| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 2870578 | 55 (0.930) | 4 (0.070) | 4/248 | NT | 7.0% | intergenic (‑46/+21) | gidA/mnmE | glucose inhibited division protein A/GTP‑binding protein |
| ? | CP000730 | = 2870582 | 54 (0.960) | intergenic (‑50/+17) | gidA/mnmE | glucose inhibited division protein A/GTP‑binding protein | |||||
CATTAATGTTTTAGCACCACGTCTTGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2870437‑2870578‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agacggAATACCGTCTTAAGAAGGCTAGTAAGATATCAAATAAGGAGGTTTATATTGTGGTTCAAGAATATGATGTAATCGTTATAGGTGCGGGACATGCAGGTGTAGAAGCAGGTTTAGCATCTGCAAGACGTGGTGCTAAA < CP000730/2870582‑2870446 CATTAATGTTTTAGCACCACGTCTTGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACG < 2:568849/141‑1 ATTAATGTTTTAGCACCACGTCTTGCAGATGCTAAACCTGCTTCTACCCCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGG < 1:552411/141‑1 ATTAATGTTTTAGCACCACGTCTTGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGG < 1:598862/141‑1 TGTTTTAGCACCACGTCTTGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGAATAC < 2:608733/141‑1 ATGTCCCGCACCTATAACGATTACATCATATTCTCGAACCACAATATAAACCTCCTACTTTGATCTCTTACTATCCTTCTTAAGACGGAATTCCGTCTTAAGAAGGCTAGTAGGAAATCAAACAAAGAGGTTTAAACTGTG > 1:613301/1‑141 ACCTATAACGATTACATCATATTCTTGGACCCCAATATAAACCTCCTTATTTGATATCTTACTAGACTTCTTAATCCGGAATACCGTCTTAAGAAGGATAGTAGGTTATCACATAAGGAGGATTATAACGTGGTTCAACAA > 2:216942/1‑141 ACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTTAAGAAGTCTAGTAAGATATCAAATACGGAGGTTTAGATTATGGTTCAAGAA > 1:551414/1‑141 CACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGGTATTCCGTCTTAAGAAGGCTAGTAAGATATCAAATAAGGAGGTTTATATTGTGGTTCAAGAATATGATGTAATCGTTATAGGTGCGGGACAT < 2:613301/141‑1 gaacatGACGGAATACCGTCTGAAGAAGGCTAGTAAGATATCAAATAAGGAGGGTTATATTGTGGTTCAAGAATATGATGTAATCGTTATAGGTGCGGGACATGCAGGTGTAGAAGCAGGTTTAGCATCTGCAAGACGTGG < 1:266363/135‑1 cCGGAATACCGTCTTAAGAAGGCTAGTAAGATATCAAATAAGGAGGTTTATATTGTGGTTCAAGAATATGATGTAATCGTTATAGGTGCGGGACATGCAGGTGTAGAAGCAGGTTTAGCATCTGCAAGACGTGGTGCTAAA < 1:390895/140‑1 ACGGAATACCGTCTTAAGAAGGCTAGTAAGATATCAAATAAGGAGGTTTATATTGTGGTTCAAGAATATGATGTAATCGTTATAGGTGCGGGACATGCAGGTGTAGAAGCAGGTTTAGCATCTGCAAGACGTGGTGCTAAA < 1:10587/141‑1 CATTAATGTTTTAGCACCACGTCTTGCAGATGCTAAACCTGCTTCTACACCTGCATGTCCCGCACCTATAACGATTACATCATATTCTTGAACCACAATATAAACCTCCTTATTTGATATCTTACTAGCCTTCTTAAGACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/2870437‑2870578‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agacggAATACCGTCTTAAGAAGGCTAGTAAGATATCAAATAAGGAGGTTTATATTGTGGTTCAAGAATATGATGTAATCGTTATAGGTGCGGGACATGCAGGTGTAGAAGCAGGTTTAGCATCTGCAAGACGTGGTGCTAAA < CP000730/2870582‑2870446 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |