New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 1454018 =96 (0.730)8 (0.070) 5/270 8.6 8.1% intergenic (‑97/+187) sucA/arlS oxoglutarate dehydrogenase (succinyl‑transferring) E1/sensor histidine kinase
?CP000730 1454048 = 94 (0.780)intergenic (‑127/+157) sucA/arlS oxoglutarate dehydrogenase (succinyl‑transferring) E1/sensor histidine kinase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GATCAATTTTTTAAGTACACATTAGCTGTGACTAATGTATAAGAACAACTATAAAACAAATAAACAGTGGTTCTTTATCATTTCTGTTGTACTCCCAAAATTTACAATAAAATACATCTATAAACCTAGAAGAATCAACGCTTTTGTTGATTCTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/1454174‑1454018
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgattcttctAGGTTTATAGATGTATTTTATTGTAAATTTTGGGAGTACAACAGAAATGATAAAGAACCACTGTTTATTTGTTTTATAGTTGTTCTTATACATTAGTCACAGCTAATGTGTACTTAAAAAATTGATCCTATGACTTTGATTGACGT  >  CP000730/1454048‑1454193
                                                                                                                                                                                                                                                                                                               
GATCAATTTTTTAAGTACACATTAGCTGTGACTAATGTATAAGAACAACTATAAAACAAATAAACAGTGGTTCTTTATCATTTCTGTTGTACTCCCAAAATTTACAATAAAATACATCTATAAACCTAGAAGAATCAACGCTTTTGTT                                                                                                                                                             >  1:874608/1‑148
 ATCAATTTTTTAAGTACACATTAGCTGTGACTAATGTATAAGAACAACTATAAAACAAATAAACAGTGGTTCTTTATCATTTCTGTTGTACTCCCAAAATTTACAATAAACTACATCTATAAACCTAGAAGAATCACCGCTTTTGTTc                                                                                                                                                            >  2:1243197/1‑147
  TCAATTTTTTAAGTACACATTAGCTGTGACTAATGTATAAGAACAACTATAAAACAAATAAACAGTGGTTCTTTATCATTTCTGTTGTACTCCCAAAATTTACAATAAAATACATCTATAAACCTAGAAGAATCAACGCTTTTGTTGA                                                                                                                                                           >  1:510469/1‑148
    AATTTTTTAAGTACACATTAGCTGTGACTAATGTATAAGAACAACTATAAAACAAATAAACAGTGGTTCTTTATCATTTCTGTTGTACTCCCAAAATTTACAATAAAATACATCTATAAACCTAGAAGAATCAACGCTTTTGTTGATT                                                                                                                                                         <  1:147964/148‑1
       TTTTTAAGTACACATTAGCTGTGACTAATGTATAAGAACAACTATAAAACAAATAAACAGTGGTTCTTTATCATTTCTGTTGTACTCCCAAAATTTACAATAAAATACATCTATAAACCTAGAAGAATCAACGCTTTTGTTGATTCTT                                                                                                                                                      <  1:1158403/148‑1
       TTTTTAACTACACATTAGCTGTGACTAATGTATAAGAACAACTATAAAACAAATAAACAGTGGTTCTTTATCATTTCTGTTGTACTCCCAAAATTTACAATAAAATACATCTATAAACCTAGAAGAATCAACGCTTTTGTTGATTCTT                                                                                                                                                      <  2:7525/148‑1
                                 AATGTATAAGAACAACTATAAAACAAATAAACAGTGGTTCTTTATCATTTCTGTTGTACTCCCAAAATTTACAATAAAATACATCTATAAACCTAGAAGAATCAACGCTTTTGTTGATTCTTCTAGGTTTATAGATGTATTTTATTGT                                                                                                                            >  1:142200/1‑148
                                 AATGTATAAGAACAACTATAAAACAAATAAACAGTGGTTCTTTATCATTTCTGTTGTACTCCCAAAATTTACAATAAAATACATCTATAAACCTAGAAGAATCAACGCTTTTGTTGATTCTTCTAGGTTTATAGATGTATTTTATTGT                                                                                                                            >  1:1082526/1‑148
                                                  ATAAAACAAATAAACAGTGGCTCTTTATCATTTCTGTTGTACTCCCAAAATTTACAATAAAATACATCTATAAACCTAGAAGAATCAACGCTTTTGTTGATTCTTCTAGGTTTATAGATGTATTTTATTGTAAATTTTGGGTGTACAA                                                                                                           >  1:997780/1‑148
                                                                                      TTGTACTCCCAAAATTTACAATAAAATACATCTATAAACCTAGAAGAATCAACGCTTTTGTTGATTCTTCTAGGTTTATAGATGTATTTTATTGTAAATTTTGGGGGTACAACAGAAATGATAAAGAACCACTGTTTATTTGTTTTAT                                                                       <  2:997780/148‑1
                                                                                                       ACAATAAAATACATCTATAAACCTAGAAGAATCAACGCTTTTGTTGATTCTTCTAGGTTTATAGATGTATTTTATTGTAAATTTTGGGAGTACAACAGAAATGATAAAGAACCACTGTTTATTTGTTTTATAGTTGTTCTTATACATT                                                      <  2:142200/148‑1
                                                                                                       ACAATAAAATACATCTATAAACCTAGAAGAATCAACGCTTTTGTTGATTCTTCTAGGTTTATAGATGTATTTTATTGTAAATTTTGGGAGTACAACAGAAATGATAAAGAACCACTGTTTATTTGTTTTATAGTTGTTCTTATACATT                                                      <  2:1082526/148‑1
                                                                                                                             CTAGAAGAATCAACGCTTTTGTTGATTCTTCTAGGTTTATAGATGTATTTTATTGTAAATTTTGGGAGTACAGCAGAAATGATAAAGAACCACTGTTTATTTGTTTTATAGTTGTTCTTATACATTAGTCACAGCTAATGTGTACTTg                                >  2:838872/1‑147
                                                                                                                             CTAGAAGAATCAACGCTTTTGTTGATTCTTCTAGGTTTATAGATGTATTTTATTGTAAATTTTGGGAGTACAACAGAAATGATAAAGAACCACTGTTTATTTGTTTTATAGTTGTTCTTATACATTAGTCACAGCTAATGTGTACTTA                                >  1:654010/1‑148
                                                                                                                                                           CTAGGTTTATAGATGTATTTTATTGTAAATTTTGGGAGCACAACAGAAATGATAAAGAACCTCTGTTTATTTGTTTTATAGTTGTTCTTATACATTAGTAACAGCTAATGTGTACTTAAGAAATTGATCCTATGACTTTGATTGATGT  >  2:861154/1‑148
                                                                                                                                                           CTAGGTTTATAGATGTATTTTATTGTAAATTTTGCGCGTACAACAGAAATGATAAAGAACCACTGTTTCTTTGTTTTATAGTTGTTCTTATACATTAGTCATAGCTAATGTGTATTTATACACTTGAACATATACCTTTGCTTcgatc  >  2:1093064/1‑143
                                                                                                                                                                                                                                                                                                               
GATCAATTTTTTAAGTACACATTAGCTGTGACTAATGTATAAGAACAACTATAAAACAAATAAACAGTGGTTCTTTATCATTTCTGTTGTACTCCCAAAATTTACAATAAAATACATCTATAAACCTAGAAGAATCAACGCTTTTGTTGATTCTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/1454174‑1454018
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgattcttctAGGTTTATAGATGTATTTTATTGTAAATTTTGGGAGTACAACAGAAATGATAAAGAACCACTGTTTATTTGTTTTATAGTTGTTCTTATACATTAGTCACAGCTAATGTGTACTTAAAAAATTGATCCTATGACTTTGATTGACGT  >  CP000730/1454048‑1454193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.