| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description | 
| RA | CP000730 | 76,322 | G→A | 51.0% | intergenic (+380/‑754) | USA300HOU_0072 → / → USA300HOU_0075 | universal stress protein/lysophospholipase | 
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 76,322 | 0 | G | A | 51.0% | ‑2.4 / inf | 412 | intergenic (+380/‑754) | USA300HOU_0072/USA300HOU_0075 | universal stress protein/lysophospholipase | 
| Reads supporting (aligned to +/- strand): ref base G (108/92); new base A (107/101); total (217/195) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.64e-01 | |||||||||||
Only 100 of 418 total aligned reads displayed.
ATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAT‑AAAAAGCTAATTACAAATGGCGTATTGATGAGACGTACATCAAAATAAA  >  CP000730/76182‑76461                                                                                                                                            |                                                                                                                                            ataGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGTTATATCTGAAATATTAAgg                                                                                                                                              >  2:503125/1‑141 (MQ=17)  aatataATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATACACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAgaga                                                                                                                                            >  2:493128/3‑141 (MQ=255)  aGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGa                                                                                                                                            <  1:529675/141‑1 (MQ=32)  aGTAAAATTTTAACAAAAAGGAGTCTAACATCTGACCTAAACCACAATTAAACGATATAAACAGGACGTTATCACTGTAGCTGTTGCCGACTATCCAAGTTAGGCATGGTGGTATCGTGATATATCTGAAATATTAAGGGa                                                                                                                                            <  2:321580/141‑1 (MQ=2)     agatttttAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACg                                                                                                                                         <  1:33088/137‑1 (MQ=12)        atgtgaaCAAAAAGGAGTCGTCTGTATGAACTATTTCAGAGATAAGCAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATAGGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACgtgg                                                                                                                                      <  2:286250/136‑1 (MQ=11)         ataaaaCAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACgtggt                                                                                                                                     <  2:520221/137‑1 (MQ=255)          tttAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATAAAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACgtggtg                                                                                                                                    <  1:451404/141‑1 (MQ=255)           ttAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGgtgt                                                                                                                                   <  2:598675/141‑1 (MQ=32)            tAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTa                                                                                                                                  >  1:555289/1‑141 (MQ=17)             aaCAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTaa                                                                                                                                 >  2:261867/1‑141 (MQ=17)              aCAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGCACGTGGTGTaca                                                                                                                                >  1:125108/1‑139 (MQ=12)               cAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTaaag                                                                                                                               >  2:36917/1‑140 (MQ=17)                aaaaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACg                                                                                                                              >  1:42578/1‑141 (MQ=17)                 aaaaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTaaagtt                                                                                                                             >  1:255297/1‑138 (MQ=17)                   aaGGCGTCTTCTGTATGAACTCTTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTtc                                                                                                                           <  1:303096/141‑1 (MQ=12)                   aaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTtc                                                                                                                           >  2:382048/1‑141 (MQ=17)                   aaGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTtc                                                                                                                           >  2:40549/1‑141 (MQ=12)                     ggAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTtcat                                                                                                                         <  1:389891/141‑1 (MQ=17)                     ggAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTtcat                                                                                                                         >  2:529147/1‑141 (MQ=17)                      gAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTtcatc                                                                                                                        <  1:629397/141‑1 (MQ=17)                            tctGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCaa                                                                                                                  >  1:443921/1‑141 (MQ=17)                            tctGTATGAACTATTTCAGAGATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTCGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGTACGTGGTGTAAACGTTCATCATTCaa                                                                                                                  >  1:404362/1‑141 (MQ=11)                             ctGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAAc                                                                                                                 >  2:414245/1‑141 (MQ=17)                              tGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACg                                                                                                                <  2:210525/141‑1 (MQ=17)                               gTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACga                                                                                                               <  2:7981/141‑2 (MQ=12)                               gTATGAACTATTGCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACga                                                                                                               <  2:356798/141‑2 (MQ=12)                                tATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACgat                                                                                                              <  2:612904/141‑3 (MQ=12)                                 aTGAATTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTc                                                                                                             <  1:245558/141‑1 (MQ=17)                                        aTTTCCGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGtt                                                                                                      <  1:262413/141‑1 (MQ=255)                                        aTTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGACCGTGGTGTAAACGTTCATCATTCAACGATCTACCGtt                                                                                                      <  1:191533/141‑1 (MQ=255)                                        aTTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGtt                                                                                                      >  1:137176/1‑141 (MQ=12)                                         tttCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTg                                                                                                     <  1:544123/141‑1 (MQ=17)                                         tttCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTg                                                                                                     >  1:376969/1‑141 (MQ=32)                                         tttCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTg                                                                                                     >  1:415954/1‑141 (MQ=255)                                          ttCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTgg                                                                                                    <  1:145388/141‑1 (MQ=255)                                           tCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTggg                                                                                                   >  2:576765/1‑141 (MQ=255)                                            cAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGt                                                                                                  >  1:113826/1‑141 (MQ=12)                                             aGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGGACGTGGTGTAAACGTTCAACATTCAACGATCTGACGTTGGGtt                                                                                                 >  2:353202/1‑141 (MQ=11)                                             aGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGtt                                                                                                 >  1:574605/1‑141 (MQ=255)                                              gATATACACAATTTAACAAGGATGTTATCACTGGAGCTGGTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGCAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTc                                                                                                <  1:563895/141‑1 (MQ=11)                                               atatAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCa                                                                                               <  2:43411/141‑1 (MQ=12)                                                    aaCAATTTAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAGTAGTAAGGGAACGTGGTGTAAACGTTCATCATTCCACGGTCTACCGTTGGGCTCACGAat                                                                                          >  1:78900/1‑141 (MQ=11)                                                     aCAATTTAACAAGGATGTTATCACTGTAGCCGTTTGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAata                                                                                         >  1:158931/1‑141 (MQ=255)                                                     aCAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGCATTATTAAGAGAACGTGGTGTAAACGTTCATCATTCTACGATCTACCGTTGGGTTCAAGAata                                                                                         >  1:608846/1‑141 (MQ=11)                                                      cAATTTAACAAGGATGTTATCACTGTAGCCGTTGTCTACTATCTAAGATGTGCATTGAGCTATCGTGATATAGCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAatat                                                                                        >  2:176435/1‑141 (MQ=11)                                                       aaTTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATg                                                                                       <  1:492331/141‑1 (MQ=255)                                                        aTTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGc                                                                                      <  1:27230/141‑1 (MQ=32)                                                        aTTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCCTCATTCACCGATCTACCGCTGGGTTCAAGAATAAGc                                                                                      >  2:189269/1‑141 (MQ=11)                                                         tttAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGcc                                                                                     <  2:220343/141‑1 (MQ=17)                                                          ttAACAAGGATGTTATCACGGTAGCCGTGGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTGCCGTTGGGTTCAAGAATATGccc                                                                                    <  2:116237/141‑1 (MQ=11)                                                           tAACAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGACATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGGGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGCTCAAGAATATGcccc                                                                                   >  1:648109/1‑141 (MQ=255)                                                           tAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGcccc                                                                                   >  1:601193/1‑141 (MQ=255)                                                           tAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGcccc                                                                                   >  2:513995/1‑141 (MQ=12)                                                           caaCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATGGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGcccc                                                                                   >  2:491006/2‑141 (MQ=255)                                                            aaCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCACCa                                                                                  >  2:549401/1‑141 (MQ=255)                                                             aCAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTGTACCGTTGGGTTCAAGAATATGCCCCaa                                                                                 >  1:148914/1‑141 (MQ=17)                                                             aCAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCaa                                                                                 >  2:100640/1‑141 (MQ=17)                                                             aCAAGGATGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTAAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCGTTCAAAGGTATACCGTTGGGTTCAAGAATATGCCCCaa                                                                                 >  2:569237/1‑141 (MQ=11)                                                             aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTTGGTTCAAGAATATGCCCCaa                                                                                 >  1:336029/1‑141 (MQ=255)                                                             aCAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCaa                                                                                 >  2:127290/1‑141 (MQ=12)                                                              cAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAAt                                                                                >  1:66223/1‑141 (MQ=255)                                                              cAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTAACGTTGGGTTCAAGAATATGCAGCAAt                                                                                >  2:13714/1‑141 (MQ=11)                                                                aGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAAttt                                                                              >  2:281332/1‑141 (MQ=255)                                                                  gATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTta                                                                            >  2:591625/1‑141 (MQ=255)                                                                   aTGTTATCACTGTAGCTGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGGTCAAGAATATGCCCCAATTTtat                                                                           >  2:667994/1‑141 (MQ=21)                                                                      ttATCACTGTAGCTGTTGGCTATTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATc                                                                        <  2:256910/141‑1 (MQ=11)                                                                           aCTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAGTTTAATATCAAAtt                                                                   >  2:229346/1‑141 (MQ=11)                                                                              gTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTgg                                                                <  1:516439/141‑1 (MQ=255)                                                                              gTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCACCAATTTTATATCAAATTTgg                                                                >  2:298697/1‑141 (MQ=255)                                                                                  ccGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGgaaga                                                            >  1:634015/1‑141 (MQ=255)                                                                                   cGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAAAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTatatacaagtcggaaaaa                                                           >  2:621674/1‑127 (MQ=11)                                                                                      tGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTCCCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGaaaaa                                                        >  2:88528/1‑141 (MQ=25)                                                                                      tGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGaaaaa                                                        >  2:478424/1‑141 (MQ=255)                                                                                        gCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGc                                                      <  1:281332/141‑1 (MQ=255)                                                                                         ttcctctccaatgtatGCATTGCGCTTTGGGGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGGTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCa                                                     <  2:166838/128‑1 (MQ=11)                                                                                         ctactaTCTAAGATATGCATTTAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCa                                                     <  1:93692/141‑1 (MQ=25)                                                                                         ctactaTCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCa                                                     <  1:660295/141‑1 (MQ=35)                                                                                         ctactaCTTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCa                                                     <  2:642830/141‑1 (MQ=11)                                                                                         ctacgaTCTAAGATATGCATTCAGCTATCGGGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCa                                                     <  2:156166/141‑1 (MQ=11)                                                                                          tactaTCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAt                                                    <  1:216659/141‑1 (MQ=34)                                                                                          tactaTCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAt                                                    <  2:249535/141‑1 (MQ=255)                                                                                           attgtCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATGAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCCT‑a                                                  <  2:310153/137‑1 (MQ=11)                                                                                           actaTCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAT‑a                                                  >  1:178821/1‑141 (MQ=35)                                                                                            ctaTCCAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGCGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAT‑aa                                                 <  2:393089/141‑1 (MQ=255)                                                                                             taTTTAAGATATGCATTGAGTTAGCTTTATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAT‑aaa                                                <  1:618849/141‑1 (MQ=255)                                                                                             taTCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCATGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAT‑aaa                                                <  1:352609/141‑1 (MQ=255)                                                                                                ttAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGTAAATGCAT‑aaaaaa                                             <  2:452461/140‑2 (MQ=11)                                                                                                tgaaGGTATGTATTGAGGTATCGTGATAGATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAT‑aaaaaa                                             <  2:444428/139‑2 (MQ=11)                                                                                                cTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAAAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGaaaaaaaaa‑aaaaaa                                             <  2:654090/141‑2 (MQ=11)                                                                                                   aGATGTGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGACCCAAATTTATATCAAATTTGGAAGAAGAAGCAT‑aaaaaagct                                          >  1:470441/1‑137 (MQ=11)                                                                                                      tatGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCATAAAAAAGCTAAt                                        >  1:86243/1‑141 (MQ=18)                                                                                                       atGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAT‑AAAAAGCTAATTa                                      >  2:270975/1‑141 (MQ=40)                                                                                                          cATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAT‑AAAAAGCTAAGTCCaa                                   >  1:225491/1‑141 (MQ=25)                                                                                                                     cGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAT‑AAAAAGCTAATTACAAATGGCGTATtg                        <  2:72819/141‑1 (MQ=40)                                                                                                                             atCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAT‑AAAAAGCTAATTACAAATGGCGTATTGATGAGACg                >  1:28660/1‑141 (MQ=39)                                                                                                                                   aaaatTAAAGGAACGTGGTGTAAACGTTCACCATTCAACCGTCTACCGTTGGGTTCAAGAATATGCCCCAAATATAAATCAAATTTGGAAGAAAAAGCAT‑AAAAAGCTAATTACAAATGGCGTATTGATGAGACGAACATc          <  2:542632/138‑1 (MQ=14)                                                                                                                                       ttAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAT‑AAAAAGCTAATTACAAATGGCGTATTGATGAGACGTACACCaaaa      >  2:341249/1‑141 (MQ=255)                                                                                                                                         aaGGGAGCGTGGTGTAAACGTTAATCATTCAACGGTCTACCGTTGGGTTGACGAATATGCCCCAATTTGATATCAAATTTGGAAGAAAAAGCAT‑AAAAAGCTAATTACAAATGGCGTATTGATGAGACGTACATCAAAATa    <  1:596671/141‑1 (MQ=14)                                                                                                                                         aaGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAT‑AAAAAGCTAATTACAAATGGCGTATTGATGAGACGTACATCAAAATa    >  2:606795/1‑141 (MQ=40)                                                                                                                                            |                                                                                                                                            ATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGTTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAAATTTGGAAGAAAAAGCAT‑AAAAAGCTAATTACAAATGGCGTATTGATGAGACGTACATCAAAATAAA  >  CP000730/76182‑76461 | 
| Alignment Legend | 
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG | 
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑ |