Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	2220469	2220486	18	3 [0]	[0] 3	USA300HOU_2091/atpC	hypothetical protein/F‑ATPase superfamily proton(H+)‑ or sodium (Na+)‑translocating F‑type ATPase epsilon subunit

CATATTGTCCGATATAATCCATTTTATCACCTCATAAGATTACTGTATTACATTGTACATGAAAAATTTAAATAATGATACAAAGTTTAATACCCGTTTTTAGTAAAGTTTAAGCTAACTTACTATATAATTCTTTTTACA  >  CP000730/2220328‑2220468                                                                                                                                             | cATATTGTCCGATATAATCCATTTTATCACCTCATAAGATTACTGTATTACATTGTACATGAAAAATTTAAATAATGATACAAAGTTTAATACCCGTTTTTAGTAAAGTTTAAGCTAACTTACTATATAATTCTTTTTACa  <  1:29371/141‑1 (MQ=255) cATATTGTCCGATATAATCCATTTTATCACCTCATAAGATTACTGTATTACATTGTACATGAAAAATTTAAATAATGATACAAAGTTTAATACCCGTTTTTAGTAAAGTTTAAGCTAACTTACTATATAATTCTTTTTACa  <  2:34906/141‑1 (MQ=255) cATATTGTCCGATATAATCCATTTTATCACCTCATAAGATTACTGTATTACATTGTACATGAAAAATTTAAATAATGATACAAAGTTTAATACCCGTTTTTAGTAAAGTTTAAGCTAACTTACTATATAATTCTTTTTACa  <  2:55736/141‑1 (MQ=255)                                                                                                                                             | CATATTGTCCGATATAATCCATTTTATCACCTCATAAGATTACTGTATTACATTGTACATGAAAAATTTAAATAATGATACAAAGTTTAATACCCGTTTTTAGTAAAGTTTAAGCTAACTTACTATATAATTCTTTTTACA  >  CP000730/2220328‑2220468

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑