| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2504852 = | 59 (1.550) | 20 (0.650) | 11/222 | 2.2 | 28.5% | intergenic (+156/+248) | USA300HOU_2365/gltT | hypothetical protein/DAACS family dicarboxylate/amino acid:sodium (Na+) or proton (H+) symporter |
| ? | CP000730 | = 2505034 | 53 (1.730) | intergenic (+338/+66) | USA300HOU_2365/gltT | hypothetical protein/DAACS family dicarboxylate/amino acid:sodium (Na+) or proton (H+) symporter | |||||
Only 100 of 120 total aligned reads displayed.
CAAATTTTAGTTGCCATCAAGGTATATACGAGTAAAAGCAGCGGTAAGTTGATTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGTCCC > CP000730/2504712‑2504992 | cggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttagcgcatgcataaaagcccctaacaacctgaggtcactacgcttctgttcgcctgcgcattag < 1:399276‑M1/1‑1 (MQ=255)cAAATTTTAGTTGCCATCAAGGTATATACGAGTAAAAGCAGCGGTAAGTTGATTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTg > 1:111909/1‑141 (MQ=255)cAAATTTTAGTTGCCATCAAGGTATATACGAGTAAAAGCAGCGGTAAGTTGATTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTg > 1:176239/1‑141 (MQ=255) ggttcgcctgcgctttagcgcatgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttagc < 1:21069‑M1/2‑1 (MQ=255) gttcgcctttgcttttgcgcatgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttagcg > 1:98609‑M1/139‑141 (MQ=255) gttcgcctgcgctttagcgcatgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttagcg < 1:275391‑M1/3‑1 (MQ=255) aaTTTTAGTTGCCATCAAGGTATATACGAGTAAAAGCAGCGGTAAGTTGATTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTgcg < 1:406833/141‑1 (MQ=255) aTTTTAGTTGACATCAAGGTATATACGAGTAAAAGCAGCGGTAAGTTGATTTCCAATTTGTTATCATTTTACTGATGCTTTTTATATTTGACATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTgcgc < 2:243704/141‑1 (MQ=255) ttttAGTTGCCATCAAGGTATATACGAGTAAAAGCAGCGGTAAGTTGATTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCgca < 1:398952/141‑1 (MQ=255) tcgccttcgctttagcgcatgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCgca > 2:140811‑M1/137‑141 (MQ=255) tcgcctgcgctttagcgcatgcataacagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCgca > 1:134425‑M1/137‑141 (MQ=255) tcgcctgcgcgttagcgcatgcataaatgcccctaacaacctgaggtcactacgcttccgttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCgca > 1:380245‑M1/137‑141 (MQ=255) cgcctgcgctttagcgcatgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCgcat < 1:301643‑M1/6‑1 (MQ=255) gcctgcgctttagcgcatgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCgcatg > 1:85721‑M1/135‑141 (MQ=255) gcctgcgctttagcgcatgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCgcatg < 1:29470‑M1/7‑1 (MQ=255) gcctgcgctttagcgcatgcataaaagcccctaacaacctgaggtcactacgcttccgttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCgcatg > 2:60637‑M1/135‑141 (MQ=255) ccgtgcgctttagcgtatgcataaaagaacctatcaacctggggtcattacgtttcggttcgcctgcgctttagcgcatggataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCgcatg > 2:111909‑M1/135‑141 (MQ=255) cctgcgctttagcgcatgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCgcatgc < 1:294422‑M1/8‑1 (MQ=255) cctgcgctttagcgcatgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgctcccgttcgcctgcgctttaGCgcatgc < 2:147354‑M1/8‑1 (MQ=255) ctgcgctttagcgcatgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCgcatgca > 2:147311‑M1/133‑141 (MQ=255) ctgcactgctgcgcatgcataacagccccttacaaccttaagtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCgcatgca > 2:315892‑M1/133‑141 (MQ=255) ttcgcttttgcgcatgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCgcatgcat > 2:273133‑M1/132‑141 (MQ=255) ttGCCATCAAGGTATATACGAGTAAAAGCAGCGGTAAGTTGATTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATa > 1:35737/1‑141 (MQ=255) gcgctttagcgcatgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATa > 2:192356‑M1/131‑141 (MQ=255) gCCATCAAGGTACATACGAGTAAAAGCAGCGGTAAGTTGATTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATaaa < 2:153699/141‑1 (MQ=255) agcgcatgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttagcgcatggtaataaagag < 1:44490‑M1/18‑12 (MQ=255) agcgcatgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAAAGcc < 2:27198‑M1/17‑1 (MQ=255) agcgcatgcataaaagcccctaacaacctgaggtcactacgcctcggttcgcctgcgctttagcgcatgcataaaaggccctaacaacctgaggtcactacgcttcagttcacctgcgcctcagcgcgtgcagaagacgcc < 2:336526‑M1/18‑10 (MQ=255) aagcgggtaagagcccctaacaagctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAAAGCCCCTa > 2:384447‑M1/121‑141 (MQ=255) gTATATACGAGTAAAAGCAGCGGTAAGTTGATTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTaa > 1:288002/1‑141 (MQ=255) atgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAAAGCCCCTaac > 1:260823‑M1/119‑141 (MQ=255) atgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAAAGACACTaac < 2:84641‑M1/23‑1 (MQ=255) tgcataaatgcccctagcaacctggtgtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagcccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAAAGCCCCTaaca > 2:176239‑M1/118‑141 (MQ=255) tgcataaaagcccctaacaacctgaggtcactacgcttcggttcgcctgcgcattagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAAAGCCCCTaaca < 2:240529‑M1/24‑1 (MQ=255) cGAGTAAAAGCAGCGGTAAGTTGATTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTg < 1:297263/141‑1 (MQ=255) aagcccctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAAAGCCCCTAACAACCTGAg < 2:404771‑M1/31‑1 (MQ=255) aGTAAAAGCAGCGGTAAGTTGATTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAg > 2:405031/1‑141 (MQ=255) ctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCgcatgcat < 2:154934‑M1/10‑1 (MQ=255) ctaacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCgcatgcat > 1:154934‑M1/105‑114 (MQ=255) agcagcGGTAAGTTGATTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCACGGACATCAGCTCATAACAACCGGAGGTCACt > 1:222389/1‑141 (MQ=255) aacaacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAAAGCccctaacaacctacggtttttac < 2:268251‑M1/39‑12 (MQ=255) cGGTAAGTTGATTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCt < 1:7965/141‑1 (MQ=255) aacctggggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCt > 1:394468‑M1/100‑141 (MQ=255) aacctgaggtcactacgcttcggttcgcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCt > 1:216834‑M1/100‑141 (MQ=255) acctgaggtagctccgcttcggttcgcctgggcttttgcgcatgcataaaagaccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGctt > 2:101961‑M1/99‑140 (MQ=255) tGATTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCg < 1:134882/141‑1 (MQ=255) aTTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGcc > 1:175007/1‑141 (MQ=255) aTTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGcc < 2:35737/141‑1 (MQ=255) aTTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGcc < 2:229875/141‑1 (MQ=255) ttCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTg < 1:576/141‑1 (MQ=255) ttCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTg < 1:76723/141‑1 (MQ=255) cAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTgcgc < 2:355180/141‑1 (MQ=255) aaTCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAgcgc > 1:101961/1‑141 (MQ=255) aTCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCgca > 1:315874/1‑141 (MQ=255) aTCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCgca > 2:72254/1‑141 (MQ=255) aTCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCgca > 1:315892/1‑141 (MQ=255) gcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcctccgttcgcctgcgctttagcgc > 2:81121‑M1/74‑77 (MQ=255) gcctgcgctttagcgcatgcataaaagtccctaacaacctgaggtcactacgcctccgttcgcctgcgctttagcgc < 1:81121‑M1/4‑1 (MQ=255) ttttTCTGCTGCTTTTTATTTTTTAACTACTTTCATCTTGAATACTGCCACTTGCCGTTCATCTGCGCTGTGCGCTTCCTTAAGCGCCCCTGACCCCCTGATGTCACTGCGCTCCGGTTCGCCTGCGCCTTAGCgcatgca < 2:413888/141‑1 (MQ=255) ccgccccttagcgcatgcataaaagcccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAATGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGCCTGCGCTTTAGCgcatgca > 2:405447‑M1/72‑141 (MQ=255) ttACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCCCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATa < 1:252615/141‑1 (MQ=255) aCTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATaaa < 1:315602/141‑1 (MQ=255) aCTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATaaa > 1:112410/1‑141 (MQ=255) tagcgcatgcataaaagtccctaacaacctgaggtcactgcgcttccgttcgcctgcgctttaGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGCCTGCGCTTTAGCGCATGCATAAaagtc > 1:305554‑M1/64‑139 (MQ=255) tttttATATTTTAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCTCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACATCCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTa < 2:64048/141‑1 (MQ=255) atgcataaaagtccctaacaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCGCAACGCTTTTTTTCGCCTGCGCATtatcgcatgaatagatgtcccttat < 2:224772‑M1/84‑13 (MQ=255) tataTTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTaacaa > 1:352073/1‑141 (MQ=255) tGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTATCAACCTGAGGTCACTGCGCTCCCGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAg < 2:400734/141‑1 (MQ=255) aaTACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTc < 1:152467/141‑1 (MQ=255) tACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCAc < 1:55137/141‑1 (MQ=255) aCTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTACGCATGCATTAAAACCCCTTAAAACCTAAGGTCACTACGCTCCGGTTCGCCTCCGCTATAGTGCATGCATAAAAGCCCCTAACAACCTTAGGGCaat > 2:270851/1‑139 (MQ=18) ttCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACg < 2:187039/141‑1 (MQ=255) ttCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACg > 2:285104/1‑141 (MQ=255) acaacctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGTCCCTAACAACCTGAGGTCACTACg > 2:112410‑M1/41‑141 (MQ=255) ctgaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATTAAAGCCCCTTACaacctttgg < 2:361346‑M1/32‑5 (MQ=255) gaggtcactacgcttccgttcgcctgcgctttaGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCGCCGGATCGCCTGCGCATTATCGCATGCATAAAAGTCCCTAACACCCTGCGGTCACTACGcttccgt < 2:116937‑M1/108‑4 (MQ=255) gAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCCCTGCGCTCCGGTTCGCCTGCCCCTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGGCACTACGCTTCGGtt > 1:201095/1‑141 (MQ=255) gAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGtt > 2:134425/1‑141 (MQ=255) gAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGtt > 1:164659/1‑141 (MQ=255) gAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGtt > 1:147311/1‑141 (MQ=255) aTAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCCCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCg < 2:127403/141‑1 (MQ=255) tcactacgcttccgttcgcctgcgctttaGCGCATGCATaaaa > 1:345713‑M1/30‑43 (MQ=255) tcactacgcttccgttcgcctgcgctttaGCGCATGCATaaaa < 2:345713‑M1/14‑1 (MQ=255) cactccgcttcggttcgcctgcgctttaGCGCATGCATAAAGGTCCCTAACAACCTGAGGTCACTACGCTTCCGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGcc > 1:332618‑M1/29‑141 (MQ=255) cactacgcttcggttcgcctgcgctttaGCGCATGCATAAAAGTCCCTAACAACCTGAGGTCACTACGCTTCCGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGcc > 1:258032‑M1/29‑141 (MQ=255) aGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGcc > 2:316752/1‑141 (MQ=255) cTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGGTCGCCtc > 2:380245/1‑140 (MQ=255) cACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTTCGCTCCGGGTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGCCTgcgc > 1:143931/1‑141 (MQ=255) aattGCCGTTCGCCTTAGCTTTGCTCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTTCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGCCTGCGCt < 2:10040/139‑1 (MQ=255) gTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCGGAGGTCACTGCGCTCCGGTTAGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTAAGGTCACTACGTGTCTTATCGCCTTCGCATTAgcgg > 2:205679/1‑140 (MQ=14) cTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGCCTGCGCTTTAGCgcttgcat > 1:145578/1‑141 (MQ=255) tGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTTACTACGCTCCGGTTCGGCTGCGCCTTAGCGCATGCATTAAAGGCCCTAACAACCTAAGGTCACTAAGGTTCGGTTCAGCTGCGCTATAGCgcatgcatt > 2:223464/1‑140 (MQ=11) gcgcaaaGCGCAGGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGCCTGCGCTTTAGCGCATGCATaa < 1:376218‑M1/134‑1 (MQ=255) cgcTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACg > 1:34578/1‑107 (MQ=255) cgcTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACg < 2:34578/107‑1 (MQ=255) gcctggcgcATGAATGAAAACCCCTATGTACCTGCGGTCACGGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCGGACGACCTGCGGTCACTACGCGTCGGTTCGCCTGTGCTTTAGCGCATGCATaaaa < 2:133283/136‑1 (MQ=14) taGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTTCCGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGTc > 2:175007‑M1/3‑141 (MQ=255) GCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACg > 2:162000‑M1/1‑101 (MQ=255) GCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGTccc < 1:78332‑M1/141‑1 (MQ=255) GCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGTccc < 1:405447‑M1/141‑1 (MQ=255) | CAAATTTTAGTTGCCATCAAGGTATATACGAGTAAAAGCAGCGGTAAGTTGATTTCCAATTTGGAATCATTTTACTGCTGCTTTTTATATTTGAAATACTTTCATATTGAATAGCTCCACTTGCCGTTCGCCTGCGCTTTGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTGCGCTCCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGCCCCTAACAACCTGAGGTCACTACGCTTCGGTTCGCCTGCGCTTTAGCGCATGCATAAAAGTCCC > CP000730/2504712‑2504992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |