Predicted mutation
evidence seq id position mutation annotation gene description
RA CP000730 584,121 G→T intergenic (+205/‑67) rplA → / → rplJ ribosomal protein L1/ribosomal protein L10

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730584,1210GT100.0% 406.2 / NA 132intergenic (+205/‑67)rplA/rplJribosomal protein L1/ribosomal protein L10
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (83/49);  total (83/49)

Only 100 of 132 total aligned reads displayed.

CAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCGTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAAATTCAGTTTCAACAGT  >  CP000730/583978‑584264
                                                                                                                                               |                                                                                                                                               
cAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTggg                                                                                                                                             <  2:985829/148‑1 (MQ=255)
cAATAAGTAATTTCCAAGTTATACTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTggg                                                                                                                                             >  1:1040072/1‑148 (MQ=255)
   tAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCACGCACTTTTTGCCTTGGGTAg                                                                                                                                          >  1:1000122/1‑148 (MQ=255)
   tAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTGATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAg                                                                                                                                          >  2:850549/1‑148 (MQ=255)
      gTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGaaa                                                                                                                                       >  1:799429/1‑148 (MQ=255)
         aTTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTg                                                                                                                                    <  2:1246228/148‑1 (MQ=255)
              cAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTAACCTTCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCtttt                                                                                                                               >  2:260008/1‑148 (MQ=255)
               aaGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCttttt                                                                                                                              >  1:381507/1‑148 (MQ=255)
               aaGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCttttt                                                                                                                              >  1:1368189/1‑148 (MQ=255)
               aaGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCttttt                                                                                                                              <  1:521815/148‑1 (MQ=255)
                aGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCtttttt                                                                                                                             >  2:592254/1‑148 (MQ=255)
                aGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCtttttt                                                                                                                             >  2:249858/1‑148 (MQ=255)
                aGTGATATTACGTAGTGTGATTAGTTTACCTAAGACAGTAGGAGTTATTTGTAGCTTAAAATTTATCCTGCCGAGGCTAAATTTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTGGGGTGGAAAGTGGtttggt                                                                                                                             <  2:307658/148‑4 (MQ=255)
                  ttATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTtta                                                                                                                           <  1:890655/148‑1 (MQ=255)
                        tACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGATCGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAAtt                                                                                                                     <  2:851419/148‑1 (MQ=255)
                         aCTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTTGAAAGTGCTTTTTTTATTAAttt                                                                                                                    >  2:811134/1‑148 (MQ=255)
                          cTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCCATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAAtttt                                                                                                                   >  1:753170/1‑148 (MQ=255)
                           ttATTGTGATTATTTTACCTAAGTCAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTa                                                                                                                  <  1:3787/148‑1 (MQ=255)
                              ttGTGATTATTTTAGCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTaaaa                                                                                                               <  2:142771/148‑1 (MQ=255)
                              tctggATTAATTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTCATGATCTATGATCTTTCAAGCACTTTTTGCTTTGGGTAGAAAGCGCTTTTTTAATAAATATAaaaa                                                                                                               <  2:94101/144‑1 (MQ=255)
                                 tgATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTaaaaaaa                                                                                                            >  1:82399/1‑148 (MQ=255)
                                 tgATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTaaaaaaa                                                                                                            >  1:340319/1‑148 (MQ=255)
                                 tgATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTaaaaaaa                                                                                                            >  1:678394/1‑148 (MQ=255)
                                  gATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTTTTGTTTTTaaagaagg                                                                                                           >  2:294232/1‑146 (MQ=255)
                                  gATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAg                                                                                                           >  1:475348/1‑148 (MQ=255)
                                  gATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAg                                                                                                           >  1:743440/1‑148 (MQ=255)
                                    ttattTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAgaa                                                                                                         >  2:815403/1‑146 (MQ=255)
                                      attTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATCGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCAcc                                                                                                       >  1:946429/1‑148 (MQ=255)
                                       ttttACCGAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCa                                                                                                      <  2:1342707/148‑1 (MQ=255)
                                        tttACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCaa                                                                                                     >  1:118359/1‑148 (MQ=255)
                                        tttACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCaa                                                                                                     >  1:1303951/1‑148 (MQ=255)
                                        tttACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGGAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCaa                                                                                                     >  1:1088420/1‑148 (MQ=255)
                                         ttACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCaaa                                                                                                    <  1:723710/148‑1 (MQ=255)
                                             cTAAGACTGTATGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTTAAATTGACTTGTACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTTTTAATTTTAAAAAAAGAAAAAAAAAtt                                                                                                <  2:966290/148‑1 (MQ=255)
                                               aaGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTa                                                                                              <  1:1154975/148‑1 (MQ=255)
                                                 gACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTaaa                                                                                            >  2:250779/1‑148 (MQ=255)
                                                 gACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTaaa                                                                                            >  2:529895/1‑148 (MQ=255)
                                                 gACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGACGATGCAAATTACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCACAAATTTaaa                                                                                            >  1:331689/1‑148 (MQ=255)
                                                     gTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATGGACTTGAACGTGATAATCTATGATCTTGCAAGCACGTTTTGCCTTGGGTAGAAAGTGCTGTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGa                                                                                        <  2:480446/148‑1 (MQ=255)
                                                      tAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAg                                                                                       >  1:215216/1‑148 (MQ=255)
                                                        ggAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGgt                                                                                     >  1:236663/1‑148 (MQ=255)
                                                          aGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGgtgt                                                                                   <  1:1346187/148‑1 (MQ=255)
                                                          aGTTATTTATAACTTAAAATTTATCCTACCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGgtgt                                                                                   >  1:844590/1‑148 (MQ=255)
                                                           gTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTCAATGGAGGTGTc                                                                                  >  1:275543/1‑148 (MQ=255)
                                                           gTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTc                                                                                  >  1:135729/1‑148 (MQ=255)
                                                            ttatttatAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCt                                                                                 <  2:1312500/148‑1 (MQ=255)
                                                            ttatttatAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCt                                                                                 <  2:901714/148‑1 (MQ=255)
                                                            ttagttatAACTTAAAATTTACCCTGCCGAGGCTAAAATTGACTTTGACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAATTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATGTAAATGGAGGTGTCt                                                                                 <  2:600149/148‑1 (MQ=255)
                                                               tttatAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGaa                                                                              >  1:691345/1‑148 (MQ=255)
                                                                   taACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTc                                                                          <  1:340088/148‑1 (MQ=255)
                                                                       ttAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTGTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCt                                                                      <  2:1040072/148‑1 (MQ=255)
                                                                          aaaTTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATc                                                                   >  1:501245/1‑148 (MQ=255)
                                                                             tttATCCTGCCGAGGCTAAAATTGACTTGAACGTGACGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCAtt                                                                <  1:847108/148‑1 (MQ=255)
                                                                              ttATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTCTGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAACGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTTCTTTCATTg                                                               >  2:1237180/1‑148 (MQ=255)
                                                                                 tCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAg                                                            >  1:849812/1‑148 (MQ=255)
                                                                                 tCCTGCCGAGGCTAAAATTGACTTGAACGAGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGAGTAGAAAGTGCTTTCTTTATTAATTTTAAAAAAAGCACCAAAAATCTGAATGAAGATATCTGAATATATGCAACCATAGAAg                                                            >  1:729269/1‑148 (MQ=255)
                                                                                  ccTGCCGGGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGc                                                           <  1:921034/148‑1 (MQ=255)
                                                                                  ccTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGc                                                           >  2:852202/1‑148 (MQ=255)
                                                                                  ccTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGc                                                           <  1:753778/148‑1 (MQ=255)
                                                                                  ccTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGc                                                           >  1:780724/1‑148 (MQ=255)
                                                                                   cTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTTTTTTTTTTTGAAAGTGCTTTTTGTATTAATTTTAAAAAAAGCAGCAAGAATTTAAATGGGGGTGTCTGAAGGTCTGCTATCGTTGAGGcg                                                          >  2:1038724/1‑147 (MQ=255)
                                                                                   cTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAACGTGTTTTTTTTTTTAATTGTAAAAAAAGTACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGTTATCATTGAAGCt                                                          >  2:817866/1‑148 (MQ=255)
                                                                                   cTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCt                                                          >  1:1101468/1‑148 (MQ=255)
                                                                                   cTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACGTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGGAGCt                                                          >  1:676892/1‑148 (MQ=255)
                                                                                     gCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTaa                                                        >  1:1373610/1‑148 (MQ=255)
                                                                                       cGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTaaaa                                                      >  1:1076866/1‑148 (MQ=255)
                                                                                       cGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTAAAGCTcaac                                                      >  1:1202416/1‑147 (MQ=255)
                                                                                         aGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTATTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGGCTGCTATAATTGAAGCTaaaaaa                                                    >  2:153392/1‑148 (MQ=255)
                                                                                                aaTTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAg                                             >  1:431393/1‑148 (MQ=255)
                                                                                                  ttGGCTTGAACATAATGATATATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTCAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGtt                                           <  1:446096/148‑1 (MQ=255)
                                                                                                  ttGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGtt                                           <  1:126206/148‑1 (MQ=255)
                                                                                                   tGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTtg                                          >  2:739114/1‑148 (MQ=255)
                                                                                                   tGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTT‑TTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTtga                                         >  1:632091/1‑148 (MQ=255)
                                                                                                        tGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAGTATTAAAAAAAGCACCAAAAAATTAGATGGCGGATGCTGGATGTCTGCTATCATTTAAGCTAAAAAACAACTAGTGGATaaa                                     >  2:411802/1‑148 (MQ=255)
                                                                                                         gAACGTGATGATCTATGATCTTTCAAGCACTCTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGaaa                                    <  1:403821/148‑1 (MQ=255)
                                                                                                             gTGATGATCTATGATCTTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGCAGCTAAAAAACAACTAGTTGATAAAATTGc                                >  1:285475/1‑148 (MQ=255)
                                                                                                               gatgatCTATGATCTTTCAAGCAATTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCGGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTg                              <  2:1172276/148‑1 (MQ=255)
                                                                                                                atgatctatgatctTTCAAGCACTTTTTGCCTTGGGTAGAAATTTCTTTTTTTAAAAAAAAAAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGa                             <  2:1291687/148‑1 (MQ=255)
                                                                                                                 tgatctatgatctTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAg                            <  2:340319/148‑1 (MQ=255)
                                                                                                                   atctattatctTTCAAGCACTTTTTGCCTTGGGTTGAAAGGGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATGTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGt                          <  1:541029/148‑1 (MQ=255)
                                                                                                                    tctatgatctTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTa                         <  2:215216/148‑1 (MQ=255)
                                                                                                                    tcgatgatctTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTa                         <  2:1042277/145‑1 (MQ=255)
                                                                                                                     ctatgatctTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTAc                        <  2:135643/148‑1 (MQ=255)
                                                                                                                       atgatctTTCAAGCACTTTTTGCCTTGGGTAGAAATTGCTTTTTTTATTAATTTTAAAAACAGAACCAAAAATATAAATGGACGTGTCTGTAAGTCTCCTATCATTGCATCTAGCCACCATCTTGTTGATGCAAttccgcaggaccta                      >  2:1198125/1‑136 (MQ=255)
                                                                                                                        tgatctTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAACTGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAAATAGTTGATGAAATTGCGGAGGGACTAt                     >  1:113937/1‑148 (MQ=255)
                                                                                                                        tgatctTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACAAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTAt                     >  1:641658/1‑148 (MQ=255)
                                                                                                                        tgatctTTCAAGCACTTTTTGCCTGGGATAGAAAGTGCTTTTTTTAGTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTAt                     >  1:785319/1‑148 (MQ=255)
                                                                                                                         gatctTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTCTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATTTCTGCAATCATTGAAGCTAAAAAGCAACTAGTTAATGAAATTGCTGACGTACTAtt                    >  2:761674/1‑147 (MQ=255)
                                                                                                                          atctTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCa                   >  2:916754/1‑148 (MQ=255)
                                                                                                                          atctTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCa                   >  2:1168542/1‑148 (MQ=255)
                                                                                                                           tctTTCAAGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAACTTTGTTTGGAAGTATGTTTTTTGCTTCTTTCTTAGAAGTGATAAAACAACTAGTTGTTGAATTTTCGGAGTTACTAGCaa                  <  2:641572/148‑1 (MQ=255)
                                                                                                                                 aaGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAAATTCAg            >  1:338647/1‑148 (MQ=255)
                                                                                                                                 aaGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAAATTCAg            >  1:628302/1‑148 (MQ=255)
                                                                                                                                  aGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAAATTCAGt           >  1:1056638/1‑148 (MQ=255)
                                                                                                                                  aGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAAATTCAGt           >  2:734580/1‑148 (MQ=255)
                                                                                                                                  aGCACTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAAATTCAGt           >  1:300433/1‑148 (MQ=255)
                                                                                                                                      cTTTTTGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAAATTCAGTTTCa       <  1:33200/148‑1 (MQ=255)
                                                                                                                                        ttttGCTTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAAATTCAGTTTCAAc     <  1:250779/148‑1 (MQ=255)
                                                                                                                                           tGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAAATTCAGTTTCAACAGt  >  2:913280/1‑148 (MQ=255)
                                                                                                                                           tGCCTTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAAATTCAGTTTCAACAGt  >  2:1382622/1‑148 (MQ=255)
                                                                                                                                               |                                                                                                                                               
CAATAAGTAATTTCCAAGTTATATTACTTATTGTGATTATTTTACCTAAGACAGTAGGAGTTATTTATAACTTAAAATTTATCCTGCCGAGGCTAAAATTGACTTGAACGTGATGATCTATGATCTTTCAAGCACTTTTTGCCGTGGGTAGAAAGTGCTTTTTTTATTAATTTTAAAAAAAGCACCAAAAATTTAAATGGAGGTGTCTGAATGTCTGCTATCATTGAAGCTAAAAAACAACTAGTTGATGAAATTGCTGAGGTACTATCAAATTCAGTTTCAACAGT  >  CP000730/583978‑584264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑