BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	842904 =	99 (0.920)	4 (0.050) +TTTCGAAAAGAAATTCTACAAACAATGCA	3/222	12.0	4.5%	intergenic (+290/‑372)	uvrA/hprK	excision endonuclease subunit UvrA/HPr kinase
*	?	CP000730	2220661 =	118 (1.100)	4 (0.050) +TTTCGAAAAGAAATTCTACAAACAATGCA	3/222	12.0	4.5%	intergenic (‑312/+250)	USA300HOU_2091/atpC	hypothetical protein/F‑ATPase superfamily proton(H+)‑ or sodium (Na+)‑translocating F‑type ATPase epsilon subunit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 121 total aligned reads displayed.

AAAATGAAATGTCGACTGTAGATAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAACCACTACATCATAAATCTT  >  CP000730/2220522‑2220801

aaaaTGAAATGTCGACTGTAGATAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAAGCAATGTCTAGACTCTATAGTGTTGTATTTGGCagtag                                                                                                                                             <  1:528176/141‑1 (MQ=255)

  aatgaaatgTCGACTGTAGATAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGtt                                                                                                                                           >  2:805798/1‑141 (MQ=255)

  aatgaaatgTCGACTGTAGATAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGtt                                                                                                                                           >  2:805942/1‑141 (MQ=255)

  aatgaaatgTCGACTGTAGATAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGtt                                                                                                                                           <  1:1133914/141‑1 (MQ=255)

    tgaaatgTCGACTTTAGATAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGa                                                                                                                                         <  2:1134957/141‑1 (MQ=255)

    tgaaatgTCGACTGTAGATAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGa                                                                                                                                         >  2:657495/1‑141 (MQ=255)

    agaaatgTCGACTGTAGATAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGa                                                                                                                                         <  1:893359/140‑1 (MQ=255)

    agaaatgTCGACTGAAGATAGTGGTGAAGGAAACTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGa                                                                                                                                         <  1:651134/140‑1 (MQ=255)

        atgTCGACTGTAGAGAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACggg                                                                                                                                     <  1:373275/141‑1 (MQ=255)

         tgTCGACTGTAGATAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACgggg                                                                                                                                    <  1:75043/141‑1 (MQ=255)

          gTCGACTGTAGATAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGc                                                                                                                                   <  2:921646/141‑1 (MQ=255)

          gTCGACTGTAGATAGTGGTGAAGAAAATTTTGATTTGAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGc                                                                                                                                   <  2:160545/141‑1 (MQ=255)

           tCGACTGTAGATAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGcc                                                                                                                                  <  1:505309/141‑1 (MQ=255)

                  tAGATAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACAt                                                                                                                           <  1:240152/141‑1 (MQ=255)

                    gctAGTGGTGAAGGAAATTTTGCTTTTAGCAATCTATTAGTGATTGTAAACAAGTAAAACTGTTCTTGGGAGTCGGACATGAATCAATGTCAAGTCTCCATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCCACATaa                                                                                                                         >  2:469017/3‑141 (MQ=255)

                    gATAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATaa                                                                                                                         >  1:1161089/1‑141 (MQ=255)

                        gtggggAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGaa                                                                                                                     <  2:100584/141‑1 (MQ=255)

                         tggtgAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGaaa                                                                                                                    <  2:1064193/141‑1 (MQ=255)

                              aaGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACtt                                                                                                               <  1:375299/141‑1 (MQ=255)

                               aGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACttt                                                                                                              <  2:884318/141‑1 (MQ=255)

                                ggAAATTTTGATTTTACTAGTCGAGTCGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGAATTTGGGAGTAGTTGACGGGGACCCAAAATaagaaagtaaatta                                                                                                             >  1:531987/1‑129 (MQ=255)

                                 gAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACttttt                                                                                                            >  1:898358/1‑141 (MQ=255)

                                 gAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACtattt                                                                                                            >  1:1094564/1‑141 (MQ=255)

                                  aaaTTTTGATTTTATCGATCGATTACTGTTTGTAAAAAAGTAAAATTAGTCTTGGGAGTCGAACATAAATCAATGTCTAGACTTTATAGTGTGGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTc                                                                                                           <  2:207193/141‑1 (MQ=255)

                                    aTTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCtt                                                                                                         >  1:178291/1‑141 (MQ=255)

                                     ttttGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCttt                                                                                                        >  2:435713/1‑141 (MQ=255)

                                     ttctGACTTTAGCAATCTATGAGGGATTGTAAAAAAGTAAAACTATTCGTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTGGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCttt                                                                                                        <  1:107761/138‑1 (MQ=39)

                                          aTTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGaaa                                                                                                   >  1:197684/1‑141 (MQ=255)

                                           ttttAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAt                                                                                                  >  1:1075389/1‑141 (MQ=255)

                                           ttttAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAt                                                                                                  <  1:995731/141‑1 (MQ=255)

                                           ttttAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAt                                                                                                  <  2:619805/141‑1 (MQ=255)

                                           ttttAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACAGGGCCCCAACATAAAGAAATACTTTTTCTTTCGAGAt                                                                                                  >  1:393611/1‑141 (MQ=255)

                                            tttAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAtt                                                                                                 <  1:504113/141‑1 (MQ=255)

                                            tttAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAtt                                                                                                 <  1:121925/141‑1 (MQ=255)

                                              tAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAg                                                                                               <  1:657495/141‑1 (MQ=255)

                                                    tCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTc                                                                                         <  1:612656/141‑1 (MQ=255)

                                                       aTTAGTGATTGGAAAAAAGTAAAACTATTCTTGGGAGTCGAACATAAATCAGTGTCTAGACTCTATAGTGTTGTAGTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTta                                                                                      <  2:280087/141‑1 (MQ=255)

                                                        ttAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATTGTGTGGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTtat                                                                                     <  1:880160/141‑1 (MQ=255)

                                                        ttAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTtat                                                                                     <  1:424953/141‑1 (MQ=255)

                                                        ttAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTtat                                                                                     <  2:735077/141‑1 (MQ=255)

                                                        ttAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTtat                                                                                     <  1:978053/141‑1 (MQ=255)

                                                          aGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAATAAATACTTTTTCTTTAGAAATTAGTATTTCTTATAc                                                                                   <  2:6188/141‑1 (MQ=255)

                                                          aGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATAc                                                                                   <  2:975980/141‑1 (MQ=255)

                                                          aGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATAc                                                                                   >  2:70996/1‑141 (MQ=255)

                                                          aGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATAc                                                                                   >  1:546241/1‑141 (MQ=255)

                                                                 gTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGtt                                                                            >  2:714743/1‑141 (MQ=255)

                                                                 gTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAGTAGTATTTCTTATACATGCGtt                                                                            >  2:96276/1‑141 (MQ=255)

                                                                   aaaaaaGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGtttt                                                                          <  1:691237/141‑1 (MQ=255)

                                                                     aaaaGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTAc                                                                        >  1:711516/1‑141 (MQ=255)

                                                                      aaaGTAAAACTATTCTTGGGAGTCGGAAATAGATCAATGTCTAGACTCTATAGTGTTGTATTTGACTTGAGTTTGCGGGGCCCCAATATAAATAAATACTTTTTCGTTAGAAATTAGTATTTCTTATACATGAGTTTTACt                                                                       <  2:1005507/141‑1 (MQ=21)

                                                                       aaGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTc                                                                      >  1:159990/1‑141 (MQ=255)

                                                                       aaGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTc                                                                      <  2:29667/141‑1 (MQ=255)

                                                                        aGTAAAACTATTCTTGGGAGTCGGAAATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCa                                                                     <  1:371535/141‑1 (MQ=255)

                                                                         gTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATAAATGAGTTTTACTCAt                                                                    >  2:754463/1‑141 (MQ=255)

                                                                             aaCTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTAt                                                                <  1:66869/141‑1 (MQ=255)

                                                                             aaCTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTAt                                                                <  1:1115940/141‑1 (MQ=255)

                                                                              aCTATTCTTGGGAGTCGGACCTGCGTCAATGTCGAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTAtt                                                               >  1:582353/1‑141 (MQ=21)

                                                                               cTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATATTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTACACAAGAGTTTTACTCATGTATTc                                                              <  2:1197235/141‑1 (MQ=255)

                                                                               cTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAACTACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTc                                                              <  2:1197202/141‑1 (MQ=255)

                                                                               cTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTc                                                              <  2:898358/141‑1 (MQ=255)

                                                                               cTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTc                                                              <  1:250447/141‑1 (MQ=255)

                                                                                tATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTcc                                                             >  1:1034933/1‑141 (MQ=255)

                                                                                     ttGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTAAAACTCATGTAtaagaaata                                                        <  2:977754/141‑9 (MQ=25)

                                                                                      tGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTAtttt                                                       <  1:469017/141‑1 (MQ=255)

                                                                                      tGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTAtttt                                                       <  1:50893/141‑1 (MQ=255)

                                                                                           gTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAAt                                                  >  1:551013/1‑141 (MQ=255)

                                                                                              ggACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATaca                                               >  1:108770/1‑141 (MQ=255)

                                                                                                aCATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATAcaca                                             >  1:331032/1‑141 (MQ=255)

                                                                                                    aaaTCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATacactggat                                         <  2:1045251/141‑6 (MQ=255)

                                                                                                      aTCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCt                                       >  1:1036958/1‑141 (MQ=255)

                                                                                                        cAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCtgt                                     >  1:891555/1‑141 (MQ=255)

                                                                                                             tCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTa                                >  2:1104357/1‑141 (MQ=255)

                                                                                                                 gACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGa                            >  1:1134123/1‑141 (MQ=255)

                                                                                                                  gctctATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTCTTACTAATGTATTCCTCTTTTTAAATACACATTAGCTGTGTTTAATGAt                           <  2:886139/140‑1 (MQ=255)

                                                                                                                  aCTCTAATGTGTTGTATTTGGCTGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGAt                           <  2:461852/141‑1 (MQ=255)

                                                                                                                    tctATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATaa                         >  1:592356/1‑141 (MQ=255)

                                                                                                                    tctATAGTGTTGTATGTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATaa                         >  1:895340/1‑141 (MQ=255)

                                                                                                                     ctATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATaaa                        >  1:536518/1‑141 (MQ=255)

                                                                                                                      tataGTGTTGTATTTGGCAGTAGTTGACGGGGCCTCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAg                       <  2:1094564/141‑1 (MQ=255)

                                                                                                                      tataGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAg                       >  1:834681/1‑141 (MQ=255)

                                                                                                                        taGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGCGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGGGTTTACTGATAAAGaa                     >  1:1067121/1‑141 (MQ=255)

                                                                                                                        taGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGaa                     <  2:352193/141‑1 (MQ=255)

                                                                                                                        taGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGaa                     >  1:775244/1‑141 (MQ=255)

                                                                                                                          gtgtTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAAcc                   >  1:1103427/1‑141 (MQ=255)

                                                                                                                           tcttgtATTTCGCAGTAGTTGACGTGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTATTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTTTTTAATGATAAAGAACCa                  <  1:163313/139‑1 (MQ=255)

                                                                                                                               gtATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAACCACTAc              >  2:1077871/1‑141 (MQ=255)

                                                                                                                                 aTTTTGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAACCACTAcat            <  2:31873/141‑1 (MQ=255)

                                                                                                                                 aTTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTGTTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAACCACTAcat            <  2:735700/141‑1 (MQ=255)

                                                                                                                                 aTTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAACCACTAcat            <  1:1020837/141‑1 (MQ=255)

                                                                                                                                 aTTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATGTTTGAATACACATTAGCTGTGTTTAATGATAAAGAACCACTAcat            <  2:1193601/141‑1 (MQ=255)

                                                                                                                                  tttGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGCGTTTTACTCACGTATTCCTATCTTTAAATACACATTATCTGTGTTTAATGATAAAGAGCCACTAcatc           <  2:1161089/141‑1 (MQ=18)

                                                                                                                                  tttGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAACCACTAcctc           <  2:582353/141‑1 (MQ=255)

                                                                                                                                    tGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGGACCACTAcatcat         >  1:446318/1‑141 (MQ=255)

                                                                                                                                    tGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAACCACTAcatcat         >  1:201376/1‑141 (MQ=255)

                                                                                                                                        agtagtTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAACCACTAGATCATAAAt     >  2:21225/1‑141 (MQ=255)

                                                                                                                                         gtagtTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAACCACTACATCCTAAATc    >  1:540284/1‑141 (MQ=255)

                                                                                                                                          tagtCGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAACCACTACATCATAAATCt   <  1:1201039/141‑1 (MQ=255)

                                                                                                                                           agtTGCCGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAACCACTACATCATAAATCtt  <  1:714743/141‑1 (MQ=255)

                                                                                                                                           agtTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAACCACTACATCATAAATCtt  >  1:6417/1‑141 (MQ=255)

                                                                                                                                           agtTGAAGGGGCCCCAAAAAAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAACCACTACATCATAAATCtt  <  1:308334/141‑1 (MQ=255)

AAAATGAAATGTCGACTGTAGATAGTGGTGAAGGAAATTTTGATTTTAGCAATCTATTAGTGATTGTAAAAAAGTAAAACTATTCTTGGGAGTCGGACATAAATCAATGTCTAGACTCTATAGTGTTGTATTTGGCAGTAGTTGACGGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATACATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGTTTAATGATAAAGAACCACTACATCATAAATCTT  >  CP000730/2220522‑2220801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.