255)
                                                     ttGTCGGACTGTTTGTTGCTGCATCTACACTTGAATTGTTATTAGCTTGCGGTTTTTCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCt                                                                                <  2:509548/140‑1 (MQ=255)
                                                       gTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCGTCGCTATTATTTGGTGTTGTCGGAGAAGCGTCTGc                                                                              >  2:15877/1‑140 (MQ=255)
                                                       gTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACGATTATTTGGTGTTGTCGGAGAAGCGTCTGc                                                                              >  1:256342/1‑140 (MQ=255)
                                                          ggACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTCTTATTTGGTGTTGTCGGAGAAGCTTCGGCttt                                                                           >  2:175413/1‑140 (MQ=255)
                                                          ggACTGTTTGTTGATGCAAATACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTACCCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAACGACTgacct                                                                           >  2:289381/1‑136 (MQ=255)
                                                           gACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTg                                                                          <  1:535978/140‑1 (MQ=255)
                                                           gACGGTTTGTTGTTGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTg                                                                          <  2:372609/140‑1 (MQ=255)
                                                           gACCGTTTGTTGAAGCATCTACACTAACATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATAATTTGGAGTTGTCGGAGAAGCGTCTGCTTTg                                                                          <  1:209178/140‑1 (MQ=255)
                                                            aCTTTTTGTTGATTCATCTATACTAGTATTTTTTTTAGTTTGCTGTTTATCTTTTGCATCTTCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGc                                                                         <  1:124762/140‑1 (MQ=255)
                                                             cTGTTTGTTGATGCATCTTCACTAGAATTGTTATTAGCTTGCGGTTTATCCTTTGCATAATCAGTTACTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGACTGCTTTGcc                                                                        >  1:249960/1‑140 (MQ=255)
                                                               gttttttGATGCATCTACACTAGAATTGTTATTAGCTTGCTGTTTGTCATTTGCATCATCAGTTGCTGATGTTACTGTTGTGTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCAt                                                                      <  1:299529/140‑1 (MQ=255)
                                                                tttgttGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGAGGAAGCGTCTGCTTTGCCAtt                                                                     >  2:415938/1‑140 (MQ=255)
                                                                  tgttgATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTATTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAg                                                                   >  1:230063/1‑140 (MQ=255)
                                                                   tttgATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGc                                                                  <  2:227076/139‑1 (MQ=255)
                                                                   gttgATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGc                                                                  <  2:376748/140‑1 (MQ=255)
                                                                         gCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTgtcgt                                                            >  2:414364/1‑140 (MQ=255)
                                                                         gCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTgtcgt                                                            >  2:612339/1‑140 (MQ=255)
                                                                         gCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCACTAGCTgtcgt                                                            >  2:271909/1‑140 (MQ=255)
                                                                             cTACACTAGAATTGTTATTAGCTTGCGGTTTATCATATGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGATACGGCATCACCATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCa                                                        >  1:484569/1‑140 (MQ=255)
                                                                                 acTTGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATa                                                   <  1:379468/140‑1 (MQ=255)
                                                                                 acTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATAACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCAGTCGTCTCAGATa                                                   <  1:639140/140‑1 (MQ=255)
                                                                                  cTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATAc                                                  <  1:388850/140‑1 (MQ=255)
                                                                                       aTTGTTATTAGCTTGCGGTTTATCTTTTGCATTATTAGTTGCTGTTGTTAATGTTGTTTCAGATGTTGCCGCATCACTATTATTTGGTGTTGTGGGGGAAGGGTCTGCTTTGCCATTAGCTGTGGTTTCTGATAGGttgg                                             >  1:12932/1‑138 (MQ=255)
                                                                                            tattaGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGt                                        >  2:293910/1‑140 (MQ=255)
                                                                                              ttaGCTTACGGATTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTTACCTGTTGCCGCATCTCTATTATTTGGTGTTTTCGGATAAGCGCATGCTTTGCCATTAGCTGTCGTTTCAGATACGTTAGTTTGttc                                      >  2:244836/1‑138 (MQ=255)
                                                                                                tggttGCGGGTTATCATTTGCATCATCAGTTACTGATGTCAGTTTTTGTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTTGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAg                                    <  2:138610/137‑1 (MQ=255)
                                                                                                       ggTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTc                             >  1:130655/1‑140 (MQ=255)
                                                                                                          ttATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATAACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTgg                          >  1:34575/1‑140 (MQ=255)
                                                                                                           tATCATTTGCATCATCAGCTGCATGCTGGACTGTTGTTTCACCTGTTGCCGCATCACAATTATTTGGAGTAGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATATTCTGgt                         >  1:160035/1‑140 (MQ=255)
                                                                                                               aTTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCAGCATTACTATTATTTGGTGTTGTCGGAGCAGAGCCGGCTGAGGGTTTAGTTGTCGTAAAGAGCACGTTAGGTTGTCCAGTATTTTCGGGTGTTg                     <  2:470086/140‑1 (MQ=255)
                                                                                                                tttGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGc                    <  1:42297/140‑1 (MQ=255)
                                                                                                                   gCATCCTCAGTTGCTGATGTTATTGTTGTTTCACTGGTTGCCTCCTCCCGATTATTTGGTTTTGTCGGAGAAGCTCCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCAtt                 <  2:202784/140‑1 (MQ=255)
                                                                                                                    catcctCTGGTGCTGATGTTTCTGTGGTTTCCCCTGTTGCCGCATCACTGTTATTTGGTGTTGTCGGAGTAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTa                <  2:587521/140‑1 (MQ=255)
                                                                                                                     cgtcattctgtggtGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTa                <  2:422013/127‑1 (MQ=255)
                                                                                                                        atcaGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCAt            >  1:288551/1‑140 (MQ=255)
                                                                                                                         tcaGTTGCTTATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTTCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCAtt           <  1:171411/140‑1 (MQ=255)
                                                                                                                           aGTTGCTGATGTTACTGTTGTTTCAGCTGTGGTCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGTTTTGCCATTAGCTGTCGTCTCAGAGACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTg         <  1:635154/140‑1 (MQ=255)
                                                                                                                              tGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAAt      <  2:652206/140‑1 (MQ=255)
                                                                                                                               gCTTATTTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGTCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAAtt     <  1:257967/140‑1 (MQ=255)
                                                                                                                               gCTTATGTTACTGTTGTTTCACCTTTTGCCGCAGCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAAtt     <  1:392008/140‑1 (MQ=255)
                                                                                                                                   gctGTTACGGTTGTTTCACCTGTTGCCGCATCCCTATTTTTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAACTTGc  <  1:452938/138‑1 (MQ=255)
                                                                                                                                   gATGTTCCTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGCTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGc  <  2:602648/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                      
TGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTGCTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGC  >  CP000730/2279569‑2279838

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: