New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1695023 =	81 (1.000)	5 (0.100) +ATTGGCATTTACGAAGTTTAAATGTGCAATTAGAATATATGTATAACAATATT	3/172	9.9	10.2%	coding (119/129 nt)	USA300HOU_1585	hypothetical protein
	?	CP000730	2830190 =	61 (0.750)					intergenic (+18/+173)	icaC/USA300HOU_2670	intercellular adhesion protein C/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TATTTATTCTTGTTTAGAGGGAGTGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTC  >  CP000730/1694886‑1695162                                                                                                                                          |                                                                                                                                             tatttattCTTGTTTAGAGGGAGTGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGa                                                                                                                                           <  1:401997/141‑1 (MQ=255)     tattCTTGTTTAGAGGGAGTGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTgg                                                                                                                                       <  2:296969/141‑1 (MQ=255)      attCTTGTTTAGAGGGAGTGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTggg                                                                                                                                      >  1:149290/1‑141 (MQ=255)       ttCTTGTTTAGAGGGAGGGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGa                                                                                                                                     >  2:362642/1‑141 (MQ=255)        tCTTGTTTAGAGGGAGTGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGAc                                                                                                                                    <  2:153991/141‑1 (MQ=255)        tCTTGTTAAAAGAGAGTGAGATAGAAATAATAAAGAACCACTAATGATATATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGAc                                                                                                                                    <  2:795105/141‑1 (MQ=255)         cTTGTTTAGAGGGAGTGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACACTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACa                                                                                                                                   <  1:82452/141‑1 (MQ=255)            gTTTAGAGGGAGTGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGaa                                                                                                                                >  2:33808/1‑141 (MQ=255)            gTTTAGAGGGAGTGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGaa                                                                                                                                <  1:275793/141‑1 (MQ=255)             tttAGAGGGAGTGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGaaa                                                                                                                               >  1:554299/1‑141 (MQ=255)              ttAGAGGGAGTGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAAt                                                                                                                              <  1:540633/141‑1 (MQ=255)              ttAGAGGGAGTGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAAt                                                                                                                              <  1:9765/141‑1 (MQ=255)              ttAGAGGGAGTGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAAt                                                                                                                              <  2:161280/141‑1 (MQ=255)                   gggAGTGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGatat                                                                                                                         >  2:756443/1‑141 (MQ=255)                          agaTAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCa                                                                                                                  <  2:214449/141‑1 (MQ=255)                           gaTAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCaa                                                                                                                 >  1:781286/1‑141 (MQ=255)                           gaTAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCaa                                                                                                                 >  1:781106/1‑141 (MQ=255)                             tAGAAATAATAAAGAACCACTAATGATTTATTAGGTAGTGGTTCTTACACATTAGCCAGATGTAATATGGCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCgaaa                                                                                                               <  2:358299/141‑1 (MQ=255)                              aGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAat                                                                                                              <  2:89671/141‑1 (MQ=255)                                      taaATAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcg                                                                                                      <  2:808383/141‑1 (MQ=255)                                       aaaGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACGTGAGTAAAACTCATGCATAAGGGAGAGGGACAGAAATGATATTTTCGCAAAATTTATTtcgt                                                                                                     >  2:673744/1‑141 (MQ=255)                                       aaaGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcgt                                                                                                     >  1:582592/1‑141 (MQ=255)                                         aGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTtcgtcg                                                                                                   <  2:432299/141‑1 (MQ=255)                                              cACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATTCATAATGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCa                                                                                              <  1:845942/141‑1 (MQ=255)                                               aCTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑c                                                                                            >  2:264272/1‑141 (MQ=255)                                                     gATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGGGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAAc                                                                                      <  1:154432/141‑1 (MQ=255)                                                     gATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAAc                                                                                      <  1:336672/141‑1 (MQ=255)                                                     gATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAAc                                                                                      <  1:336673/141‑1 (MQ=255)                                                        ttattaTGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTg                                                                                   <  2:436673/141‑1 (MQ=255)                                                          attatGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCa                                                                                 <  2:608350/141‑1 (MQ=255)                                                          attatGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCa                                                                                 <  2:559135/141‑1 (MQ=255)                                                           ttatGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCAt                                                                                <  1:814993/141‑1 (MQ=255)                                                            tatGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCCAACTTGCAt                                                                                >  1:587380/1‑141 (MQ=255)                                                             atGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCATTACAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGctcgt                                                                              >  2:732861/1‑137 (MQ=255)                                                               gTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGcc                                                                            >  2:645407/1‑141 (MQ=255)                                                               gTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGCGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGcc                                                                            >  2:310991/1‑141 (MQ=255)                                                                tAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCt                                                                           >  2:595288/1‑141 (MQ=255)                                                                     gCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGCTATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGa                                                                      <  1:439714/141‑1 (MQ=255)                                                                     gCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGa                                                                      <  2:207378/141‑1 (MQ=255)                                                                        ctTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATAttt                                                                                                                       <  2:205666/90‑1 (MQ=255)                                                                        ctTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAAtt                                                                   <  2:149290/141‑1 (MQ=255)                                                                        ctTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGCCCCA‑CCCCAACTTGCATTGCCTGTAGAAtt                                                                   <  2:287248/141‑1 (MQ=255)                                                                        ctTACACATTAGCCAGAGGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATAttt                                                                                                                       >  1:205666/1‑90 (MQ=255)                                                                            cacaTTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCtt                                                               >  2:573713/1‑141 (MQ=255)                                                                              caTTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCtttt                                                             <  1:223707/141‑1 (MQ=255)                                                                                ttAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCg                                                           >  1:607358/1‑141 (MQ=255)                                                                                 tAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGa                                                          >  1:425543/1‑141 (MQ=255)                                                                                   gCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGaaa                                                        <  1:397083/141‑1 (MQ=255)                                                                                      aGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGACTTTCTTTTCGAAATtc                                                     >  2:526073/1‑141 (MQ=255)                                                                                       gATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATtct                                                    <  2:554299/141‑1 (MQ=255)                                                                                       gATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATtct                                                    >  2:115385/1‑141 (MQ=255)                                                                                        aTGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATtctc                                                   <  2:781106/141‑1 (MQ=255)                                                                                        aTGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATtctc                                                   <  2:781286/141‑1 (MQ=255)                                                                                          gTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTa                                                 <  2:804845/141‑1 (MQ=255)                                                                                          gTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTa                                                 >  1:643599/1‑141 (MQ=255)                                                                                          gTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATATCTTTTCTAAATTCTCTa                                                 >  1:192233/1‑141 (MQ=255)                                                                                            aaTATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATg                                               <  1:593098/141‑1 (MQ=255)                                                                                             atatGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGt                                              >  1:394415/1‑141 (MQ=255)                                                                                             atatGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGt                                              >  1:268422/1‑141 (MQ=255)                                                                                             atatGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGt                                              <  1:275453/141‑1 (MQ=255)                                                                                                  tCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTgggg                                         >  2:700458/1‑141 (MQ=255)                                                                                                     ttAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGCGccc                                      >  2:55397/1‑141 (MQ=255)                                                                                                        aaaataaaatTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGccccac                                   >  1:148175/1‑141 (MQ=255)                                                                                                              aaatTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAAc                             >  1:770795/1‑141 (MQ=255)                                                                                                                atTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACtt                           <  2:683076/141‑1 (MQ=255)                                                                                                                 ttACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTg                          <  1:507895/141‑1 (MQ=255)                                                                                                                 ttACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTg                          <  1:766623/141‑1 (MQ=255)                                                                                                                 ttACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTg                          <  2:543348/141‑1 (MQ=255)                                                                                                                  tACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGc                         >  1:407035/1‑141 (MQ=255)                                                                                                                   aCATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGca                        <  2:268422/141‑1 (MQ=255)                                                                                                                      tGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACAt                     <  1:162844/141‑1 (MQ=255)                                                                                                                        agttttaCTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATta                   >  2:626556/7‑141 (MQ=255)                                                                                                                            ttaCTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGt               >  2:61215/3‑141 (MQ=255)                                                                                                                              aCTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTaa             >  1:654816/1‑141 (MQ=255)                                                                                                                                tgaTGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCTTTGCCTGTAGAATTTCTTTTCCAAATTCTCGATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGc           <  2:799389/139‑1 (MQ=255)                                                                                                                                tCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGc           <  2:80003/141‑1 (MQ=255)                                                                                                                                 cATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCt          >  2:825802/1‑141 (MQ=255)                                                                                                                                  aTGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAAGTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCGCCACCCCAACTTGCGCATTATATTAAGCTg         >  2:657190/1‑141 (MQ=255)                                                                                                                                  aTGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTg         >  2:504619/1‑141 (MQ=255)                                                                                                                                    gCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATGTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGAc       <  2:6723/141‑1 (MQ=255)                                                                                                                                         aGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTc  >  2:645326/1‑141 (MQ=255)                                                                                                                                          |                                                                                                                                             TATTTATTCTTGTTTAGAGGGAGTGAGATAGAAATAATAAAGAACCACTAATGATTTATTATGTAGTGGCTCTTACACATTAGCCAGATGTAATATGTCCTTAAAAATAAAATTACATGAGTAAAACTCATGCATAAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCA‑CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCCACCCCAACTTGCACATTATAGTAAGCTGACTTTTC  >  CP000730/1694886‑1695162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.