Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP00073035,9700TC60.0% 371.3 / inf 614E194E (GAA→GAG) tpnIS431mec transposase
Reads supporting (aligned to +/- strand):  ref base T (121/122);  new base C (177/188);  total (300/314)
Fisher's exact test for biased strand distribution p-value = 8.04e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.99e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 616 total aligned reads displayed.

CACTAATTTATCATGTCAGTGTTCGCTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGGTTTAAGTTTAAAA  >  CP000730/35851‑36108
                                                                                                                       |                                                                                                                                           
                cAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATAc                                                                                                       <  1:604615/141‑1 (MQ=11)
                cAGTGTTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCGTTTAAAGTATTCTTTGCTGTATTGATAc                                                                                                       >  1:644346/1‑141 (MQ=2)
                cAGTGTTCGCTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATAc                                                                                                       <  1:649372/141‑1 (MQ=11)
                  gtgtTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACtt                                                                                                     >  1:271637/1‑141 (MQ=255)
                  gtgtTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACtt                                                                                                     >  1:925985/1‑141 (MQ=17)
                  gtgtTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACtt                                                                                                     >  1:472133/1‑141 (MQ=17)
                   tgtTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTTTATAGAGAGTAAATACAT‑TCAATACCTTTTAAAGGATTTTTTGCCGTTTTGATACttt                                                                                                    >  1:628928/1‑141 (MQ=11)
                    gtTCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTg                                                                                                   >  1:263122/1‑141 (MQ=255)
                     ttCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGa                                                                                                  >  1:247653/1‑141 (MQ=17)
                     ttCGTTTAACCTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAG‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGa                                                                                                  <  1:157526/141‑1 (MQ=11)
                      tCGTTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGAt                                                                                                 <  1:385030/141‑1 (MQ=11)
                       cgtttAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGCTACttggtta                                                                                                >  1:493374/4‑136 (MQ=11)
                       cgtttAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATa                                                                                                >  1:657047/4‑141 (MQ=255)
                        gtttAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGGAGTTGGTCGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATAc                                                                                               <  1:213749/139‑1 (MQ=11)
                         tttAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATatc                                                                                              >  1:526754/2‑139 (MQ=255)
                         tttAACTTGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATatc                                                                                              <  1:741655/140‑3 (MQ=255)
                         cTTAACGTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATAcc                                                                                              <  1:756344/141‑1 (MQ=17)
                           tAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCtt                                                                                            >  1:205022/1‑141 (MQ=17)
                           tAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCtt                                                                                            <  1:29210/141‑1 (MQ=17)
                           tAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCtt                                                                                            <  1:903984/141‑1 (MQ=17)
                           tAACTTGCTAGCATGATGCTAATTTCGTGGAATCGCGAAGATCCGGAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCtt                                                                                            <  1:170866/141‑1 (MQ=11)
                               ttGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGtct                                                                                        <  1:791085/141‑1 (MQ=17)
                                tGCTAGCATGATGCTAATTTCTTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGtctt                                                                                       <  1:130480/141‑1 (MQ=17)
                                tGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGtctt                                                                                       <  1:438423/141‑1 (MQ=11)
                                tGCTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGtctt                                                                                       <  1:283377/141‑1 (MQ=11)
                                tGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGtctt                                                                                       <  1:376914/141‑1 (MQ=32)
                                  cTAGGATGACGCTAATTCCGTTGCATGGGGCAAACCCGTAGATCTGAAGAGACCTACGGTTCTTTGTATATAGGGCCTAAATACAT‑TCAACACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGtctttc                                                                                     <  1:308887/141‑1 (MQ=11)
                                  cTAGCATGATGCTAATTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGtctttc                                                                                     <  1:151826/141‑1 (MQ=11)
                                   tagcactacgCTAATTTCGGGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTGTGCTGTATTGATACTTGGATACCTTGtctttct                                                                                    <  1:641103/132‑1 (MQ=11)
                                     gCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTa                                                                                  >  1:721230/1‑141 (MQ=32)
                                     gCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCATGTCTTTCTTa                                                                                  >  1:146605/1‑141 (MQ=17)
                                     gCATGATGCTAATTGCGTGGCATGGCGAAAATTCGGAGGTCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAGATACAC‑TCAATACCTTTTAAAGTGTTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTa                                                                                  >  1:485169/1‑141 (MQ=11)
                                          atgCTAATTTCGCGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTCTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTa                                                                             <  1:930429/141‑1 (MQ=11)
                                              tAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAatat                                                                         <  1:33875/141‑1 (MQ=25)
                                               aaTTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATg                                                                        >  1:44629/1‑141 (MQ=25)
                                               aaTTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATg                                                                        >  1:260705/1‑141 (MQ=25)
                                                aTTTCGTGGCATGGGGCAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGa                                                                       >  1:514710/1‑141 (MQ=11)
                                                aTTTCGTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGa                                                                       >  1:519074/1‑141 (MQ=11)
                                                     gTGGCATGTCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTg                                                                  <  1:388415/141‑1 (MQ=255)
                                                     gTGGCATGGTCAAAATCCGTAGATCTGAATAGACCTGCGGTTCTTTTTATATAGAACGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTAAACACTTTTCTTTCTTACTTTAATATGACGGTg                                                                  <  1:221035/141‑1 (MQ=11)
                                                     gTGGCATGGGGAAAATCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTg                                                                  <  1:163019/141‑1 (MQ=255)
                                                     gTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTg                                                                  <  1:349083/141‑1 (MQ=255)
                                                      tGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATCCCTTGTCTTTCTTACTTTAATATGACGGTGa                                                                 >  1:122346/1‑141 (MQ=255)
                                                           tGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTg                                                            >  1:847202/1‑141 (MQ=38)
                                                             gCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCt                                                          <  1:890788/141‑1 (MQ=255)
                                                                aaaaTCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCaa                                                       <  1:501093/141‑1 (MQ=255)
                                                                   aTCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGa                                                    >  1:134863/1‑141 (MQ=255)
                                                                   aTCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGT‑ATTATGTGTAAATGCCGTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGa                                                    <  1:257599/141‑1 (MQ=14)
                                                                    tCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAg                                                   <  1:799051/141‑1 (MQ=255)
                                                                    tCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAg                                                   <  1:699313/141‑1 (MQ=255)
                                                                    tCCGTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAg                                                   <  1:415898/141‑1 (MQ=255)
                                                                     ccGTAGATCTGAAGACACCTACGGTTGTTTTTATGTAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATAGATACGTTGATATCTTGTCTTTCTTACTTTAATATGATGGTGATCTTGCTCAATGAgg                                                  <  1:563963/141‑1 (MQ=14)
                                                                      cGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGt                                                 <  1:839100/141‑1 (MQ=255)
                                                                       gTAGATCTGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGtt                                                <  1:735408/141‑1 (MQ=255)
                                                                             atGAAGAGACCTCCGGTTTTTTTTATATATAGAGTAAATCCAT‑TCAATACCTTTTTAAATATTAATTAAAGCGTTTAGACCTCGAAATCTTGTTTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAg                                          <  1:915336/140‑1 (MQ=2)
                                                                              tGAAGAGACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGa                                         <  1:665468/141‑1 (MQ=255)
                                                                                 agagACCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑CCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGAAATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGttat                                      >  1:67202/1‑141 (MQ=11)
                                                                                    gaCCTACGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTc                                   >  1:324662/1‑141 (MQ=255)
                                                                                       cTGCGGTTCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGAt                                <  1:3557/141‑1 (MQ=38)
                                                                                         acGGTTCTTTTTATATCGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGt                              <  1:278897/140‑1 (MQ=255)
                                                                                           ggTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGCTACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTCTTCAGATATTTCGATGTAc                            >  1:621/1‑141 (MQ=255)
                                                                                            gTTCCTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACa                           >  1:400387/1‑141 (MQ=255)
                                                                                              tCTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAAt                         <  1:595415/141‑1 (MQ=255)
                                                                                              tCTTTTTATATAGAGCGTAAATACAC‑GTAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTTTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAAt                         <  1:186263/141‑1 (MQ=255)
                                                                                               cTTTTTATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGCCGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATg                        <  1:422395/141‑1 (MQ=255)
                                                                                                tttttATGTAGAGCGTAAATCCAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCCATGAGGTTATTCAGATAATTCGATGTACAATgg                       >  1:580480/1‑140 (MQ=14)
                                                                                                 ttttATATAGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATggc                      >  1:659623/1‑139 (MQ=255)
                                                                                                  tttATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACa                     <  1:77591/141‑1 (MQ=255)
                                                                                                    tatataGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGt                   <  1:835111/141‑1 (MQ=255)
                                                                                                    tatataGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGt                   <  1:569528/141‑1 (MQ=255)
                                                                                                    tatataGAGCGTAAATACAC‑TCAATACCCTTTCAAGTATTCGTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGt                   <  1:70773/141‑1 (MQ=14)
                                                                                                     atagaGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTc                  <  1:396287/141‑1 (MQ=255)
                                                                                                      tctaGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCa                 <  1:748953/139‑1 (MQ=255)
                                                                                                      aaaagagCGTAAAAACAT‑TCAATACCTTTTAAAATATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACGTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCa                 <  1:176073/138‑1 (MQ=14)
                                                                                                       ataGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATATACAATGGCAGTCAg                <  1:689134/141‑1 (MQ=255)
                                                                                                        taGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAgg               <  1:806553/141‑1 (MQ=255)
                                                                                                        taGAGCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAgg               >  1:558967/1‑141 (MQ=255)
                                                                                                          gagCGTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGgtt             >  1:227306/1‑141 (MQ=255)
                                                                                                           agCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGgttt            >  1:768314/1‑141 (MQ=255)
                                                                                                             cGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGgtttaa          >  1:858399/1‑141 (MQ=40)
                                                                                                              gTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGCTCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGgtttaag         <  1:538648/141‑1 (MQ=255)
                                                                                                              gTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGgtttaag         <  1:240943/141‑1 (MQ=255)
                                                                                                              gTAAATACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGgtttaag         >  1:853334/1‑141 (MQ=255)
                                                                                                              gTAAATACAC‑ACAATACCTTTTAAGGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTAGATGTACAATGGCAGTCAGgtttaag         >  1:679754/1‑141 (MQ=14)
                                                                                                                aaaTACAT‑TCCATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGgtttaagtt       <  1:298997/141‑1 (MQ=255)
                                                                                                                aaaTACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGgtttaagtt       >  1:874643/1‑141 (MQ=255)
                                                                                                                aaaTACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGgtttaagtt       >  1:813747/1‑141 (MQ=255)
                                                                                                                aaaTACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGgtttaagtt       <  1:826696/141‑1 (MQ=255)
                                                                                                                aaaTACAC‑TCAATACCTTTGAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGgtttaagtt       >  1:555743/1‑141 (MQ=255)
                                                                                                                 aaTACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGCTATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGgtttaagttt      >  1:36757/1‑141 (MQ=255)
                                                                                                                 aaTACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGgtttaagttt      >  1:48060/1‑141 (MQ=255)
                                                                                                                 aaTACAT‑TCAATACCTGTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGgtttaagttt      >  1:549953/1‑141 (MQ=255)
                                                                                                                 aaTACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGgtttaagttt      <  1:104735/141‑1 (MQ=255)
                                                                                                                 aaTACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGgtttaagttt      >  1:805252/1‑141 (MQ=255)
                                                                                                                  aTACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGgtttaagtttt     >  1:462744/1‑140 (MQ=255)
                                                                                                                  aTACAC‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGGCAGTCAGgtttaagttta     >  1:100153/1‑141 (MQ=255)
                                                                                                                   tACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGTTGTACAATGACAGTCAGgtttaggtttaa    >  1:897241/1‑141 (MQ=255)
                                                                                                                   tACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGgtttaagtttaa    >  1:429893/1‑141 (MQ=255)
                                                                                                                   tACAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGgtttaagtttaa    >  1:181014/1‑141 (MQ=255)
                                                                                                                    aCAT‑TCAATACCTTTTAAAGTATTCTTTGCCGTATTGATACTTTGATATCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGGTTTACGTCTaaa   >  1:407414/1‑141 (MQ=255)
                                                                                                                       |                                                                                                                                           
CACTAATTTATCATGTCAGTGTTCGCTTAACTTGCTAGCATGATGCTAATTTCGTGGCATGGCGAAAATCCGTAGATCTGAAGAGACCTGCGGTTCTTTTTATATAGAGCGTAAATACAT‑TCAATACCTTTTAAAGTATTCTTTGCTGTATTGATACTTTGATACCTTGTCTTTCTTACTTTAATATGACGGTGATCTTGCTCAATGAGGTTATTCAGATATTTCGATGTACAATGACAGTCAGGTTTAAGTTTAAAA  >  CP000730/35851‑36108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑