New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 1755658 =37 (0.650)3 (0.060) 3/242 NT 7.9% intergenic (‑55/+300) obg/rpmA GTP‑binding protein/ribosomal protein L27
?CP000730 1755694 = 36 (0.680)intergenic (‑91/+264) obg/rpmA GTP‑binding protein/ribosomal protein L27

TACATATTTTTCTCTTCTGTATGCGGTAATACCATTACCACCATCACCGGCTTTAAGAGATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAACTGTATTCCTTTGTC  >  CP000730/1755520‑1755796
                                                                                                                                          |                                                                                                                                             
tACATATTTTTCTCTTCTGTATGCGGTAATACCATTACCACCATCACCGGCTTTAAGAGATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTaga                                                                                                                                             >  1:85855/1‑141 (MQ=255)
 gtataagagcccctaatcactaaactataagggggacaaaggaatacagttgcagcgtttaaagaataaactgtaccacaattggtgctgagaaatataagtattttaaagcaaagatttataaaagtaactgcataagag                                                                                                                                            >  1:3082‑M1/138‑141 (MQ=255)
   atatTTTTCTCTTCTGTATGCGGTAATACCATTACCACCATCACCGGCTTTAAGAGATATTTTGACTTGATCGACAAACATATATCCCACCTCTTTTACATATAATTTTCATTTTCCCAACAATCACAGCATATTAGAccc                                                                                                                                          >  2:279229/1‑141 (MQ=255)
   ataagagcccctaatcactaaactataagggggacaaaggaatacagttgcagcatttaaagaataaactgtaccacaattggtgctgagaagtataggtatttgaaagcaaagatttataaaagtaactgcatgAGAGcc                                                                                                                                          <  1:555433‑M1/6‑1 (MQ=255)
     aagagcccctaatcactaaactataagggggacaaaggaatacagttgcagcgtttaaagaataaactgtaccacaattggtgctgataaatataagtattttaaagcaaagatttataaaagtaactgcataAGAGcccc                                                                                                                                        >  1:447492‑M1/134‑141 (MQ=255)
          tctcTTCTGTATGCGGTAATTCCATTACCAACATCACCGGCTTTAATAGATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTtata                                                                                                                                   <  2:294927/141‑1 (MQ=255)
          tctcTTCCGTATGCGGTAATACCATTACCACCATCACCGGCTTTAAGAGATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTtata                                                                                                                                   <  2:229068/141‑1 (MQ=255)
                      gCGGTAATACCATTAGCACCATCACCGGCTTTAAGAGATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAaataa                                                                                                                     <  1:107454/141‑1 (MQ=255)
                       cGGTAATACCATTACCACCATCACCGGCTTTAAGAGATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAaataat                                                                                                                    <  1:473407/141‑1 (MQ=255)
                        ggTAATACCATTACCACCATCACCGGCTTTAAGAGATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAAtt                                                                                                                   <  1:584786/141‑1 (MQ=255)
                        ggTAATACCATTACCACCATCACCGGCTTTAAGAGATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTCCATTTTCCCAAGAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAAtt                                                                                                                   <  1:352554/141‑1 (MQ=255)
                         gTAATACCATTACCACCATCACCGGCTTTAAGAGATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTa                                                                                                                  <  1:322295/141‑1 (MQ=255)
                              aCCATTACCACCATCACCGGCTTTAAGAGATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGc                                                                                                             <  2:503948/141‑1 (MQ=255)
                                      cgccgggaCCGGCTTTAGTAGTTATTTTGAGTTGATCTACAAACATATATGTCACCTCGTTTACATATAATTTTCATTTTCCTAATAATTATAGCATATTAGAGCCCTTTATATATTGTAAATAATTAGGGGCTCTTATGc                                                                                                     <  2:500840/134‑1 (MQ=255)
                                         caTCACCGGCTTTAAGAGATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGt                                                                                                  <  2:400937/141‑1 (MQ=255)
                                                   tttAAGAGATATTTTGACTTGAGCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTtata                                                                                        <  1:249173/141‑1 (MQ=255)
                                                      aaGAGATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAAt                                                                                     >  2:279923/1‑141 (MQ=255)
                                                       agatATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTGATTATTATGAGGCCCTTTTGCAGTTACTTTTATAAAtt                                                                                    >  2:505794/1‑140 (MQ=255)
                                                       agagATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATc                                                                                    <  2:660033/141‑1 (MQ=255)
                                                             atTTTGACTTGATCGACAAACATATAACTCACCTGTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCTCCTTAGATATTGTTAATAATTAGGGGCTCTTATGCAGCTACTTTTATAAATCTTTGCt                                                                             <  1:405754/141‑1 (MQ=255)
                                                                 tGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATCTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTaa                                                                         >  2:365175/1‑141 (MQ=255)
                                                                 tGACCTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTGTTATGCAGTTACTCTTATAAATCTTTGCTTTaa                                                                         >  1:454295/1‑141 (MQ=255)
                                                                  gACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTaaa                                                                        >  2:647865/1‑141 (MQ=255)
                                                                      actgtaccacaattggtgctgagaaatataagtattttaaagcaaagatttataaaagtaactgcataAGAGCCCCTAATTATTTAAAATATATAAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATAc                                                                    <  1:198253‑M1/73‑1 (MQ=255)
                                                                       gctctataaaCATATATCACACCTTCTTTACTTATAATTTTCACTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATCTTGTAAATAATTAGGGGCTCTTATGCAGATACTTTTATAAATCTTTGCTTTAAAATACt                                                                   <  2:163439/134‑1 (MQ=255)
                                                                       gATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACt                                                                   >  2:272881/1‑141 (MQ=255)
                                                                       gATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAAAAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCCGTTACTTTTATAAATCTTTGCTTTAAAATACt                                                                   >  2:571383/1‑141 (MQ=255)
                                                                                               ctTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTTAAAATACTTATATTTCTCAGCACCAATtgtg                                            >  2:127555/1‑141 (MQ=255)
                                                                                                    aCATATAATTTTCATTTTCCCAGTAATTATAGCATATTAGAGCCCCTTATATCTTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAACACGTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAg                                      >  1:452844/1‑141 (MQ=255)
                                                                                                     gtattttaaagcaaagatttataaaagtaactgcataAGAGCCCCTAATTATTTACAATATATAAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGt                                     >  2:198253‑M1/38‑141 (MQ=255)
                                                                                                        ataATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCATCACCAATTGTGGTACAGTTTa                                  <  1:662783/141‑1 (MQ=255)
                                                                                                        ataATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTa                                  >  1:178335/1‑141 (MQ=255)
                                                                                                            ttttcattttcCCAATACTTATAGCATATTAGAGCCCCTTATCGATTGTAAATAATTAGGGGCTCTTATGCAGTTAATTTTATTAATAATGCATTTAAAATGCTTGACGTTCTCAGCACCAATTGTGGTACAGTTTATTCt                              <  2:471133/141‑1 (MQ=255)
                                                                                                            ttttcattttcCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCt                              <  1:152384/141‑1 (MQ=255)
                                                                                                             tttcattttcCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCtt                             <  1:620484/141‑1 (MQ=255)
                                                                                                                   tttcCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACg                       >  1:357420/1‑141 (MQ=255)
                                                                                                                      cccAATAATTATAGCATATTAGAGCCCCTTATATATTGTCAATAATAAATAATACAAATGCAGAAAATGATACGAGTCGTTGCTTTAAAATATTGATATTTCTCTGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTg                    >  1:658557/1‑141 (MQ=255)
                                                                                                                          ataatTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAAc                <  1:609289/141‑1 (MQ=255)
                                                                                                                          ataatTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAAc                <  1:279923/141‑1 (MQ=255)
                                                                                                                           aaatTATACCTTTTTAGGGCCCCTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAACTg              <  1:121185/140‑1 (MQ=255)
                                                                                                                               gtaactgcataAGAGCCCCTAATTATTTACAATATATAAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCACCCGTAt           <  2:28747‑M1/130‑1 (MQ=255)
                                                                                                                                  aGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAACTGTATTcc        <  2:85913/141‑1 (MQ=255)
                                                                                                                                    cagatTAGTGCCCCTTTTTGATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAAGCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAACTGTATTCCtt      <  1:59116/138‑1 (MQ=255)
                                                                                                                                    cATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCTATTGTGGTACAGTTTATTCTTTAAACGCTCCAACTGTATTCCtt      <  1:365175/141‑1 (MQ=255)
                                                                                                                                    cATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAACTGTATTCCtt      <  2:665202/141‑1 (MQ=255)
                                                                                                                                      tatTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAACTGTATTCCTTTg    <  2:71714/141‑1 (MQ=255)
                                                                                                                                       atTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAACTGTATTCCTTTGt   <  1:380177/141‑1 (MQ=255)
                                                                                                                                        ttAGAGCCCCTTATATATTGGAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAACTGTATTCCTTTGTc  <  2:662272/141‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                             
TACATATTTTTCTCTTCTGTATGCGGTAATACCATTACCACCATCACCGGCTTTAAGAGATATTTTGACTTGATCGACAAACATATATCTCACCTCTTTTACATATAATTTTCATTTTCCCAATAATTATAGCATATTAGAGCCCCTTATATATTGTAAATAATTAGGGGCTCTTATGCAGTTACTTTTATAAATCTTTGCTTTAAAATACTTATATTTCTCAGCACCAATTGTGGTACAGTTTATTCTTTAAACGCTGCAACTGTATTCCTTTGTC  >  CP000730/1755520‑1755796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.