| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 613921 = | 126 (1.410) | 5 (0.060) | 3/248 | 15.1 | 4.2% | coding (2233/2844 nt) | sdrC | Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrC |
| ? | CP000730 | = 613908 | 114 (1.420) | coding (2220/2844 nt) | sdrC | Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrC | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/614063‑613921‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgctgtctgaatcTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGATGTTTCTTCTTCGTAGTAGCCATTATCAAGTGTGAAATCATCATGATCCGTAATTGTTACATCAACTTC < CP000730/613908‑613771 GAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAA < 1:323368/141‑1 AATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCGGAGTCGCTGTCTGAAT > 2:140102/1‑141 ATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATC > 1:762184/1‑141 ATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATC > 2:729418/1‑141 GCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAGTCTGTATCGCTATCTGAGTCTGCGTCGTCGTCTGAATCTct > 2:112174/1‑139 ctatccgaGTCTGAGTCTGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGAT < 2:307825/133‑1 CTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCT < 1:516133/56‑1 GTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCT < 2:274011/42‑1 CTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGATGTTTCTTCTTCGTAGTAGCCATTATCAAGTGTGAAATCATCATGAT > 1:696015/1‑141 CTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTAT < 2:908345/90‑1 AGTCGCTGTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGATGTTTCTTCTTCGTAGTAGCCATTATCAAGTGTGAAATCATCATGATCCGTAATTG < 2:115715/141‑1 TCGCTGTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGATGTTTCTTCTTCGTAGTAGCCATTATCAAGTGTGAAATCATCATGATCCGTAATTGTT > 1:611630/1‑141 CGCTGTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGATGTTTCTTCTTCGTAGTAGCCATTATCAAGTGTGAAATCATCATGATCCGTAATTGTTA > 1:466277/1‑141 CGCTGTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGAAGATAACTGATGATTGTTCTTAGTAGTAGCCATTATCACGTGTGAAATCATCATGATCCGTAATTGTTA > 1:866785/1‑141 CTGTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGATGTTTCTTCTTCGTAGTAGCCATTATCAAGTGTGAAATCATCATGATCCGTAATTGTTACA < 2:757259/141‑1 GTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGATGTTTCTTCTTCGTAGTAGCCATTATCAAGTGTGAAATCATCATGATCCGTAATTGTTACATC > 1:13263/1‑141 TCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGATGTTTCTTCTTCGTAGTAGCCATTATCAAGTGTGAAATCATCATGATCCGTAATTGTTACATCA < 1:825097/141‑1 ATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGATGTTTCTTCTTCGTAGTAGCCATTATCAAGTGTGAAATCATCATGATCCGTAATTGTTACATCAACTTC < 1:892930/141‑1 ATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGATGTTTCTTCTTCGTAGTAGCCATTATCAAGTGTGAAATCATCATGATCCGTAATTGTTACATCAACTTC < 1:616935/141‑1 GAATCGCTATCTGAGTCTGAGTCGCTATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/614063‑613921‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgctgtctgaatcTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGATGTTTCTTCTTCGTAGTAGCCATTATCAAGTGTGAAATCATCATGATCCGTAATTGTTACATCAACTTC < CP000730/613908‑613771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |