Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007301,435,0690AC21.1% 306.9 / 17.0 149T142T (ACA→ACC) dapD2,3,4,5‑tetrahydropyridine‑2,6‑dicarboxylate N‑succinyltransferase
Reads supporting (aligned to +/- strand):  ref base A (36/80);  new base C (29/2);  total (66/83)
Fisher's exact test for biased strand distribution p-value = 1.39e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 155 total aligned reads displayed.

CACGAATTGAACCAGGTGCGTTTATTAGAGAACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTAGAAGGTGTACGTGTTGGTAAAGGTGC  >  CP000730/1434921‑1435215
                                                                                                                                                    |                                                                                                                                                  
cACGAATTGAACCAGGTGCGTTTATTAGAGAACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGTCGGGTTTGGCGAAGGTACAATGATTGATATGAATGCTCCTCTCGGTGGTCGTGCTACa                                                                                                                                                    >  1:396884/1‑149 (MQ=255)
cACGAATTGAACCAGGTGCGTTTATTAGAGAACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGAGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACa                                                                                                                                                    >  1:1327774/1‑149 (MQ=255)
 aCGAATTGAACCAGGTGCGTTTATTAGAGAACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACaa                                                                                                                                                   >  1:936726/1‑149 (MQ=255)
  cGAATTGAACCAGGTGCGTTTATTAGAGAACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAAc                                                                                                                                                  <  1:968006/149‑1 (MQ=255)
         aaCCAGGTGCGTTTATTAGAGAACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTaaa                                                                                                                                           >  1:627053/1‑149 (MQ=255)
          aCCAGGTGCGTTTATTAGAGAACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTaaaa                                                                                                                                          <  1:1668388/149‑1 (MQ=255)
                tGCGTTTATTAGAGAACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGGCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTAc                                                                                                                                    <  1:330652/149‑1 (MQ=255)
                tGCGGTTATTAGAGAACAAGCCATTATTGAAGATGGTGCTGGCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTAc                                                                                                                                    <  1:588681/149‑1 (MQ=255)
                        ttaGAGAACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAggg                                                                                                                            >  1:840791/1‑149 (MQ=255)
                        ttaGAGAACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGCGGTATCATTGGAAAAAAAATACATGTAggg                                                                                                                            >  2:960876/1‑149 (MQ=255)
                        ttaGAGAACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGCGGTACAATTAGAAAAAAAGTAGAAGTAagg                                                                                                                            >  2:113087/1‑149 (MQ=255)
                        ttaGAGAACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATGGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGCCGTACAACTAGTAAAAAAGTACATGTAggg                                                                                                                            >  2:1478024/1‑149 (MQ=255)
                          agagAACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGCGGTATCATTGATAAAAAAGTACATGGAGGGGc                                                                                                                          >  2:207021/1‑149 (MQ=255)
                            agaACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAGTGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTg                                                                                                                        >  1:251445/1‑149 (MQ=255)
                            agaACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGGTATCATTGATAAAAAAGTaagtgtgacgatgg                                                                                                                        >  2:1045478/1‑136 (MQ=255)
                            agaACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGGTACAATTGGTAAAAAAGTACATGTAGGGGCTg                                                                                                                        >  2:1129516/1‑149 (MQ=255)
                            agaACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGGTg                                                                                                                        >  1:573920/1‑149 (MQ=255)
                              aaCAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGgc                                                                                                                      <  1:1382779/149‑1 (MQ=255)
                              aaCAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGgc                                                                                                                      >  1:603818/1‑149 (MQ=255)
                                 aaGCTAATATTGAAGACGGTGCTGTCGTTATCATTGTCGGAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCa                                                                                                                   <  2:1371531/149‑1 (MQ=255)
                                 aaGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCa                                                                                                                   <  1:994069/149‑1 (MQ=255)
                                   gCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGt                                                                                                                 <  1:682815/149‑1 (MQ=255)
                                    ccATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTa                                                                                                                <  1:86773/149‑1 (MQ=255)
                                    ccATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTa                                                                                                                <  1:441102/149‑1 (MQ=255)
                                       ttattGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTa                                                                                                             >  1:204269/1‑149 (MQ=255)
                                        tattGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAg                                                                                                            <  1:933223/149‑1 (MQ=255)
                                        tattGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAg                                                                                                            <  1:153008/149‑1 (MQ=255)
                                          ttGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCa                                                                                                          >  1:849515/1‑149 (MQ=255)
                                          ttGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTCGTACCACTAGAAAAAAAGTACATGTAGGGGCTGGCGCAGTATTAGCa                                                                                                          >  2:640127/1‑149 (MQ=255)
                                          ttGAAGAGGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGACTACTACTGGCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCa                                                                                                          >  1:1253563/1‑149 (MQ=255)
                                             aaGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGCGGTACCACTAGTAAAAAAATACATGTAGGGGCTGCGGCAGGATGAggaagg                                                                                                       >  2:625111/1‑144 (MQ=255)
                                              aGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGgtg                                                                                                      >  1:1086867/1‑149 (MQ=255)
                                                   gcgCTGTCGTTATGATGGGCGCCACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGAtt                                                                                                 <  1:67869/147‑1 (MQ=255)
                                                   gTGCTGTCGTTTTGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGGTATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGAtt                                                                                                 <  1:1298750/149‑1 (MQ=255)
                                                     gcgattgatATGGTCGGCGAAACAATTAATATTGGTGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGa                                                                                               <  2:387997/141‑1 (MQ=255)
                                                     gCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGa                                                                                               <  1:580091/149‑1 (MQ=255)
                                                      cTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGCCGTATCATTAAAAAAAAAATACATGAAGGGGCAGTCGCAGTATTAGCAGGTGTGATTGaa                                                                                              >  2:1206080/1‑149 (MQ=255)
                                                          ttttacaaatggCTCAACAAATAATATTGGCGGAGTCGTTGGCGGAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGAAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAAcccc                                                                                          <  2:921418/139‑1 (MQ=255)
                                                          cataacgatgGCCGCAACAATCAATATTGGCGCAGTCGATGGCGAAGGTACAATGATTAATATGTATGCTACCCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACACGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAAcccc                                                                                          <  2:1246796/143‑1 (MQ=255)
                                                          cGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGTCGAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAAcccc                                                                                          <  1:1617629/149‑1 (MQ=255)
                                                          cGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAAcccc                                                                                          <  1:1290426/149‑1 (MQ=255)
                                                          cGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAAcccc                                                                                          <  1:1120267/149‑1 (MQ=255)
                                                                  tgGGCGCAACAATTAATGTTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCGGTATTAGCAGGTGTGATTGAACCCCCTAGTGCt                                                                                  >  1:1261262/1‑149 (MQ=255)
                                                                  tgGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGCCGTATCATTAAAAAAAAAAAACATGTAGGGGCTGGCGCAGTATTACCAGTAGTGATTGAACCCCCTAGGGCt                                                                                  >  2:948795/1‑149 (MQ=255)
                                                                    ggCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACAGGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTc                                                                                >  1:473948/1‑149 (MQ=255)
                                                                    ggCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGCCGTATCATTAAAAAAAAAAAACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATAGAACCACATAGTGGTTc                                                                                >  2:128220/1‑149 (MQ=255)
                                                                    ggCGCAACAATTAATATTCGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTc                                                                                >  1:1246138/1‑149 (MQ=255)
                                                                     gcgcAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGCCGTACCACTAAAAAAAAAGTACATGCGGGGGCGGGCGACTGATTAGCAGGAGTGATGGAACCCCCTAGGGATTcc                                                                               >  2:771141/1‑148 (MQ=255)
                                                                      ggcAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACGGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCAc                                                                              <  1:1519675/148‑1 (MQ=255)
                                                                         aacatTGAATACTGGGGCAGTCGTGGGCGAAGGTACAATGATTGATATGAATGCTGCTCTCGGTGGTCGTGCTACAACTGGGAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCgg                                                                           <  2:912304/149‑1 (MQ=255)
                                                                           caaTTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGtt                                                                         <  1:738001/149‑1 (MQ=255)
                                                                                 atatTTGCGCAGGCGTTGGCGAAGGTACATGGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGAAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATc                                                                   <  2:194493/149‑1 (MQ=255)
                                                                                 atatTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATc                                                                   <  2:671703/149‑1 (MQ=255)
                                                                                 atatTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGCGGTACCATTAAAAAAAAAATACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCCCGTGCTTCACAGGTTGTAAtg                                                                   >  2:284389/1‑148 (MQ=255)
                                                                                       gcgcAGTCGTTGGCGAAGGTACAATGATGCATACGAATGCGACGCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGCAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGgat                                                             <  1:316872/149‑1 (MQ=255)
                                                                                        ggcAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGgatg                                                            <  1:1667953/148‑1 (MQ=255)
                                                                                        cgcAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGCCGTATCATTAAAAAAAAAAAACATGTAGGGGCTGGCGCCGTATTAGCAGGCTTGATAGAACCCACCAGTGCCTCACCGCtttgaatacagcccc                                                            >  2:1715554/1‑136 (MQ=255)
                                                                                          cAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGgatgat                                                          <  1:1520537/149‑1 (MQ=255)
                                                                                           tggcGTTGGCGTTGTTGCAATGATTGTTATGAATGCTACTCTCGGTGGTCGTGCTACGACTGGTAAAAATGTACATGTTGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGatgatg                                                         <  2:1515999/146‑1 (MQ=255)
                                                                                            tacGTTGGGGGACGGACAATGATGGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGt                                                        <  2:527367/147‑1 (MQ=255)
                                                                                            gTCGTTGGGGAAGGTACAACGATTGATATGCATGCTACTCTCGGTGGTCGTGCTACCACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGt                                                        <  1:1190932/149‑1 (MQ=255)
                                                                                             gcGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTa                                                       <  1:1175365/148‑1 (MQ=255)
                                                                                              tctttgccgtggTAAAATGATTGTGATGAGTGGTACTCTGGGTGGTGGTTCTACAACTGGTAAAAATGTACAGGTAGGGGCTGTCGTCGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTAt                                                      <  2:320399/139‑1 (MQ=255)
                                                                                                  ggCGAAGGGACAATGATTGAAATGAATGCTACGCTCGGTGGTCGTTCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTCAt                                                  <  2:1309500/149‑1 (MQ=255)
                                                                                                   gCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGCCGTATCATTGAAAAAAAAGTACATGTAGAGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCATAGTGCTTCACCGGTTGTAAGCGAGGatgatgacttgatc                                                 >  2:38857/1‑141 (MQ=255)
                                                                                                         gTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCa                                           <  2:1631956/149‑1 (MQ=255)
                                                                                                         gTACAATAATTGATATGAATGCTCCTCTCGGTGGTCGTGCTACAACTGGTAAAAATGCACATGTCGGGGCTGGCGCAGTATTGGCGGGGGTGATGGTACCCCCTAGTGCTGCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCa                                           <  2:1214811/149‑1 (MQ=255)
                                                                                                             aaTGATTGATATGAATGCTGCTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATg                                       <  1:1691301/149‑1 (MQ=255)
                                                                                                                  ttgatATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGtt                                  <  1:120139/149‑1 (MQ=255)
                                                                                                                   tgatATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAGTGTACATGTAGGGGATGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTa                                 >  1:1531882/1‑149 (MQ=255)
                                                                                                                   tgatATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTa                                 >  1:101754/1‑149 (MQ=255)
                                                                                                                   tgatATGAATGCTACTCTCGGTGGTCGCCGTATCATTAAAAAAAAAATACATGTAGGGGCTGGCGCAGTATTAGCAAGTGAGATTGAACCCCCGAGAGCTTCACCGGTGATCATCGAGGGGGATGTATTAATCGGTGCcaaacaagtac                                 >  2:887693/1‑141 (MQ=255)
                                                                                                                     atatGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGAGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGCATGATGTATTAATCGGTGCAAATGCAGTTAtt                               >  1:1154945/1‑149 (MQ=255)
                                                                                                                     atatGAATGCTACTCTCGGTGGTCGTGCGACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGAATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATATATTAATCGGTGCAAATGCAGTTAtt                               >  1:1050703/1‑149 (MQ=255)
                                                                                                                     atatGAATGCTACTCTCGGTGGTCGCGGTATCATTAAAAAAAAAATACATGTAGGGGATGGCGCAGTATTAGCAGGTGTGATTGAACACCCTAGTGCTTCACCGGTTATAATCGCGGATGAGGTATTCATCGGTATAGATGCAGTTAtt                               >  2:1241556/1‑149 (MQ=255)
                                                                                                                     atatGAATGCTACTCTCGGTGGTCGCCGTATCATTAAAAAAAAAAAACATGTAGGGGCTGGCGCAGTATTAGCAGGAGTGATTGAACCCCCTAGTGCTTCACCGGATATAATCGAGAAAGATGGATTAATCGGTACACAtagagtgatg                               >  2:1618069/1‑140 (MQ=255)
                                                                                                                       atGGATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGAAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTAtttt                             <  2:507343/149‑1 (MQ=255)
                                                                                                                       atGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTAtttt                             <  1:1024616/149‑1 (MQ=255)
                                                                                                                        tGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTa                            <  1:1442563/149‑1 (MQ=255)
                                                                                                                        tGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTa                            >  1:451148/1‑149 (MQ=255)
                                                                                                                        tGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGAGGTATTAATCGGTGCAAATGCAGTTATGTTa                            >  1:1485218/1‑149 (MQ=255)
                                                                                                                        tGAATGCTACTCTCGGTGGTCGCCGTATCATTAAAAAAAAAGTACATGTAGGGGCTGGAGCAGTATTAGCAGGTGTGATAGAACCCCCTAGTGCTTCCCCGGTTACAATCGAAGATGAGGTAGTAATCGGTGCAACTGCAGTTATTTTa                            >  2:1335268/1‑149 (MQ=255)
                                                                                                                        tGAATGCTACTCTCGGTGGTCGCCGTATCATTAAAAAAAAAATAAATGTAGGGGCTGGCGCAGTTTTAGCAAGTGTGATTGAACCCCCTAGGGCTTCACCGGTTATAATCGAGGATGAAGGAATAAACGGTGCAAATGCAGTTATTTTa                            >  2:562328/1‑149 (MQ=255)
                                                                                                                          aaTGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTAGa                          >  1:753617/1‑149 (MQ=255)
                                                                                                                          aaTGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTAGa                          >  1:1569353/1‑149 (MQ=255)
                                                                                                                          aaTGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTGCACCGGTTATAATCGAGGATGACGTACTAATCGGTGCAAACGCAGTCATTTTAGa                          >  1:1401707/1‑149 (MQ=255)
                                                                                                                          aaTGCTACTCTCGGTGGTCGCCGTATCATTAAAAAAAAAGTACATGTAGGGGCTGGCGCCGTATTAGCAGGTGTGATTGAACACCGCAGAACTTCAACGAGTATAATCGAGGACGATGTAATAAACGGTGAAAATGCAGTTAGTTTaaa                          >  2:611104/1‑147 (MQ=255)
                                                                                                                          aaTGCTACTCTCGGTGGTCGCCGTATCATTAAAAAAAAAATACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCAACGGTTATAATCGAGGATGAGGTATTAATCGGGGCAAATGCAGTTAttttgaa                          >  2:1425763/1‑146 (MQ=255)
                                                                                                                             gCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTAGAAgg                       >  1:536968/1‑149 (MQ=255)
                                                                                                                                  tctcGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTAGAAGGTGTAc                  >  1:551517/1‑149 (MQ=255)
                                                                                                                                    tcGGTGGGCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTAGAAGGTGTACgt                <  1:1478024/149‑1 (MQ=255)
                                                                                                                                        gggtCGGGCTACACCTGGGAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTAGAAGGTGTACGTGTTg            <  2:34248/148‑1 (MQ=255)
                                                                                                                                         tgtCGTGCTACACCTGTTAAAAAGGTACATGTGGGGGCTGGCGCAGTATTAGCTGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATATTCGAGGATGATGTATTAATCGGTGCAAATGCAGTTAGTTTAGAAGGTGTACGTGTTgg           <  2:691444/148‑1 (MQ=255)
                                                                                                                                         ggtCGTGATACAACTGGTAAAAATGTACACGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTAGAAGGTGTACGTGTTgg           <  2:90494/149‑1 (MQ=255)
                                                                                                                                         gggtgTGATACCACGGGTAAAAATGTACAGGTAGGGGCTGGGGCAGTATTAGCAGGGGGGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAAGCGGTGCAAATGCAGTTATTTTAGAAGGTGTACGTGTTgg           <  1:14005/145‑1 (MQ=255)
                                                                                                                                           tCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTAGAAGGTGTACGTGTTGGTa         <  1:536024/149‑1 (MQ=255)
                                                                                                                                            cGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTAGAAGGTGTACGTGTTGGTaa        >  1:1128307/1‑149 (MQ=255)
                                                                                                                                             gTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTAGAAGGTGTACGTGTTGGTaaa       <  1:38857/149‑1 (MQ=255)
                                                                                                                                              tcaaaCAACCGGAAAAAATATACATGTAGGGGCTGGCGCAGTATGAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATCTTAGAAGGTGTACGTGTTGGTAAAg      <  2:979075/145‑1 (MQ=255)
                                                                                                                                                  aCAACTGGTAAAAATGGACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTAGAAGGTGTACGTGTTGGTAAAGGTGc  <  2:204269/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
CACGAATTGAACCAGGTGCGTTTATTAGAGAACAAGCCATTATTGAAGATGGTGCTGTCGTTATGATGGGCGCAACAATTAATATTGGCGCAGTCGTTGGCGAAGGTACAATGATTGATATGAATGCTACTCTCGGTGGTCGTGCTACAACTGGTAAAAATGTACATGTAGGGGCTGGCGCAGTATTAGCAGGTGTGATTGAACCCCCTAGTGCTTCACCGGTTATAATCGAGGATGATGTATTAATCGGTGCAAATGCAGTTATTTTAGAAGGTGTACGTGTTGGTAAAGGTGC  >  CP000730/1434921‑1435215

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑