New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 2000170 =NA (NA)3 (0.120) 3/244 NT NA noncoding (1222/2921 nt) rrl3 23S ribosomal RNA
?CP000730 2000187 = NA (NA)noncoding (1205/2921 nt) rrl3 23S ribosomal RNA

TGGCGTTGCCCAGACAACTAGGATGTTGGCTTAGAAGCAGCCATCATTTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGACACTGCGCCGAAAATGTACCGGGGCTAAACATATTACCGAAGCTGTGGATTGTCCTTTGGACAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/2000315‑2000170
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggacaatCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCCTTTTC  >  CP000730/2000187‑2000325
                                                                                                                                                                                                                                                                                             
TGGCGTTGCCCAGACAACTAGGATGTTGGCTTAGAAGCAGCCATCATTTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGACACTGCGCCGAAAATGTACCGGGGCTAAACATATTACCGAAGCTGTGGATTGTCCTTTG                                                                                                                                                   <  2:168394/140‑1
TGGCGTTGCCCAGACAACTAGGATGTTGGCTTAGAAGCAGCCATCATTTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGACACTGCGCCGAAAATGTACCGGGGCTAAACATATTACCGAAGCTGTGGATTGTCCTTTG                                                                                                                                                   <  2:105706/140‑1
TGGCGTTGCCCAGACAACTAGGATGTTGGCTTAGAAGCAGCCATCATTTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGACACTGCGCCGAAAATGTACCGGGGCTAAACATATTACCGAAGCTGTGGATTGTCCTTTG                                                                                                                                                   >  2:278887/1‑140
  GCGTTGCCCAGACAGCTAGGATGTTAGCTTAGAAGCAGCCATCATTTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGACATTGCGCCGAAAATGTACCGGGGCTAAACATATTACCGATGCTGTGGATTGTCCTTTGGA                                                                                                                                                 <  1:194101/140‑1
  GCGTTGCCCAGACAACTAGGATGTTGGCTTAGAAGCAGCCATCATTTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGACACTGCGCCGAAAATGTACCGGGGCTAAACATATTACCGAAGCTGTGGGTTGTCCTTTGGA                                                                                                                                                 >  1:52447/1‑140
  GCGTTGCCCAGACAACTAGGATGTTGGCTTAGAAGCAGCCATCATTTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGACACTGCGCCGAAAATGTACCGGGGCTAAACATATTACCGAAGCTGTGGATTGTCCTTTGGA                                                                                                                                                 >  1:196370/1‑140
   CGTTGCCCAGACAACTAGGATGTTGGCTTAGAAGCAGCCATCATTTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGACACTGCGCCGAAAATGTACCGGGGCTAAACATATTACCGAAGCTGTGGATTGTCCTTTGGAC                                                                                                                                                >  2:38052/1‑140
    GTTGCCCAGACTACTAGGCTGTTGGCTTAGAAGCAGCCCTCATTTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGACACTGCGCCTAAAATGTACCGGGGCTAAACATCTTACCGAAGCTGTGGATTGTTCTTTGGACA                                                                                                                                               <  2:244425/140‑1
     TTGCCCAGACAACTAGGATGTTGGCTTAGAAGCAGCCATCATTTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGACACTGCGCCGACAATGTACCGGGGCTAAACATATTACCGAAGCTGTGGATTGTCCTTTGGACAA                                                                                                                                              >  2:175651/1‑140
      TGCCCAGACAACTAGGATGTTGGCTTAGAAGCAGCCATCATTTAAAGAGGGCGTAATAGCTCACTAGTCGAGTGACACTGCGCCGAAAATGTACCGGGGCTAAACATATTACCGAAGCTGTGGATTGTCCTTTGGACAAT                                                                                                                                             <  2:99254/140‑1
                                AGAAGCAGCCATCAATTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGACACTGCGCCGAAAATGTACCGGGGCTAAACATATTACCGAAGCTGTGGATTGTCCAAAGGACAATCCACAGCTTCGGTAATATGTTTAGCC                                                                                                                   <  1:150203/140‑1
                                    GCAGCCATCATTTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGACACTGCGCCGAAAATGTACCGGGGCTAAACATATTACCGAAGCTGTGGATTGTCCAAAGGACAATCCACAGCTTCGGTAATATGTTTAGCCCCGG                                                                                                               <  1:276412/140‑1
                                                                                                                                     TCCTTTGGACAATCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCCATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTCGTTCTCTGGGCAACGC              >  2:282389/1‑140
                                                                                                                                       CTTTGGACAATCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTTTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAGCATCCTAGTTGTCTGGGCAACGCCA            >  1:193757/1‑140
                                                                                                                                         aagtACACTCCACAGCTGCGNTNATANGTTTAGCCCCTGTACATTTTCGGCGCAGTGTCCCTCGACTAGTGAGCTATTACGCACTATTTAAATGATGGCTGCTTCTAAGCCAACATCCTTGTTGTCTGGGCAACGCCACA          <  1:207550/136‑1
                                                                                                                                          cggtCAATCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACAT         <  1:567/136‑1
                                                                                                                                          TGGACAATCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTTTGGGCTACGCaccgt         >  2:181543/1‑135
                                                                                                                                           ggcCAATCCACCGCCTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATC        <  2:169533/137‑1
                                                                                                                                           GGACAATCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATC        <  2:240830/140‑1
                                                                                                                                            GACAATCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCC       <  2:187828/140‑1
                                                                                                                                             aaAATCCAGAGCCTCGGTAATATGTTTAGCCGCGGTACATTTTCGGCGCAGTGTCTCTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCCT      <  2:169286/138‑1
                                                                                                                                              CAATCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGCGCTATTTTGCCCTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCCTT     >  1:92032/1‑140
                                                                                                                                              CAATCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCCTT     >  2:269765/1‑140
                                                                                                                                              CAATCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGATGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCCTT     >  2:104743/1‑140
                                                                                                                                              CAATCCACAACTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCACCATCCTAGTTGTCTGGGCAACGCCACATCCTT     >  2:202052/1‑140
                                                                                                                                               atTCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTCTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCCTTT    <  1:281614/138‑1
                                                                                                                                               AATCCCCAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCCTgt    <  2:117216/140‑3
                                                                                                                                               AATCCACTGCTTCGATAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAACGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCCTTT    <  1:44029/140‑1
                                                                                                                                               AATCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCCTTT    <  1:162371/140‑1
                                                                                                                                               AATCCACAGCTTCGGTAATATGTTTAGCCCCGCTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATTCTTT    <  1:217103/140‑1
                                                                                                                                                ATCCACAGCTTCGGTAATATTTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCCTTTT   <  1:50203/140‑1
                                                                                                                                                ATCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCCTTTT   >  1:243303/1‑140
                                                                                                                                                ATCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCCTTTT   <  1:203387/140‑1
                                                                                                                                                 TCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCCTTTTC  <  1:65068/140‑1
                                                                                                                                                 TCCACAGCTTCGGTAATATGCTTAGCCACGGTACACTTTCGGCCCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTATGGGCAACGCCACATCCTTTTC  >  2:302545/1‑140
                                                                                                                                                                                                                                                                                             
TGGCGTTGCCCAGACAACTAGGATGTTGGCTTAGAAGCAGCCATCATTTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGACACTGCGCCGAAAATGTACCGGGGCTAAACATATTACCGAAGCTGTGGATTGTCCTTTGGACAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/2000315‑2000170
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggacaatCCACAGCTTCGGTAATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTGGGCAACGCCACATCCTTTTC  >  CP000730/2000187‑2000325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.